RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 TTBK2Q6IQ55 1244 aa20.1■□□□□ 0.81
SHANK3-203ENST00000445220 HDAC11Q96DB2 347 aa20.1■□□□□ 0.81
SHANK3-203ENST00000445220 HAUS2Q9NVX0 235 aa20.1■□□□□ 0.81
SHANK3-203ENST00000445220 HNRNPCP07910 306 aaKnown RBP eCLIP20.09■□□□□ 0.81
SHANK3-203ENST00000445220 MRPS25P82663 173 aaKnown RBP20.09■□□□□ 0.81
SHANK3-203ENST00000445220 SLC30A9Q6PML9 568 aa20.09■□□□□ 0.81
SHANK3-203ENST00000445220 NSMFQ6X4W1 530 aa20.09■□□□□ 0.81
SHANK3-203ENST00000445220 WDR17Q8IZU2 1322 aa20.09■□□□□ 0.81
SHANK3-203ENST00000445220 WDR91A4D1P6 747 aa20.09■□□□□ 0.81
SHANK3-203ENST00000445220 ART3Q13508 389 aa20.09■□□□□ 0.81
SHANK3-203ENST00000445220 PDZD4Q76G19 769 aaPredicted RBP20.09■□□□□ 0.81
SHANK3-203ENST00000445220 GSPT2Q8IYD1 628 aaKnown RBP20.09■□□□□ 0.81
SHANK3-203ENST00000445220 AZI2Q9H6S1 392 aa20.09■□□□□ 0.81
SHANK3-203ENST00000445220 ABHD10Q9NUJ1 306 aa20.09■□□□□ 0.81
SHANK3-203ENST00000445220 DIS3Q9Y2L1 958 aaKnown RBP20.09■□□□□ 0.81
SHANK3-203ENST00000445220 TET3O43151 1660 aa20.09■□□□□ 0.81
SHANK3-203ENST00000445220 GABPAQ06546 454 aa20.09■□□□□ 0.81
SHANK3-203ENST00000445220 MAP7D3Q8IWC1 876 aa20.09■□□□□ 0.81
SHANK3-203ENST00000445220 THOC1Q96FV9 657 aaKnown RBP20.09■□□□□ 0.81
SHANK3-203ENST00000445220 K7ENM7 598 aa20.09■□□□□ 0.81
SHANK3-203ENST00000445220 RSPH3Q86UC2 560 aa20.09■□□□□ 0.81
SHANK3-203ENST00000445220 OSBPL9Q96SU4 736 aa20.09■□□□□ 0.81
SHANK3-203ENST00000445220 ECT2Q9H8V3 914 aa20.09■□□□□ 0.81
SHANK3-203ENST00000445220 ETNK1Q9HBU6 452 aa20.09■□□□□ 0.81
SHANK3-203ENST00000445220 ZFP69BQ9UJL9 534 aa20.09■□□□□ 0.81
SHANK3-203ENST00000445220 LEMD3Q9Y2U8 911 aa20.09■□□□□ 0.81
SHANK3-203ENST00000445220 PTCH1Q13635 1447 aa20.09■□□□□ 0.81
SHANK3-203ENST00000445220 TARSL2A2RTX5 802 aaKnown RBP20.08■□□□□ 0.81
SHANK3-203ENST00000445220 IPO5O00410 1097 aaKnown RBP20.08■□□□□ 0.81
SHANK3-203ENST00000445220 ACSL3O95573 720 aa20.08■□□□□ 0.81
SHANK3-203ENST00000445220 ECE1P42892 770 aa20.08■□□□□ 0.81
SHANK3-203ENST00000445220 ARHGAP27Q6ZUM4 889 aa20.08■□□□□ 0.81
SHANK3-203ENST00000445220 CPXCR1Q8N123 301 aa20.08■□□□□ 0.81
SHANK3-203ENST00000445220 SMCR8Q8TEV9 937 aaPredicted RBP20.08■□□□□ 0.81
SHANK3-203ENST00000445220 TRIM56Q9BRZ2 755 aaKnown RBP20.08■□□□□ 0.81
SHANK3-203ENST00000445220 PSTPIP2Q9H939 334 aa20.08■□□□□ 0.81
SHANK3-203ENST00000445220 VIPAS39Q9H9C1 493 aa20.08■□□□□ 0.81
SHANK3-203ENST00000445220 ERBB3P21860 1342 aa20.08■□□□□ 0.81
SHANK3-203ENST00000445220 GNGT2O14610 69 aa20.08■□□□□ 0.81
SHANK3-203ENST00000445220 TOM1L1O75674 476 aa20.08■□□□□ 0.81
SHANK3-203ENST00000445220 MUM1L1Q5H9M0 696 aa20.08■□□□□ 0.81
SHANK3-203ENST00000445220 NLRX1Q86UT6 975 aa20.08■□□□□ 0.81
SHANK3-203ENST00000445220 GPKOWQ92917 476 aaPredicted RBP eCLIP20.08■□□□□ 0.81
SHANK3-203ENST00000445220 CCDC124Q96CT7 223 aaKnown RBP20.08■□□□□ 0.81
SHANK3-203ENST00000445220 NDST4Q9H3R1 872 aa20.08■□□□□ 0.81
SHANK3-203ENST00000445220 PSD3Q9NYI0 1048 aa20.08■□□□□ 0.81
SHANK3-203ENST00000445220 ATF5Q9Y2D1 282 aaPredicted RBP20.08■□□□□ 0.81
SHANK3-203ENST00000445220 MMP1P03956 469 aa20.08■□□□□ 0.8
SHANK3-203ENST00000445220 FBXW10Q5XX13 1052 aa20.08■□□□□ 0.8
SHANK3-203ENST00000445220 PAGE5Q96GU1 130 aa20.08■□□□□ 0.8
SHANK3-203ENST00000445220 LRRC37BQ96QE4 947 aa20.08■□□□□ 0.8
SHANK3-203ENST00000445220 DDX25Q9UHL0 483 aaKnown RBP20.08■□□□□ 0.8
SHANK3-203ENST00000445220 SLC4A7Q9Y6M7 1214 aa20.08■□□□□ 0.8
SHANK3-203ENST00000445220 ADCY10Q96PN6 1610 aa20.08■□□□□ 0.8
SHANK3-203ENST00000445220 A0A0G2JND7 137 aa20.08■□□□□ 0.8
SHANK3-203ENST00000445220 PPIP5K2O43314 1243 aa20.08■□□□□ 0.8
SHANK3-203ENST00000445220 SAT1P21673 171 aa20.08■□□□□ 0.8
SHANK3-203ENST00000445220 MDM2Q00987 491 aaPredicted RBP20.08■□□□□ 0.8
SHANK3-203ENST00000445220 UPF3AQ9H1J1 476 aaKnown RBP20.08■□□□□ 0.8
SHANK3-203ENST00000445220 NUB1Q9Y5A7 615 aa20.08■□□□□ 0.8
SHANK3-203ENST00000445220 ADGRG1Q9Y653 693 aa20.08■□□□□ 0.8
SHANK3-203ENST00000445220 ZNF804BA4D1E1 1349 aa20.08■□□□□ 0.8
SHANK3-203ENST00000445220 SOS2Q07890 1332 aaPredicted RBP20.08■□□□□ 0.8
SHANK3-203ENST00000445220 MAN1A2O60476 641 aa20.07■□□□□ 0.8
SHANK3-203ENST00000445220 NR1H3Q13133 447 aa20.07■□□□□ 0.8
SHANK3-203ENST00000445220 IVNS1ABPQ9Y6Y0 642 aa20.07■□□□□ 0.8
SHANK3-203ENST00000445220 PRR36Q9H6K5 1346 aa20.07■□□□□ 0.8
SHANK3-203ENST00000445220 IL1RL1Q01638 556 aa20.07■□□□□ 0.8
SHANK3-203ENST00000445220 DPY19L2Q6NUT2 758 aa20.07■□□□□ 0.8
SHANK3-203ENST00000445220 ARMCX5Q6P1M9 558 aa20.07■□□□□ 0.8
SHANK3-203ENST00000445220 FGGP02679 453 aa20.07■□□□□ 0.8
SHANK3-203ENST00000445220 FAM182BQ5T319 152 aa20.07■□□□□ 0.8
SHANK3-203ENST00000445220 FAM47EQ6ZV65 393 aa20.07■□□□□ 0.8
SHANK3-203ENST00000445220 TMC4Q7Z404 712 aa20.07■□□□□ 0.8
SHANK3-203ENST00000445220 GFM2Q969S9 779 aaKnown RBP20.07■□□□□ 0.8
SHANK3-203ENST00000445220 MRPL11Q9Y3B7 192 aaKnown RBP20.07■□□□□ 0.8
SHANK3-203ENST00000445220 IQANK1A0A1B0GTG1 560 aa20.07■□□□□ 0.8
SHANK3-203ENST00000445220 NCF2P19878 526 aaPredicted RBP20.07■□□□□ 0.8
SHANK3-203ENST00000445220 CRKLP46109 303 aaKnown RBP20.07■□□□□ 0.8
SHANK3-203ENST00000445220 NT5C1BQ96P26 610 aa20.07■□□□□ 0.8
SHANK3-203ENST00000445220 PUS3Q9BZE2 481 aaKnown RBP20.07■□□□□ 0.8
SHANK3-203ENST00000445220 CPP00450 1065 aa20.06■□□□□ 0.8
SHANK3-203ENST00000445220 PSMC2P35998 433 aaKnown RBP20.06■□□□□ 0.8
SHANK3-203ENST00000445220 BTDP43251 543 aa20.06■□□□□ 0.8
SHANK3-203ENST00000445220 PLA2R1Q13018 1463 aa20.06■□□□□ 0.8
SHANK3-203ENST00000445220 TMEM232C9JQI7 657 aa20.06■□□□□ 0.8
SHANK3-203ENST00000445220 PPP1R37O75864 691 aa20.06■□□□□ 0.8
SHANK3-203ENST00000445220 MCF2P10911 925 aa20.06■□□□□ 0.8
SHANK3-203ENST00000445220 PLS3P13797 630 aa20.06■□□□□ 0.8
SHANK3-203ENST00000445220 ZNF589Q86UQ0 364 aaPredicted RBP20.06■□□□□ 0.8
SHANK3-203ENST00000445220 PPARGC1AQ9UBK2 798 aaKnown RBP20.06■□□□□ 0.8
SHANK3-203ENST00000445220 ZBBXA8MT70 800 aa20.06■□□□□ 0.8
SHANK3-203ENST00000445220 CFLARO15519 480 aa20.06■□□□□ 0.8
SHANK3-203ENST00000445220 TTI1O43156 1089 aa20.06■□□□□ 0.8
SHANK3-203ENST00000445220 HAUS5O94927 633 aa20.06■□□□□ 0.8
SHANK3-203ENST00000445220 BRINP3Q76B58 766 aa20.06■□□□□ 0.8
SHANK3-203ENST00000445220 NUDCD1Q96RS6 583 aa20.06■□□□□ 0.8
SHANK3-203ENST00000445220 CSRNP1Q96S65 589 aa20.06■□□□□ 0.8
SHANK3-203ENST00000445220 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.06■□□□□ 0.81e-6■■■■□ 24.5
SHANK3-203ENST00000445220 ADORA1P30542 326 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms