RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 TBCAO75347 108 aaKnown RBP17.38■□□□□ 0.37
SNX13-204ENST00000444712 DSG3P32926 999 aa17.38■□□□□ 0.37
SNX13-204ENST00000444712 CYP4A11Q02928 519 aa17.38■□□□□ 0.37
SNX13-204ENST00000444712 TBC1D8BQ0IIM8 1120 aa17.38■□□□□ 0.37
SNX13-204ENST00000444712 COG2Q14746 738 aa17.38■□□□□ 0.37
SNX13-204ENST00000444712 MAN2A1Q16706 1144 aa17.38■□□□□ 0.37
SNX13-204ENST00000444712 TSR1Q2NL82 804 aaKnown RBP17.38■□□□□ 0.37
SNX13-204ENST00000444712 TKFCQ3LXA3 575 aa17.38■□□□□ 0.37
SNX13-204ENST00000444712 RNF207Q6ZRF8 634 aa17.38■□□□□ 0.37
SNX13-204ENST00000444712 CPLX3Q8WVH0 158 aa17.38■□□□□ 0.37
SNX13-204ENST00000444712 NACC1Q96RE7 527 aa17.38■□□□□ 0.37
SNX13-204ENST00000444712 FHDC1Q9C0D6 1143 aaPredicted RBP17.38■□□□□ 0.37
SNX13-204ENST00000444712 PPP2R2CQ9Y2T4 447 aa17.38■□□□□ 0.37
SNX13-204ENST00000444712 COL4A3BPQ9Y5P4 624 aa17.38■□□□□ 0.37
SNX13-204ENST00000444712 UBIAD1Q9Y5Z9 338 aa17.38■□□□□ 0.37
SNX13-204ENST00000444712 ATP2A1O14983 1001 aa17.38■□□□□ 0.37
SNX13-204ENST00000444712 ARP10275 920 aa17.38■□□□□ 0.37
SNX13-204ENST00000444712 HIRAP54198 1017 aaPredicted RBP17.38■□□□□ 0.37
SNX13-204ENST00000444712 HMGCS2P54868 508 aa17.38■□□□□ 0.37
SNX13-204ENST00000444712 PSMC6P62333 389 aa17.38■□□□□ 0.37
SNX13-204ENST00000444712 ZCWPW2Q504Y3 356 aa17.38■□□□□ 0.37
SNX13-204ENST00000444712 MUM1L1Q5H9M0 696 aa17.38■□□□□ 0.37
SNX13-204ENST00000444712 B3GNT9Q6UX72 402 aa17.38■□□□□ 0.37
SNX13-204ENST00000444712 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.38■□□□□ 0.37
SNX13-204ENST00000444712 ATG4CQ96DT6 458 aa17.38■□□□□ 0.37
SNX13-204ENST00000444712 DYDC2Q96IM9 177 aa17.38■□□□□ 0.37
SNX13-204ENST00000444712 ERGIC2Q96RQ1 377 aa17.38■□□□□ 0.37
SNX13-204ENST00000444712 BHMT2Q9H2M3 363 aa17.38■□□□□ 0.37
SNX13-204ENST00000444712 JADE2Q9NQC1 790 aa17.38■□□□□ 0.37
SNX13-204ENST00000444712 ABHD10Q9NUJ1 306 aa17.38■□□□□ 0.37
SNX13-204ENST00000444712 COL20A1Q9P218 1284 aa17.38■□□□□ 0.37
SNX13-204ENST00000444712 ADAMTS5Q9UNA0 930 aa17.38■□□□□ 0.37
SNX13-204ENST00000444712 PTPRFP10586 1907 aa17.38■□□□□ 0.37
SNX13-204ENST00000444712 B4DLN1 442 aa17.37■□□□□ 0.37
SNX13-204ENST00000444712 CHMP2AO43633 222 aa17.37■□□□□ 0.37
SNX13-204ENST00000444712 SLITRK3O94933 977 aa17.37■□□□□ 0.37
SNX13-204ENST00000444712 CCDC175P0C221 793 aa17.37■□□□□ 0.37
SNX13-204ENST00000444712 FXR1P51114 621 aaKnown RBP eCLIP17.37■□□□□ 0.37
SNX13-204ENST00000444712 RPS6P62753 249 aaKnown RBP17.37■□□□□ 0.37
SNX13-204ENST00000444712 EDRF1Q3B7T1 1238 aa17.37■□□□□ 0.37
SNX13-204ENST00000444712 FIGNQ5HY92 759 aa17.37■□□□□ 0.37
SNX13-204ENST00000444712 CYP26C1Q6V0L0 522 aa17.37■□□□□ 0.37
SNX13-204ENST00000444712 TPH2Q8IWU9 490 aa17.37■□□□□ 0.37
SNX13-204ENST00000444712 DCPSQ96C86 337 aaKnown RBP17.37■□□□□ 0.37
SNX13-204ENST00000444712 REEP2Q9BRK0 252 aa17.37■□□□□ 0.37
SNX13-204ENST00000444712 UNC45AQ9H3U1 944 aa17.37■□□□□ 0.37
SNX13-204ENST00000444712 HOMER2Q9NSB8 354 aa17.37■□□□□ 0.37
SNX13-204ENST00000444712 TBC1D22BQ9NU19 505 aa17.37■□□□□ 0.37
SNX13-204ENST00000444712 LUC7L2Q9Y383 392 aaKnown RBP17.37■□□□□ 0.37
SNX13-204ENST00000444712 MYH11P35749 1972 aa17.37■□□□□ 0.37
SNX13-204ENST00000444712 OTOFQ9HC10 1997 aa17.37■□□□□ 0.37
SNX13-204ENST00000444712 SOCS7O14512 581 aa17.37■□□□□ 0.37
SNX13-204ENST00000444712 DGKZQ13574 1117 aa17.37■□□□□ 0.37
SNX13-204ENST00000444712 LRRC41Q15345 812 aa17.37■□□□□ 0.37
SNX13-204ENST00000444712 VWA3BQ502W6 1294 aa17.37■□□□□ 0.37
SNX13-204ENST00000444712 SH3D19Q5HYK7 790 aa17.37■□□□□ 0.37
SNX13-204ENST00000444712 PRAMEF18Q5VWM3 479 aa17.37■□□□□ 0.37
SNX13-204ENST00000444712 LRRC55Q6ZSA7 311 aa17.37■□□□□ 0.37
SNX13-204ENST00000444712 ZHX3Q9H4I2 956 aa17.37■□□□□ 0.37
SNX13-204ENST00000444712 KCNH7Q9NS40 1196 aa17.37■□□□□ 0.37
SNX13-204ENST00000444712 RNF146Q9NTX7 359 aa17.37■□□□□ 0.37
SNX13-204ENST00000444712 HOXC10Q9NYD6 342 aa17.37■□□□□ 0.37
SNX13-204ENST00000444712 RGL1Q9NZL6 768 aa17.37■□□□□ 0.37
SNX13-204ENST00000444712 CAPN11Q9UMQ6 739 aa17.37■□□□□ 0.37
SNX13-204ENST00000444712 NPHP3-ACAD11A0A0J9YXS1 232 aa17.36■□□□□ 0.37
SNX13-204ENST00000444712 ITGB5P18084 799 aa17.36■□□□□ 0.37
SNX13-204ENST00000444712 KRT9P35527 623 aa17.36■□□□□ 0.37
SNX13-204ENST00000444712 CTTNQ14247 550 aaKnown RBP17.36■□□□□ 0.37
SNX13-204ENST00000444712 PGM5Q15124 567 aa17.36■□□□□ 0.37
SNX13-204ENST00000444712 MIIPQ5JXC2 388 aa17.36■□□□□ 0.37
SNX13-204ENST00000444712 CATSPERGQ6ZRH7 1159 aa17.36■□□□□ 0.37
SNX13-204ENST00000444712 ZNF592Q92610 1267 aa17.36■□□□□ 0.37
SNX13-204ENST00000444712 OLFML3Q9NRN5 406 aa17.36■□□□□ 0.37
SNX13-204ENST00000444712 RNF181Q9P0P0 153 aa17.36■□□□□ 0.37
SNX13-204ENST00000444712 SEL1LQ9UBV2 794 aa17.36■□□□□ 0.37
SNX13-204ENST00000444712 TCEAL9Q9UHQ7 104 aa17.36■□□□□ 0.37
SNX13-204ENST00000444712 AFG3L2Q9Y4W6 797 aa17.36■□□□□ 0.37
SNX13-204ENST00000444712 TRAF5O00463 557 aa17.35■□□□□ 0.37
SNX13-204ENST00000444712 MTMR1Q13613 665 aa17.35■□□□□ 0.37
SNX13-204ENST00000444712 RINT1Q6NUQ1 792 aa17.35■□□□□ 0.37
SNX13-204ENST00000444712 MIER3Q7Z3K6 550 aa17.35■□□□□ 0.37
SNX13-204ENST00000444712 SULF1Q8IWU6 871 aa17.35■□□□□ 0.37
SNX13-204ENST00000444712 REXO1L1PQ8IX06 675 aa17.35■□□□□ 0.37
SNX13-204ENST00000444712 REPS2Q8NFH8 660 aa17.35■□□□□ 0.37
SNX13-204ENST00000444712 OR8K1Q8NGG5 319 aa17.35■□□□□ 0.37
SNX13-204ENST00000444712 SCFD1Q8WVM8 642 aa17.35■□□□□ 0.37
SNX13-204ENST00000444712 RMDN3Q96TC7 470 aa17.35■□□□□ 0.37
SNX13-204ENST00000444712 NDST4Q9H3R1 872 aa17.35■□□□□ 0.37
SNX13-204ENST00000444712 AGO4Q9HCK5 861 aaKnown RBP17.35■□□□□ 0.37
SNX13-204ENST00000444712 PXMP2Q9NR77 195 aa17.35■□□□□ 0.37
SNX13-204ENST00000444712 ODF2LQ9ULJ1 636 aa17.35■□□□□ 0.37
SNX13-204ENST00000444712 PHLPP2Q6ZVD8 1323 aa17.35■□□□□ 0.37
SNX13-204ENST00000444712 A0A1W2PQJ5 194 aa17.35■□□□□ 0.37
SNX13-204ENST00000444712 RIOK3O14730 519 aaKnown RBP17.35■□□□□ 0.37
SNX13-204ENST00000444712 PPP1R12BO60237 982 aaPredicted RBP17.35■□□□□ 0.37
SNX13-204ENST00000444712 TRIM21P19474 475 aaKnown RBP17.35■□□□□ 0.37
SNX13-204ENST00000444712 MARSP56192 900 aaKnown RBP17.35■□□□□ 0.37
SNX13-204ENST00000444712 ETF1P62495 437 aaKnown RBP17.35■□□□□ 0.37
SNX13-204ENST00000444712 MAP3K9P80192 1104 aa17.35■□□□□ 0.37
SNX13-204ENST00000444712 BMT2Q1RMZ1 405 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms