RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 ABHD15Q6UXT9 468 aa17■□□□□ 0.31
CCNE1-203ENST00000444983 ENGASEQ8NFI3 743 aa17■□□□□ 0.31
CCNE1-203ENST00000444983 RDM1Q8NG50 284 aa17■□□□□ 0.31
CCNE1-203ENST00000444983 MRPS27Q92552 414 aaKnown RBP17■□□□□ 0.31
CCNE1-203ENST00000444983 DISC1Q9NRI5 854 aa17■□□□□ 0.31
CCNE1-203ENST00000444983 FAM184BQ9ULE4 1060 aa17■□□□□ 0.31
CCNE1-203ENST00000444983 Q9Y3F1 56 aa17■□□□□ 0.31
CCNE1-203ENST00000444983 IGKV6D-21A0A0A0MT36 114 aa16.99■□□□□ 0.31
CCNE1-203ENST00000444983 A0A1B0GVL5 298 aa16.99■□□□□ 0.31
CCNE1-203ENST00000444983 GSTTP1A0A1W2PQM5 241 aa16.99■□□□□ 0.31
CCNE1-203ENST00000444983 GOLGA6L4A6NEF3 574 aa16.99■□□□□ 0.31
CCNE1-203ENST00000444983 SEPT4O43236 478 aa16.99■□□□□ 0.31
CCNE1-203ENST00000444983 CHMP2AO43633 222 aa16.99■□□□□ 0.31
CCNE1-203ENST00000444983 GH1P01241 217 aa16.99■□□□□ 0.31
CCNE1-203ENST00000444983 SPATA31C1P0DKV0 1188 aa16.99■□□□□ 0.31
CCNE1-203ENST00000444983 AKR1A1P14550 325 aa16.99■□□□□ 0.31
CCNE1-203ENST00000444983 JAK3P52333 1124 aa16.99■□□□□ 0.31
CCNE1-203ENST00000444983 ACTR2P61160 394 aa16.99■□□□□ 0.31
CCNE1-203ENST00000444983 SNW1Q13573 536 aaKnown RBP16.99■□□□□ 0.31
CCNE1-203ENST00000444983 LAMC2Q13753 1193 aa16.99■□□□□ 0.31
CCNE1-203ENST00000444983 EPHA7Q15375 998 aa16.99■□□□□ 0.31
CCNE1-203ENST00000444983 HYIQ5T013 277 aa16.99■□□□□ 0.31
CCNE1-203ENST00000444983 NCAPH2Q6IBW4 605 aa16.99■□□□□ 0.31
CCNE1-203ENST00000444983 CTU1Q7Z7A3 348 aaKnown RBP16.99■□□□□ 0.31
CCNE1-203ENST00000444983 DHX37Q8IY37 1157 aaKnown RBP16.99■□□□□ 0.31
CCNE1-203ENST00000444983 PCDHA10Q9Y5I2 948 aa16.99■□□□□ 0.31
CCNE1-203ENST00000444983 STK24Q9Y6E0 443 aa16.99■□□□□ 0.31
CCNE1-203ENST00000444983 A0A087X0B3 334 aa16.98■□□□□ 0.31
CCNE1-203ENST00000444983 WDR64B1ANS9 1081 aa16.98■□□□□ 0.31
CCNE1-203ENST00000444983 SLC26A4O43511 780 aa16.98■□□□□ 0.31
CCNE1-203ENST00000444983 SLITRK3O94933 977 aa16.98■□□□□ 0.31
CCNE1-203ENST00000444983 PFKFB1P16118 471 aa16.98■□□□□ 0.31
CCNE1-203ENST00000444983 RPA1P27694 616 aa16.98■□□□□ 0.31
CCNE1-203ENST00000444983 CCND3P30281 292 aaPredicted RBP16.98■□□□□ 0.31
CCNE1-203ENST00000444983 UBA7P41226 1012 aa16.98■□□□□ 0.31
CCNE1-203ENST00000444983 NDUFA8P51970 172 aa16.98■□□□□ 0.31
CCNE1-203ENST00000444983 ECM1Q16610 540 aa16.98■□□□□ 0.31
CCNE1-203ENST00000444983 CATSPER3Q86XQ3 398 aa16.98■□□□□ 0.31
CCNE1-203ENST00000444983 FSIP1Q8NA03 581 aa16.98■□□□□ 0.31
CCNE1-203ENST00000444983 GPT2Q8TD30 523 aa16.98■□□□□ 0.31
CCNE1-203ENST00000444983 GPR20Q99678 358 aa16.98■□□□□ 0.31
CCNE1-203ENST00000444983 EIF2AK1Q9BQI3 630 aaKnown RBP16.98■□□□□ 0.31
CCNE1-203ENST00000444983 POLR3CQ9BUI4 534 aaPredicted RBP16.98■□□□□ 0.31
CCNE1-203ENST00000444983 MLXIPQ9HAP2 919 aa16.98■□□□□ 0.31
CCNE1-203ENST00000444983 SORBS3O60504 671 aa16.97■□□□□ 0.31
CCNE1-203ENST00000444983 MED24O75448 989 aa16.97■□□□□ 0.31
CCNE1-203ENST00000444983 INHAP05111 366 aa16.97■□□□□ 0.31
CCNE1-203ENST00000444983 HOXD8P13378 290 aaPredicted RBP16.97■□□□□ 0.31
CCNE1-203ENST00000444983 NKX3-2P78367 333 aa16.97■□□□□ 0.31
CCNE1-203ENST00000444983 MIER3Q7Z3K6 550 aa16.97■□□□□ 0.31
CCNE1-203ENST00000444983 CABP7Q86V35 215 aa16.97■□□□□ 0.31
CCNE1-203ENST00000444983 FMR1NBQ8N0W7 255 aaPredicted RBP16.97■□□□□ 0.31
CCNE1-203ENST00000444983 PPTC7Q8NI37 304 aa16.97■□□□□ 0.31
CCNE1-203ENST00000444983 PNMA5Q96PV4 448 aa16.97■□□□□ 0.31
CCNE1-203ENST00000444983 KCNH3Q9ULD8 1083 aa16.97■□□□□ 0.31
CCNE1-203ENST00000444983 A6NJR5 290 aa16.97■□□□□ 0.31
CCNE1-203ENST00000444983 CTAGE5O15320 804 aa16.97■□□□□ 0.31
CCNE1-203ENST00000444983 DUSP11O75319 330 aaKnown RBP16.97■□□□□ 0.31
CCNE1-203ENST00000444983 LIG1P18858 919 aa16.97■□□□□ 0.31
CCNE1-203ENST00000444983 GRB10Q13322 594 aa16.97■□□□□ 0.31
CCNE1-203ENST00000444983 E2F4Q16254 413 aa16.97■□□□□ 0.31
CCNE1-203ENST00000444983 KRT79Q5XKE5 535 aa16.97■□□□□ 0.31
CCNE1-203ENST00000444983 HAUS3Q68CZ6 603 aa16.97■□□□□ 0.31
CCNE1-203ENST00000444983 ERMNQ8TAM6 284 aa16.97■□□□□ 0.31
CCNE1-203ENST00000444983 NEK9Q8TD19 979 aa16.97■□□□□ 0.31
CCNE1-203ENST00000444983 SNX29Q8TEQ0 813 aa16.97■□□□□ 0.31
CCNE1-203ENST00000444983 LRRC15Q8TF66 581 aa16.97■□□□□ 0.31
CCNE1-203ENST00000444983 SEPT1Q8WYJ6 367 aa16.97■□□□□ 0.31
CCNE1-203ENST00000444983 LENG1Q96BZ8 264 aaPredicted RBP16.97■□□□□ 0.31
CCNE1-203ENST00000444983 SPATA33Q96N06 139 aa16.97■□□□□ 0.31
CCNE1-203ENST00000444983 PCYT2Q99447 389 aa16.97■□□□□ 0.31
CCNE1-203ENST00000444983 FAM13BQ9NYF5 915 aa16.97■□□□□ 0.31
CCNE1-203ENST00000444983 RGL1Q9NZL6 768 aa16.97■□□□□ 0.31
CCNE1-203ENST00000444983 P4HBP07237 508 aaKnown RBP16.96■□□□□ 0.31
CCNE1-203ENST00000444983 SUPT20HL2P0C7V6 817 aa16.96■□□□□ 0.31
CCNE1-203ENST00000444983 MUTP22033 750 aa16.96■□□□□ 0.31
CCNE1-203ENST00000444983 FAM160A1Q05DH4 1040 aa16.96■□□□□ 0.31
CCNE1-203ENST00000444983 KARSQ15046 597 aaKnown RBP16.96■□□□□ 0.31
CCNE1-203ENST00000444983 NAALADL2Q58DX5 795 aa16.96■□□□□ 0.31
CCNE1-203ENST00000444983 TUFT1Q9NNX1 390 aa16.96■□□□□ 0.31
CCNE1-203ENST00000444983 WRAP73Q9P2S5 460 aaPredicted RBP16.96■□□□□ 0.31
CCNE1-203ENST00000444983 NR1I2O75469 434 aa16.95■□□□□ 0.3
CCNE1-203ENST00000444983 LGR5O75473 907 aa16.95■□□□□ 0.3
CCNE1-203ENST00000444983 PSAPP07602 524 aa16.95■□□□□ 0.3
CCNE1-203ENST00000444983 PTMSP20962 102 aa16.95■□□□□ 0.3
CCNE1-203ENST00000444983 PKN2Q16513 984 aaKnown RBP16.95■□□□□ 0.3
CCNE1-203ENST00000444983 TMEM119Q4V9L6 283 aa16.95■□□□□ 0.3
CCNE1-203ENST00000444983 FBXO46Q6PJ61 603 aaPredicted RBP16.95■□□□□ 0.3
CCNE1-203ENST00000444983 TLK2Q86UE8 772 aa16.95■□□□□ 0.3
CCNE1-203ENST00000444983 CCDC60Q8IWA6 550 aaPredicted RBP16.95■□□□□ 0.3
CCNE1-203ENST00000444983 KCTD17Q8N5Z5 321 aa16.95■□□□□ 0.3
CCNE1-203ENST00000444983 AFAP1L1Q8TED9 768 aa16.95■□□□□ 0.3
CCNE1-203ENST00000444983 SH3TC2Q8TF17 1288 aa16.95■□□□□ 0.3
CCNE1-203ENST00000444983 AFG1LQ8WV93 481 aa16.95■□□□□ 0.3
CCNE1-203ENST00000444983 DYDC2Q96IM9 177 aa16.95■□□□□ 0.3
CCNE1-203ENST00000444983 UPF3AQ9H1J1 476 aaKnown RBP16.95■□□□□ 0.3
CCNE1-203ENST00000444983 TCEAL9Q9UHQ7 104 aa16.95■□□□□ 0.3
CCNE1-203ENST00000444983 SAMM50Q9Y512 469 aa16.95■□□□□ 0.3
CCNE1-203ENST00000444983 MAFBQ9Y5Q3 323 aaPredicted RBP16.95■□□□□ 0.3
CCNE1-203ENST00000444983 BRCA2P51587 3418 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms