RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 PDIA3P30101 505 aaKnown RBP12.45□□□□□ -0.42
SF3A1-203ENST00000444440 TCF7P36402 384 aaPredicted RBP12.45□□□□□ -0.42
SF3A1-203ENST00000444440 EVCP57679 992 aa12.45□□□□□ -0.42
SF3A1-203ENST00000444440 CCT2P78371 535 aaKnown RBP12.45□□□□□ -0.42
SF3A1-203ENST00000444440 ADAM17P78536 824 aa12.45□□□□□ -0.42
SF3A1-203ENST00000444440 DEFB103AP81534 67 aa12.45□□□□□ -0.42
SF3A1-203ENST00000444440 FGD1P98174 961 aa12.45□□□□□ -0.42
SF3A1-203ENST00000444440 ITGB3BPQ13352 177 aaPredicted RBP12.45□□□□□ -0.42
SF3A1-203ENST00000444440 MTMR1Q13613 665 aa12.45□□□□□ -0.42
SF3A1-203ENST00000444440 JAKMIP3Q5VZ66 844 aa12.45□□□□□ -0.42
SF3A1-203ENST00000444440 RUFY3Q7L099 469 aa12.45□□□□□ -0.42
SF3A1-203ENST00000444440 NLRX1Q86UT6 975 aa12.45□□□□□ -0.42
SF3A1-203ENST00000444440 USP38Q8NB14 1042 aa12.45□□□□□ -0.42
SF3A1-203ENST00000444440 UIMC1Q96RL1 719 aa12.45□□□□□ -0.42
SF3A1-203ENST00000444440 PCYT2Q99447 389 aa12.45□□□□□ -0.42
SF3A1-203ENST00000444440 MXRA8Q9BRK3 442 aa12.45□□□□□ -0.42
SF3A1-203ENST00000444440 UPF3BQ9BZI7 483 aaKnown RBP12.45□□□□□ -0.42
SF3A1-203ENST00000444440 FTOQ9C0B1 505 aaKnown RBP eCLIP12.45□□□□□ -0.42
SF3A1-203ENST00000444440 PRDM12Q9H4Q4 367 aa12.45□□□□□ -0.42
SF3A1-203ENST00000444440 SETD4Q9NVD3 440 aa12.45□□□□□ -0.42
SF3A1-203ENST00000444440 TCF20Q9UGU0 1960 aaKnown RBP12.45□□□□□ -0.42
SF3A1-203ENST00000444440 PRRC2BQ5JSZ5 2229 aaKnown RBP12.45□□□□□ -0.42
SF3A1-203ENST00000444440 C17orf102A2RUQ5 167 aa12.44□□□□□ -0.42
SF3A1-203ENST00000444440 hCG_1984214I3L0E3 225 aa12.44□□□□□ -0.42
SF3A1-203ENST00000444440 PRPF3O43395 683 aaKnown RBP12.44□□□□□ -0.42
SF3A1-203ENST00000444440 FOSL2P15408 326 aa12.44□□□□□ -0.42
SF3A1-203ENST00000444440 ATP2A2P16615 1042 aaKnown RBP12.44□□□□□ -0.42
SF3A1-203ENST00000444440 SREBF1P36956 1147 aa12.44□□□□□ -0.42
SF3A1-203ENST00000444440 WDR5P61964 334 aaKnown RBP12.44□□□□□ -0.42
SF3A1-203ENST00000444440 ADGRE1Q14246 886 aa12.44□□□□□ -0.42
SF3A1-203ENST00000444440 RUFY4Q6ZNE9 571 aa12.44□□□□□ -0.42
SF3A1-203ENST00000444440 CCDC155Q8N6L0 562 aa12.44□□□□□ -0.42
SF3A1-203ENST00000444440 ZNF713Q8N859 430 aaPredicted RBP12.44□□□□□ -0.42
SF3A1-203ENST00000444440 MAFAQ8NHW3 353 aaPredicted RBP12.44□□□□□ -0.42
SF3A1-203ENST00000444440 RASGRP4Q8TDF6 673 aa12.44□□□□□ -0.42
SF3A1-203ENST00000444440 LMBR1Q8WVP7 490 aa12.44□□□□□ -0.42
SF3A1-203ENST00000444440 CRYGNQ8WXF5 182 aa12.44□□□□□ -0.42
SF3A1-203ENST00000444440 ATP6V0A1Q93050 837 aa12.44□□□□□ -0.42
SF3A1-203ENST00000444440 ZBTB10Q96DT7 871 aa12.44□□□□□ -0.42
SF3A1-203ENST00000444440 MTIF3Q9H2K0 278 aaKnown RBP12.44□□□□□ -0.42
SF3A1-203ENST00000444440 KCNH7Q9NS40 1196 aa12.44□□□□□ -0.42
SF3A1-203ENST00000444440 COL4A6Q14031 1691 aa12.44□□□□□ -0.42
SF3A1-203ENST00000444440 ARID2Q68CP9 1835 aa12.44□□□□□ -0.42
SF3A1-203ENST00000444440 IGLV3-22A0A075B6J6 115 aa12.43□□□□□ -0.42
SF3A1-203ENST00000444440 FAM86B1E9PN63 330 aa12.43□□□□□ -0.42
SF3A1-203ENST00000444440 EPB41L2O43491 1005 aaKnown RBP12.43□□□□□ -0.42
SF3A1-203ENST00000444440 FAM86B2P0C5J1 330 aa12.43□□□□□ -0.42
SF3A1-203ENST00000444440 MARK3P27448 753 aa12.43□□□□□ -0.42
SF3A1-203ENST00000444440 PSMA5P28066 241 aa12.43□□□□□ -0.42
SF3A1-203ENST00000444440 THPOP40225 353 aa12.43□□□□□ -0.42
SF3A1-203ENST00000444440 MKRN4PQ13434 485 aaPredicted RBP12.43□□□□□ -0.42
SF3A1-203ENST00000444440 RAB30Q15771 203 aa12.43□□□□□ -0.42
SF3A1-203ENST00000444440 SLC26A6Q9BXS9 759 aa12.43□□□□□ -0.42
SF3A1-203ENST00000444440 ZMYND12Q9H0C1 365 aa12.43□□□□□ -0.42
SF3A1-203ENST00000444440 PCDHA11Q9Y5I1 949 aa12.43□□□□□ -0.42
SF3A1-203ENST00000444440 TTC3P53804 2025 aa12.42□□□□□ -0.42
SF3A1-203ENST00000444440 ESYT2A0FGR8 921 aa12.42□□□□□ -0.42
SF3A1-203ENST00000444440 LCHNA4D1U4 455 aa12.42□□□□□ -0.42
SF3A1-203ENST00000444440 EPOPA6NHQ4 379 aa12.42□□□□□ -0.42
SF3A1-203ENST00000444440 MEIS1O00470 390 aa12.42□□□□□ -0.42
SF3A1-203ENST00000444440 CCNE2O96020 404 aa12.42□□□□□ -0.42
SF3A1-203ENST00000444440 CA3P07451 260 aa12.42□□□□□ -0.42
SF3A1-203ENST00000444440 CTSHP09668 335 aa12.42□□□□□ -0.42
SF3A1-203ENST00000444440 ACTN1P12814 892 aa12.42□□□□□ -0.42
SF3A1-203ENST00000444440 IFNAR1P17181 557 aa12.42□□□□□ -0.42
SF3A1-203ENST00000444440 ARHGAP4P98171 946 aa12.42□□□□□ -0.42
SF3A1-203ENST00000444440 AP3B2Q13367 1082 aa12.42□□□□□ -0.42
SF3A1-203ENST00000444440 CEP55Q53EZ4 464 aa12.42□□□□□ -0.42
SF3A1-203ENST00000444440 MARCH8Q5T0T0 291 aa12.42□□□□□ -0.42
SF3A1-203ENST00000444440 CNKSR3Q6P9H4 555 aa12.42□□□□□ -0.42
SF3A1-203ENST00000444440 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.42□□□□□ -0.422e-7■■■■■ 34.3
SF3A1-203ENST00000444440 HERC6Q8IVU3 1022 aa12.42□□□□□ -0.42
SF3A1-203ENST00000444440 SEPT1Q8WYJ6 367 aa12.42□□□□□ -0.42
SF3A1-203ENST00000444440 CDHR1Q96JP9 859 aa12.42□□□□□ -0.42
SF3A1-203ENST00000444440 AIFM3Q96NN9 605 aa12.42□□□□□ -0.42
SF3A1-203ENST00000444440 SLC9A7Q96T83 725 aa12.42□□□□□ -0.42
SF3A1-203ENST00000444440 AGO4Q9HCK5 861 aaKnown RBP12.42□□□□□ -0.42
SF3A1-203ENST00000444440 VPS54Q9P1Q0 977 aa12.42□□□□□ -0.42
SF3A1-203ENST00000444440 SLC9A2Q9UBY0 812 aa12.42□□□□□ -0.42
SF3A1-203ENST00000444440 MSRAQ9UJ68 235 aa12.42□□□□□ -0.42
SF3A1-203ENST00000444440 CYP46A1Q9Y6A2 500 aa12.42□□□□□ -0.42
SF3A1-203ENST00000444440 FNDC1Q4ZHG4 1894 aaPredicted RBP12.42□□□□□ -0.42
SF3A1-203ENST00000444440 NFASCO94856 1347 aa12.41□□□□□ -0.42
SF3A1-203ENST00000444440 EMSYQ7Z589 1322 aa12.41□□□□□ -0.42
SF3A1-203ENST00000444440 CCDC196A0A1B0GTZ2 297 aa12.41□□□□□ -0.42
SF3A1-203ENST00000444440 DDX39AO00148 427 aaKnown RBP12.41□□□□□ -0.42
SF3A1-203ENST00000444440 RFXAPO00287 272 aa12.41□□□□□ -0.42
SF3A1-203ENST00000444440 LGR5O75473 907 aa12.41□□□□□ -0.42
SF3A1-203ENST00000444440 BAIAP3O94812 1187 aa12.41□□□□□ -0.42
SF3A1-203ENST00000444440 FOSP01100 380 aaPredicted RBP12.41□□□□□ -0.42
SF3A1-203ENST00000444440 ACTR2P61160 394 aa12.41□□□□□ -0.42
SF3A1-203ENST00000444440 STK3Q13188 491 aa12.41□□□□□ -0.42
SF3A1-203ENST00000444440 PPP2R2DQ66LE6 453 aa12.41□□□□□ -0.42
SF3A1-203ENST00000444440 GIMAP8Q8ND71 665 aaPredicted RBP12.41□□□□□ -0.42
SF3A1-203ENST00000444440 DBF4BQ8NFT6 615 aa12.41□□□□□ -0.42
SF3A1-203ENST00000444440 RNF26Q9BY78 433 aaPredicted RBP12.41□□□□□ -0.42
SF3A1-203ENST00000444440 TM6SF1Q9BZW5 370 aa12.41□□□□□ -0.42
SF3A1-203ENST00000444440 EHMT1Q9H9B1 1298 aa12.41□□□□□ -0.42
SF3A1-203ENST00000444440 CERS4Q9HA82 394 aa12.41□□□□□ -0.42
SF3A1-203ENST00000444440 SLC28A3Q9HAS3 691 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms