RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 CIITAP33076 1130 aa21.19■□□□□ 0.98
CCDC188-202ENST00000444532 SETQ01105 290 aaPredicted RBP21.19■□□□□ 0.98
CCDC188-202ENST00000444532 RBL2Q08999 1139 aa21.19■□□□□ 0.98
CCDC188-202ENST00000444532 TRIM50Q86XT4 487 aa21.19■□□□□ 0.98
CCDC188-202ENST00000444532 AFAP1L1Q8TED9 768 aa21.19■□□□□ 0.98
CCDC188-202ENST00000444532 WASF1Q92558 559 aa21.19■□□□□ 0.98
CCDC188-202ENST00000444532 GTF3C6Q969F1 213 aa21.19■□□□□ 0.98
CCDC188-202ENST00000444532 AIFM3Q96NN9 605 aa21.19■□□□□ 0.98
CCDC188-202ENST00000444532 RNPEPQ9H4A4 650 aa21.19■□□□□ 0.98
CCDC188-202ENST00000444532 SMARCAD1Q9H4L7 1026 aa21.19■□□□□ 0.98
CCDC188-202ENST00000444532 GTF3C3Q9Y5Q9 886 aa21.19■□□□□ 0.98
CCDC188-202ENST00000444532 TANC1Q9C0D5 1861 aa21.18■□□□□ 0.98
CCDC188-202ENST00000444532 M0R2N6 131 aa21.18■□□□□ 0.98
CCDC188-202ENST00000444532 SMAD3P84022 425 aaKnown RBP21.18■□□□□ 0.98
CCDC188-202ENST00000444532 ZNF200P98182 395 aaPredicted RBP21.18■□□□□ 0.98
CCDC188-202ENST00000444532 ITGB3BPQ13352 177 aaPredicted RBP21.18■□□□□ 0.98
CCDC188-202ENST00000444532 RASIP1Q5U651 963 aa21.18■□□□□ 0.98
CCDC188-202ENST00000444532 NECAB1Q8N987 351 aa21.18■□□□□ 0.98
CCDC188-202ENST00000444532 HERVK_113Q902F9 699 aa21.18■□□□□ 0.98
CCDC188-202ENST00000444532 DHX38Q92620 1227 aaKnown RBP21.18■□□□□ 0.98
CCDC188-202ENST00000444532 ATP6V0A1Q93050 837 aa21.18■□□□□ 0.98
CCDC188-202ENST00000444532 MTIF3Q9H2K0 278 aaKnown RBP21.18■□□□□ 0.98
CCDC188-202ENST00000444532 ERAP1Q9NZ08 941 aa21.18■□□□□ 0.98
CCDC188-202ENST00000444532 ORC3Q9UBD5 711 aaPredicted RBP21.18■□□□□ 0.98
CCDC188-202ENST00000444532 IPO5O00410 1097 aaKnown RBP21.17■□□□□ 0.98
CCDC188-202ENST00000444532 LGR5O75473 907 aa21.17■□□□□ 0.98
CCDC188-202ENST00000444532 PARNO95453 639 aaKnown RBP21.17■□□□□ 0.98
CCDC188-202ENST00000444532 LARGE1O95461 756 aa21.17■□□□□ 0.98
CCDC188-202ENST00000444532 ACTR2P61160 394 aa21.17■□□□□ 0.98
CCDC188-202ENST00000444532 HIC1Q14526 733 aa21.17■□□□□ 0.98
CCDC188-202ENST00000444532 NPY5RQ15761 445 aa21.17■□□□□ 0.98
CCDC188-202ENST00000444532 SERINC5Q86VE9 423 aa21.17■□□□□ 0.98
CCDC188-202ENST00000444532 GLG1Q92896 1179 aa21.17■□□□□ 0.98
CCDC188-202ENST00000444532 PHF20Q9BVI0 1012 aa21.17■□□□□ 0.98
CCDC188-202ENST00000444532 TBC1D22BQ9NU19 505 aa21.17■□□□□ 0.98
CCDC188-202ENST00000444532 LIMCH1Q9UPQ0 1083 aa21.17■□□□□ 0.98
CCDC188-202ENST00000444532 EMSYQ7Z589 1322 aa21.17■□□□□ 0.98
CCDC188-202ENST00000444532 SCN5AQ14524 2016 aa21.17■□□□□ 0.98
CCDC188-202ENST00000444532 KAT6AQ92794 2004 aa21.17■□□□□ 0.98
CCDC188-202ENST00000444532 NRCAMQ92823 1304 aa21.16■□□□□ 0.98
CCDC188-202ENST00000444532 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.16■□□□□ 0.98
CCDC188-202ENST00000444532 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.16■□□□□ 0.98
CCDC188-202ENST00000444532 ATG7O95352 703 aa21.16■□□□□ 0.98
CCDC188-202ENST00000444532 CKBP12277 381 aa21.16■□□□□ 0.98
CCDC188-202ENST00000444532 SELPP16109 830 aa21.16■□□□□ 0.98
CCDC188-202ENST00000444532 RBM25P49756 843 aaKnown RBP21.16■□□□□ 0.98
CCDC188-202ENST00000444532 FAM109BQ6ICB4 259 aaPredicted RBP21.16■□□□□ 0.98
CCDC188-202ENST00000444532 TBCKQ8TEA7 893 aa21.16■□□□□ 0.98
CCDC188-202ENST00000444532 VWCEQ96DN2 955 aa21.16■□□□□ 0.98
CCDC188-202ENST00000444532 KIF2CQ99661 725 aa21.16■□□□□ 0.98
CCDC188-202ENST00000444532 ZNF577Q9BSK1 485 aa21.16■□□□□ 0.98
CCDC188-202ENST00000444532 AZI2Q9H6S1 392 aa21.16■□□□□ 0.98
CCDC188-202ENST00000444532 LAMA3Q16787 3333 aa21.16■□□□□ 0.98
CCDC188-202ENST00000444532 DHX15O43143 795 aaKnown RBP21.15■□□□□ 0.98
CCDC188-202ENST00000444532 TRIM71Q2Q1W2 868 aaKnown RBP21.15■□□□□ 0.98
CCDC188-202ENST00000444532 PRR16Q569H4 304 aa21.15■□□□□ 0.98
CCDC188-202ENST00000444532 LRRC8DQ7L1W4 858 aa21.15■□□□□ 0.98
CCDC188-202ENST00000444532 PLPPR4Q7Z2D5 763 aa21.15■□□□□ 0.98
CCDC188-202ENST00000444532 DEFB128Q7Z7B8 93 aa21.15■□□□□ 0.98
CCDC188-202ENST00000444532 SETD4Q9NVD3 440 aa21.15■□□□□ 0.98
CCDC188-202ENST00000444532 KCNJ14Q9UNX9 436 aa21.15■□□□□ 0.98
CCDC188-202ENST00000444532 TREHO43280 583 aa21.14■□□□□ 0.97
CCDC188-202ENST00000444532 EDIL3O43854 480 aa21.14■□□□□ 0.97
CCDC188-202ENST00000444532 ACTN1P12814 892 aa21.14■□□□□ 0.97
CCDC188-202ENST00000444532 FDPSP14324 419 aaKnown RBP21.14■□□□□ 0.97
CCDC188-202ENST00000444532 ADAM17P78536 824 aa21.14■□□□□ 0.97
CCDC188-202ENST00000444532 OTOP2Q7RTS6 562 aa21.14■□□□□ 0.97
CCDC188-202ENST00000444532 KRT25Q7Z3Z0 450 aa21.14■□□□□ 0.97
CCDC188-202ENST00000444532 NSUN7Q8NE18 718 aaKnown RBP21.14■□□□□ 0.97
CCDC188-202ENST00000444532 TNPO1Q92973 898 aaKnown RBP21.14■□□□□ 0.97
CCDC188-202ENST00000444532 PCYT2Q99447 389 aa21.14■□□□□ 0.97
CCDC188-202ENST00000444532 UPF2Q9HAU5 1272 aaKnown RBP21.14■□□□□ 0.97
CCDC188-202ENST00000444532 CCNE2O96020 404 aa21.13■□□□□ 0.97
CCDC188-202ENST00000444532 SLC26A2P50443 739 aa21.13■□□□□ 0.97
CCDC188-202ENST00000444532 STAT5BP51692 787 aa21.13■□□□□ 0.97
CCDC188-202ENST00000444532 NONOQ15233 471 aaKnown RBP eCLIP21.13■□□□□ 0.97
CCDC188-202ENST00000444532 DEFB123Q8N688 67 aa21.13■□□□□ 0.97
CCDC188-202ENST00000444532 IL27Q8NEV9 243 aa21.13■□□□□ 0.97
CCDC188-202ENST00000444532 LMBR1Q8WVP7 490 aa21.13■□□□□ 0.97
CCDC188-202ENST00000444532 WNT8BQ93098 351 aa21.13■□□□□ 0.97
CCDC188-202ENST00000444532 LENG9Q96B70 501 aa21.13■□□□□ 0.97
CCDC188-202ENST00000444532 ZSCAN31Q96LW9 406 aaPredicted RBP21.13■□□□□ 0.97
CCDC188-202ENST00000444532 LAMA2P24043 3122 aaKnown RBP21.13■□□□□ 0.97
CCDC188-202ENST00000444532 CYP3A7-CYP3A51PA0A087WV96 503 aa21.12■□□□□ 0.97
CCDC188-202ENST00000444532 IGKV6D-21A0A0A0MT36 114 aa21.12■□□□□ 0.97
CCDC188-202ENST00000444532 DDX39AO00148 427 aaKnown RBP21.12■□□□□ 0.97
CCDC188-202ENST00000444532 CAND2O75155 1236 aa21.12■□□□□ 0.97
CCDC188-202ENST00000444532 CYP3A7P24462 503 aa21.12■□□□□ 0.97
CCDC188-202ENST00000444532 MARK3P27448 753 aa21.12■□□□□ 0.97
CCDC188-202ENST00000444532 THPOP40225 353 aa21.12■□□□□ 0.97
CCDC188-202ENST00000444532 PPFIA1Q13136 1202 aa21.12■□□□□ 0.97
CCDC188-202ENST00000444532 ZNF618Q5T7W0 954 aa21.12■□□□□ 0.97
CCDC188-202ENST00000444532 ZNF746Q6NUN9 644 aaPredicted RBP21.12■□□□□ 0.97
CCDC188-202ENST00000444532 MOXD1Q6UVY6 613 aa21.12■□□□□ 0.97
CCDC188-202ENST00000444532 ABHD15Q6UXT9 468 aa21.12■□□□□ 0.97
CCDC188-202ENST00000444532 FTOQ9C0B1 505 aaKnown RBP eCLIP21.12■□□□□ 0.97
CCDC188-202ENST00000444532 CXXC1Q9P0U4 656 aaPredicted RBP21.12■□□□□ 0.97
CCDC188-202ENST00000444532 TCEAL9Q9UHQ7 104 aa21.12■□□□□ 0.97
CCDC188-202ENST00000444532 SZT2Q5T011 3432 aa21.12■□□□□ 0.97
CCDC188-202ENST00000444532 CCDC194A0A1B0GVG4 234 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms