RNA–Protein interactions for RNA: ENST00000446046.5

FN1-212, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-212ENST00000446046 KRT71Q3SY84 523 aa12.67□□□□□ -0.38
FN1-212ENST00000446046 DNAAF3Q8N9W5 541 aa12.67□□□□□ -0.38
FN1-212ENST00000446046 MID2Q9UJV3 735 aa12.67□□□□□ -0.38
FN1-212ENST00000446046 KDM6AO15550 1401 aaPredicted RBP12.67□□□□□ -0.38
FN1-212ENST00000446046 DIP2AQ14689 1571 aa12.67□□□□□ -0.38
FN1-212ENST00000446046 ABCB11O95342 1321 aa12.67□□□□□ -0.38
FN1-212ENST00000446046 GDF11O95390 407 aa12.67□□□□□ -0.38
FN1-212ENST00000446046 E2F5Q15329 346 aa12.67□□□□□ -0.38
FN1-212ENST00000446046 PCDHB8Q9UN66 801 aa12.67□□□□□ -0.38
FN1-212ENST00000446046 NDUFAB1O14561 156 aa12.67□□□□□ -0.38
FN1-212ENST00000446046 STX2P32856 288 aa12.67□□□□□ -0.38
FN1-212ENST00000446046 THOC5Q13769 683 aaKnown RBP12.67□□□□□ -0.38
FN1-212ENST00000446046 MTERF2Q49AM1 385 aa12.67□□□□□ -0.38
FN1-212ENST00000446046 LRRC31Q6UY01 552 aa12.67□□□□□ -0.38
FN1-212ENST00000446046 TBCKQ8TEA7 893 aa12.67□□□□□ -0.38
FN1-212ENST00000446046 Q9H521 79 aa12.67□□□□□ -0.38
FN1-212ENST00000446046 SLC39A2Q9NP94 309 aa12.67□□□□□ -0.38
FN1-212ENST00000446046 ZNF212Q9UDV6 495 aa12.67□□□□□ -0.38
FN1-212ENST00000446046 CPP00450 1065 aa12.66□□□□□ -0.38
FN1-212ENST00000446046 MMP14P50281 582 aa12.66□□□□□ -0.38
FN1-212ENST00000446046 WHAMMP3Q1A5X7 153 aa12.66□□□□□ -0.38
FN1-212ENST00000446046 CNOT6LQ96LI5 555 aaKnown RBP12.66□□□□□ -0.38
FN1-212ENST00000446046 ARHGEF40Q8TER5 1519 aa12.66□□□□□ -0.38
FN1-212ENST00000446046 POLR2FP61218 127 aaKnown RBP12.66□□□□□ -0.38
FN1-212ENST00000446046 COG7P83436 770 aa12.66□□□□□ -0.38
FN1-212ENST00000446046 MAGEB5Q9BZ81 275 aa12.66□□□□□ -0.38
FN1-212ENST00000446046 SLC13A4Q9UKG4 626 aa12.66□□□□□ -0.38
FN1-212ENST00000446046 MAD1L1Q9Y6D9 718 aa12.66□□□□□ -0.38
FN1-212ENST00000446046 ABCA6Q8N139 1617 aa12.66□□□□□ -0.38
FN1-212ENST00000446046 MIGA2Q7L4E1 593 aa12.66□□□□□ -0.38
FN1-212ENST00000446046 KLHL7Q8IXQ5 586 aa12.66□□□□□ -0.38
FN1-212ENST00000446046 CCDC170Q8IYT3 715 aa12.66□□□□□ -0.38
FN1-212ENST00000446046 TRERF1Q96PN7 1200 aa12.66□□□□□ -0.38
FN1-212ENST00000446046 CLDN3O15551 220 aa12.66□□□□□ -0.38
FN1-212ENST00000446046 MGEA5O60502 916 aa12.66□□□□□ -0.38
FN1-212ENST00000446046 TSTA3Q13630 321 aaPredicted RBP12.66□□□□□ -0.38
FN1-212ENST00000446046 RCSD1Q6JBY9 416 aa12.66□□□□□ -0.38
FN1-212ENST00000446046 RFX6Q8HWS3 928 aa12.66□□□□□ -0.38
FN1-212ENST00000446046 NSUN6Q8TEA1 469 aaKnown RBP12.66□□□□□ -0.38
FN1-212ENST00000446046 PPLO60437 1756 aa12.66□□□□□ -0.38
FN1-212ENST00000446046 ASB14A6NK59 587 aa12.66□□□□□ -0.38
FN1-212ENST00000446046 TRAPPC3O43617 180 aa12.66□□□□□ -0.38
FN1-212ENST00000446046 ZNF18P17022 549 aa12.66□□□□□ -0.38
FN1-212ENST00000446046 MXD3Q9BW11 206 aa12.66□□□□□ -0.38
FN1-212ENST00000446046 ATP6V0A4Q9HBG4 840 aa12.66□□□□□ -0.38
FN1-212ENST00000446046 SYNJ2BP-COX16A0A087WUM0 186 aa12.66□□□□□ -0.38
FN1-212ENST00000446046 MAN2A1Q16706 1144 aa12.66□□□□□ -0.38
FN1-212ENST00000446046 BRINP3Q76B58 766 aa12.66□□□□□ -0.38
FN1-212ENST00000446046 BRIP1Q9BX63 1249 aa12.66□□□□□ -0.38
FN1-212ENST00000446046 COX16Q9P0S2 106 aa12.66□□□□□ -0.38
FN1-212ENST00000446046 MARK3P27448 753 aa12.65□□□□□ -0.38
FN1-212ENST00000446046 LIFRP42702 1097 aa12.65□□□□□ -0.38
FN1-212ENST00000446046 KRT76Q01546 638 aa12.65□□□□□ -0.38
FN1-212ENST00000446046 TAF11Q15544 211 aa12.65□□□□□ -0.38
FN1-212ENST00000446046 ARHGEF18Q6ZSZ5 1173 aa12.65□□□□□ -0.38
FN1-212ENST00000446046 ATP6V1E2Q96A05 226 aa12.65□□□□□ -0.38
FN1-212ENST00000446046 PDIA3P30101 505 aaKnown RBP12.65□□□□□ -0.38
FN1-212ENST00000446046 IFNA8P32881 189 aa12.65□□□□□ -0.38
FN1-212ENST00000446046 ADD1P35611 737 aaKnown RBP12.65□□□□□ -0.38
FN1-212ENST00000446046 ATP6V1E1P36543 226 aa12.65□□□□□ -0.38
FN1-212ENST00000446046 PSMD6Q15008 389 aa12.65□□□□□ -0.38
FN1-212ENST00000446046 POLR3EQ9NVU0 708 aa12.65□□□□□ -0.38
FN1-212ENST00000446046 HUS1O60921 280 aa12.65□□□□□ -0.38
FN1-212ENST00000446046 KRT39Q6A163 491 aa12.65□□□□□ -0.38
FN1-212ENST00000446046 STRIP2Q9ULQ0 834 aa12.65□□□□□ -0.38
FN1-212ENST00000446046 MBD5Q9P267 1494 aa12.65□□□□□ -0.38
FN1-212ENST00000446046 SH3BGRP55822 239 aaPredicted RBP12.65□□□□□ -0.38
FN1-212ENST00000446046 APOA5Q6Q788 366 aa12.65□□□□□ -0.38
FN1-212ENST00000446046 SKAP1Q86WV1 359 aa12.65□□□□□ -0.38
FN1-212ENST00000446046 MICALL1Q8N3F8 863 aa12.65□□□□□ -0.38
FN1-212ENST00000446046 TUBGCP2Q9BSJ2 902 aa12.65□□□□□ -0.38
FN1-212ENST00000446046 FAN1Q9Y2M0 1017 aa12.65□□□□□ -0.38
FN1-212ENST00000446046 SEL1LQ9UBV2 794 aa12.65□□□□□ -0.38
FN1-212ENST00000446046 TMCC1O94876 653 aa12.65□□□□□ -0.39
FN1-212ENST00000446046 TBXAS1P24557 533 aaPredicted RBP12.65□□□□□ -0.39
FN1-212ENST00000446046 SEMA3FQ13275 785 aa12.65□□□□□ -0.39
FN1-212ENST00000446046 ZNF658Q5TYW1 1059 aaPredicted RBP12.65□□□□□ -0.39
FN1-212ENST00000446046 YAF2Q8IY57 180 aa12.65□□□□□ -0.39
FN1-212ENST00000446046 CMTR1Q8N1G2 835 aaKnown RBP12.65□□□□□ -0.39
FN1-212ENST00000446046 MSTO1Q9BUK6 570 aa12.65□□□□□ -0.39
FN1-212ENST00000446046 ZNF335Q9H4Z2 1342 aaPredicted RBP12.65□□□□□ -0.39
FN1-212ENST00000446046 USP32Q8NFA0 1604 aa12.65□□□□□ -0.39
FN1-212ENST00000446046 PRPF3O43395 683 aaKnown RBP12.64□□□□□ -0.39
FN1-212ENST00000446046 ZNF445P59923 1031 aa12.64□□□□□ -0.39
FN1-212ENST00000446046 CEP57Q86XR8 500 aa12.64□□□□□ -0.39
FN1-212ENST00000446046 POLIQ9UNA4 740 aa12.64□□□□□ -0.39
FN1-212ENST00000446046 TTC4O95801 387 aa12.64□□□□□ -0.39
FN1-212ENST00000446046 RAB42Q8N4Z0 105 aa12.64□□□□□ -0.39
FN1-212ENST00000446046 CEP120Q8N960 986 aa12.64□□□□□ -0.39
FN1-212ENST00000446046 CHMP6Q96FZ7 201 aa12.64□□□□□ -0.39
FN1-212ENST00000446046 MTRQ99707 1265 aa12.64□□□□□ -0.39
FN1-212ENST00000446046 MMTAG2Q9BU76 263 aaKnown RBP12.64□□□□□ -0.39
FN1-212ENST00000446046 HAUS4Q9H6D7 363 aa12.64□□□□□ -0.39
FN1-212ENST00000446046 SCINQ9Y6U3 715 aa12.64□□□□□ -0.39
FN1-212ENST00000446046 TOGARAM2Q6ZUX3 1019 aa12.64□□□□□ -0.39
FN1-212ENST00000446046 NOP9Q86U38 636 aaKnown RBP12.64□□□□□ -0.39
FN1-212ENST00000446046 SP8Q8IXZ3 490 aa12.64□□□□□ -0.39
FN1-212ENST00000446046 NUDCD1Q96RS6 583 aa12.64□□□□□ -0.39
FN1-212ENST00000446046 KIAA1755Q5JYT7 1200 aa12.64□□□□□ -0.39
FN1-212ENST00000446046 RNF10Q8N5U6 811 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms