RNA–Protein interactions for RNA: ENST00000445497.1

UBBP3-201, Transcript of ubiquitin B pseudogene 3, humanhuman

BASIC

Gene UBBP3, Length 241 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP3-201ENST00000445497 FKBPLQ9UIM3 349 aa3.09□□□□□ -1.91
UBBP3-201ENST00000445497 HOOK1Q9UJC3 728 aaKnown RBP3.09□□□□□ -1.91
UBBP3-201ENST00000445497 DOLKQ9UPQ8 538 aa3.09□□□□□ -1.91
UBBP3-201ENST00000445497 KIAA1024Q9UPX6 916 aa3.09□□□□□ -1.91
UBBP3-201ENST00000445497 PTPN22Q9Y2R2 807 aa3.09□□□□□ -1.91
UBBP3-201ENST00000445497 TMED5Q9Y3A6 229 aa3.09□□□□□ -1.91
UBBP3-201ENST00000445497 JRKLQ9Y4A0 524 aa3.09□□□□□ -1.91
UBBP3-201ENST00000445497 SESN1Q9Y6P5 492 aa3.09□□□□□ -1.91
UBBP3-201ENST00000445497 AP1M2Q9Y6Q5 423 aa3.09□□□□□ -1.91
UBBP3-201ENST00000445497 SPAG9O60271 1321 aaKnown RBP3.09□□□□□ -1.91
UBBP3-201ENST00000445497 LCHNA4D1U4 455 aa3.08□□□□□ -1.92
UBBP3-201ENST00000445497 PSDA5PKW4 1024 aaPredicted RBP3.08□□□□□ -1.92
UBBP3-201ENST00000445497 ESPNB1AK53 854 aa3.08□□□□□ -1.92
UBBP3-201ENST00000445497 POTECB2RU33 542 aa3.08□□□□□ -1.92
UBBP3-201ENST00000445497 GOLGA6L19H0YKK7 550 aa3.08□□□□□ -1.92
UBBP3-201ENST00000445497 DDX39AO00148 427 aaKnown RBP3.08□□□□□ -1.92
UBBP3-201ENST00000445497 EYA2O00167 538 aa3.08□□□□□ -1.92
UBBP3-201ENST00000445497 TULP2O00295 520 aa3.08□□□□□ -1.92
UBBP3-201ENST00000445497 ENC1O14682 589 aa3.08□□□□□ -1.92
UBBP3-201ENST00000445497 CAPN9O14815 690 aa3.08□□□□□ -1.92
UBBP3-201ENST00000445497 IRAK2O43187 625 aa3.08□□□□□ -1.92
UBBP3-201ENST00000445497 TXNL1O43396 289 aa3.08□□□□□ -1.92
UBBP3-201ENST00000445497 ZNF254O75437 659 aa3.08□□□□□ -1.92
UBBP3-201ENST00000445497 TRPA1O75762 1119 aa3.08□□□□□ -1.92
UBBP3-201ENST00000445497 GLRX3O76003 335 aaKnown RBP3.08□□□□□ -1.92
UBBP3-201ENST00000445497 DLGAP3O95886 979 aa3.08□□□□□ -1.92
UBBP3-201ENST00000445497 ZBED1O96006 694 aa3.08□□□□□ -1.92
UBBP3-201ENST00000445497 RPLP1P05386 114 aaKnown RBP3.08□□□□□ -1.92
UBBP3-201ENST00000445497 USP17L7P0C7H9 530 aa3.08□□□□□ -1.92
UBBP3-201ENST00000445497 DLATP10515 647 aaKnown RBP3.08□□□□□ -1.92
UBBP3-201ENST00000445497 TOP1P11387 765 aaKnown RBP3.08□□□□□ -1.92
UBBP3-201ENST00000445497 ZNF24P17028 368 aa3.08□□□□□ -1.92
UBBP3-201ENST00000445497 TFEBP19484 476 aa3.08□□□□□ -1.92
UBBP3-201ENST00000445497 IL10P22301 178 aa3.08□□□□□ -1.92
UBBP3-201ENST00000445497 KCNA5P22460 613 aa3.08□□□□□ -1.92
UBBP3-201ENST00000445497 MAPK3P27361 379 aaPredicted RBP3.08□□□□□ -1.92
UBBP3-201ENST00000445497 GBP2P32456 591 aaPredicted RBP3.08□□□□□ -1.92
UBBP3-201ENST00000445497 MCM4P33991 863 aa3.08□□□□□ -1.92
UBBP3-201ENST00000445497 ABCG1P45844 678 aa3.08□□□□□ -1.92
UBBP3-201ENST00000445497 NOP2P46087 812 aaKnown RBP3.08□□□□□ -1.92
UBBP3-201ENST00000445497 GIPRP48546 466 aa3.08□□□□□ -1.92
UBBP3-201ENST00000445497 SEPHS1P49903 392 aa3.08□□□□□ -1.92
UBBP3-201ENST00000445497 PEX5P50542 639 aa3.08□□□□□ -1.92
UBBP3-201ENST00000445497 TKTL1P51854 596 aa3.08□□□□□ -1.92
UBBP3-201ENST00000445497 CDR1P51861 262 aa3.08□□□□□ -1.92
UBBP3-201ENST00000445497 ARL4CP56559 192 aa3.08□□□□□ -1.92
UBBP3-201ENST00000445497 C21orf58P58505 322 aa3.08□□□□□ -1.92
UBBP3-201ENST00000445497 POLR2FP61218 127 aaKnown RBP3.08□□□□□ -1.92
UBBP3-201ENST00000445497 HAND2P61296 217 aa3.08□□□□□ -1.92
UBBP3-201ENST00000445497 DCAF7P61962 342 aa3.08□□□□□ -1.92
UBBP3-201ENST00000445497 IL1RL1Q01638 556 aa3.08□□□□□ -1.92
UBBP3-201ENST00000445497 ICA1Q05084 483 aa3.08□□□□□ -1.92
UBBP3-201ENST00000445497 AP1B1Q10567 949 aa3.08□□□□□ -1.92
UBBP3-201ENST00000445497 SNAPC2Q13487 334 aa3.08□□□□□ -1.92
UBBP3-201ENST00000445497 CUL4BQ13620 913 aa3.08□□□□□ -1.92
UBBP3-201ENST00000445497 GRIN2CQ14957 1233 aa3.08□□□□□ -1.92
UBBP3-201ENST00000445497 RBBP5Q15291 538 aaKnown RBP3.08□□□□□ -1.92
UBBP3-201ENST00000445497 ASIC2Q16515 512 aa3.08□□□□□ -1.92
UBBP3-201ENST00000445497 SLC10A6Q3KNW5 377 aa3.08□□□□□ -1.92
UBBP3-201ENST00000445497 C2orf76Q3KRA6 126 aa3.08□□□□□ -1.92
UBBP3-201ENST00000445497 KBTBD12Q3ZCT8 623 aa3.08□□□□□ -1.92
UBBP3-201ENST00000445497 CCDC38Q502W7 563 aa3.08□□□□□ -1.92
UBBP3-201ENST00000445497 TDRD12Q587J7 1177 aaKnown RBP3.08□□□□□ -1.92
UBBP3-201ENST00000445497 ZBTB41Q5SVQ8 909 aa3.08□□□□□ -1.92
UBBP3-201ENST00000445497 CCDC183Q5T5S1 534 aa3.08□□□□□ -1.92
UBBP3-201ENST00000445497 HEATR6Q6AI08 1181 aaKnown RBP3.08□□□□□ -1.92
UBBP3-201ENST00000445497 CYB5RLQ6IPT4 315 aa3.08□□□□□ -1.92
UBBP3-201ENST00000445497 CNNM4Q6P4Q7 775 aa3.08□□□□□ -1.92
UBBP3-201ENST00000445497 KLC3Q6P597 504 aa3.08□□□□□ -1.92
UBBP3-201ENST00000445497 ALKBH5Q6P6C2 394 aaKnown RBP3.08□□□□□ -1.92
UBBP3-201ENST00000445497 DRICH1Q6PGQ1 229 aaPredicted RBP3.08□□□□□ -1.92
UBBP3-201ENST00000445497 TRAF7Q6Q0C0 670 aa3.08□□□□□ -1.92
UBBP3-201ENST00000445497 BNC2Q6ZN30 1099 aaPredicted RBP3.08□□□□□ -1.92
UBBP3-201ENST00000445497 C15orf52Q6ZUT6 534 aaKnown RBP3.08□□□□□ -1.92
UBBP3-201ENST00000445497 BNIPLQ7Z465 357 aa3.08□□□□□ -1.92
UBBP3-201ENST00000445497 SPATA2LQ8IUW3 424 aaPredicted RBP3.08□□□□□ -1.92
UBBP3-201ENST00000445497 RPAP2Q8IXW5 612 aaPredicted RBP3.08□□□□□ -1.92
UBBP3-201ENST00000445497 CCDC170Q8IYT3 715 aa3.08□□□□□ -1.92
UBBP3-201ENST00000445497 CRACR2BQ8N4Y2 399 aaPredicted RBP3.08□□□□□ -1.92
UBBP3-201ENST00000445497 AVL9Q8NBF6 648 aa3.08□□□□□ -1.92
UBBP3-201ENST00000445497 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.08□□□□□ -1.92
UBBP3-201ENST00000445497 SUPT20HQ8NEM7 779 aa3.08□□□□□ -1.92
UBBP3-201ENST00000445497 FAM216AQ8WUB2 273 aa3.08□□□□□ -1.92
UBBP3-201ENST00000445497 TRAPPC12Q8WVT3 735 aa3.08□□□□□ -1.92
UBBP3-201ENST00000445497 DDX1Q92499 740 aaKnown RBP3.08□□□□□ -1.92
UBBP3-201ENST00000445497 USP7Q93009 1102 aa3.08□□□□□ -1.92
UBBP3-201ENST00000445497 RBM33Q96EV2 1170 aaKnown RBP3.08□□□□□ -1.92
UBBP3-201ENST00000445497 EAF1Q96JC9 268 aaPredicted RBP3.08□□□□□ -1.92
UBBP3-201ENST00000445497 CNDP1Q96KN2 507 aa3.08□□□□□ -1.92
UBBP3-201ENST00000445497 TMEM74Q96NL1 305 aa3.08□□□□□ -1.92
UBBP3-201ENST00000445497 SAMD11Q96NU1 681 aa3.08□□□□□ -1.92
UBBP3-201ENST00000445497 CITED2Q99967 270 aaPredicted RBP3.08□□□□□ -1.92
UBBP3-201ENST00000445497 TCF25Q9BQ70 676 aa3.08□□□□□ -1.92
UBBP3-201ENST00000445497 NOL10Q9BSC4 688 aaKnown RBP3.08□□□□□ -1.92
UBBP3-201ENST00000445497 TBCDQ9BTW9 1192 aa3.08□□□□□ -1.92
UBBP3-201ENST00000445497 DHRS4Q9BTZ2 278 aa3.08□□□□□ -1.92
UBBP3-201ENST00000445497 SPATA9Q9BWV2 254 aa3.08□□□□□ -1.92
UBBP3-201ENST00000445497 NAA15Q9BXJ9 866 aaKnown RBP3.08□□□□□ -1.92
UBBP3-201ENST00000445497 TEX13BQ9BXU2 312 aa3.08□□□□□ -1.92
UBBP3-201ENST00000445497 NSRP1Q9H0G5 558 aaKnown RBP3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms