RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 NAP1L4Q99733 375 aaKnown RBP18.14■□□□□ 0.49
USP39-205ENST00000442708 TMEM60Q9H2L4 133 aa18.14■□□□□ 0.49
USP39-205ENST00000442708 TBC1D22BQ9NU19 505 aa18.14■□□□□ 0.49
USP39-205ENST00000442708 A0A0U1RQG5 324 aaPredicted RBP18.13■□□□□ 0.49
USP39-205ENST00000442708 HAS3O00219 553 aa18.13■□□□□ 0.49
USP39-205ENST00000442708 ATG7O95352 703 aa18.13■□□□□ 0.49
USP39-205ENST00000442708 MCM7P33993 719 aa18.13■□□□□ 0.49
USP39-205ENST00000442708 RTP1P59025 263 aa18.13■□□□□ 0.49
USP39-205ENST00000442708 TTC38Q5R3I4 469 aa18.13■□□□□ 0.49
USP39-205ENST00000442708 UTP14CQ5TAP6 766 aaKnown RBP18.13■□□□□ 0.49
USP39-205ENST00000442708 C1orf53Q5VUE5 145 aa18.13■□□□□ 0.49
USP39-205ENST00000442708 LRCH2Q5VUJ6 765 aa18.13■□□□□ 0.49
USP39-205ENST00000442708 B3GNT9Q6UX72 402 aa18.13■□□□□ 0.49
USP39-205ENST00000442708 ABHD15Q6UXT9 468 aa18.13■□□□□ 0.49
USP39-205ENST00000442708 UNC45AQ9H3U1 944 aa18.13■□□□□ 0.49
USP39-205ENST00000442708 PCDHB6Q9Y5E3 794 aa18.13■□□□□ 0.49
USP39-205ENST00000442708 ARVCFO00192 962 aa18.12■□□□□ 0.49
USP39-205ENST00000442708 STX6O43752 255 aa18.12■□□□□ 0.49
USP39-205ENST00000442708 GAS7O60861 476 aa18.12■□□□□ 0.49
USP39-205ENST00000442708 LGR5O75473 907 aa18.12■□□□□ 0.49
USP39-205ENST00000442708 PSEN2P49810 448 aa18.12■□□□□ 0.49
USP39-205ENST00000442708 CHMP4BP1P59074 171 aa18.12■□□□□ 0.49
USP39-205ENST00000442708 RESTQ13127 1097 aa18.12■□□□□ 0.49
USP39-205ENST00000442708 MFSD10Q14728 455 aa18.12■□□□□ 0.49
USP39-205ENST00000442708 C4orf32Q8N8J7 132 aa18.12■□□□□ 0.49
USP39-205ENST00000442708 MTMR9Q96QG7 549 aa18.12■□□□□ 0.49
USP39-205ENST00000442708 HTATIP2Q9BUP3 242 aa18.12■□□□□ 0.49
USP39-205ENST00000442708 VAV3Q9UKW4 847 aa18.12■□□□□ 0.49
USP39-205ENST00000442708 ATP11BQ9Y2G3 1177 aa18.12■□□□□ 0.49
USP39-205ENST00000442708 MYH15Q9Y2K3 1946 aa18.11■□□□□ 0.49
USP39-205ENST00000442708 TRIP12Q14669 1992 aaPredicted RBP18.11■□□□□ 0.49
USP39-205ENST00000442708 IGKV6D-21A0A0A0MT36 114 aa18.11■□□□□ 0.49
USP39-205ENST00000442708 H3BRB1 525 aa18.11■□□□□ 0.49
USP39-205ENST00000442708 TBX3O15119 743 aa18.11■□□□□ 0.49
USP39-205ENST00000442708 NEMFO60524 1076 aa18.11■□□□□ 0.49
USP39-205ENST00000442708 SUPT20HL2P0C7V6 817 aa18.11■□□□□ 0.49
USP39-205ENST00000442708 TRAPPC10P48553 1259 aa18.11■□□□□ 0.49
USP39-205ENST00000442708 KRT76Q01546 638 aa18.11■□□□□ 0.49
USP39-205ENST00000442708 TLE2Q04725 743 aa18.11■□□□□ 0.49
USP39-205ENST00000442708 PKP1Q13835 747 aa18.11■□□□□ 0.49
USP39-205ENST00000442708 HIC1Q14526 733 aa18.11■□□□□ 0.49
USP39-205ENST00000442708 KIAA0753Q2KHM9 967 aa18.11■□□□□ 0.49
USP39-205ENST00000442708 ZNF746Q6NUN9 644 aaPredicted RBP18.11■□□□□ 0.49
USP39-205ENST00000442708 FAM20AQ96MK3 541 aa18.11■□□□□ 0.49
USP39-205ENST00000442708 TEKT3Q9BXF9 490 aa18.11■□□□□ 0.49
USP39-205ENST00000442708 TUT1Q9H6E5 874 aaKnown RBP18.11■□□□□ 0.49
USP39-205ENST00000442708 NOL7Q9UMY1 257 aaKnown RBP18.11■□□□□ 0.49
USP39-205ENST00000442708 MYH9P35579 1960 aaKnown RBP18.1■□□□□ 0.49
USP39-205ENST00000442708 EMSYQ7Z589 1322 aa18.1■□□□□ 0.49
USP39-205ENST00000442708 EML1O00423 815 aa18.1■□□□□ 0.49
USP39-205ENST00000442708 CHMP2AO43633 222 aa18.1■□□□□ 0.49
USP39-205ENST00000442708 PQBP1O60828 265 aaKnown RBP18.1■□□□□ 0.49
USP39-205ENST00000442708 SPIRE1Q08AE8 756 aa18.1■□□□□ 0.49
USP39-205ENST00000442708 CALCRLQ16602 461 aa18.1■□□□□ 0.49
USP39-205ENST00000442708 FAM173BQ6P4H8 233 aa18.1■□□□□ 0.49
USP39-205ENST00000442708 ANKRD33Q7Z3H0 272 aa18.1■□□□□ 0.49
USP39-205ENST00000442708 CCDC60Q8IWA6 550 aaPredicted RBP18.1■□□□□ 0.49
USP39-205ENST00000442708 FAM126BQ8IXS8 530 aa18.1■□□□□ 0.49
USP39-205ENST00000442708 C7orf61Q8IZ16 206 aa18.1■□□□□ 0.49
USP39-205ENST00000442708 DPF3Q92784 378 aa18.1■□□□□ 0.49
USP39-205ENST00000442708 RNPEPQ9H4A4 650 aa18.1■□□□□ 0.49
USP39-205ENST00000442708 ATP4AP20648 1035 aa18.09■□□□□ 0.49
USP39-205ENST00000442708 MARK3P27448 753 aa18.09■□□□□ 0.49
USP39-205ENST00000442708 BECN1Q14457 450 aa18.09■□□□□ 0.49
USP39-205ENST00000442708 SWSAP1Q6NVH7 229 aa18.09■□□□□ 0.49
USP39-205ENST00000442708 NFRKBQ6P4R8 1299 aa18.09■□□□□ 0.49
USP39-205ENST00000442708 CTAGE1Q96RT6 745 aa18.09■□□□□ 0.49
USP39-205ENST00000442708 TRPV6Q9H1D0 765 aa18.09■□□□□ 0.49
USP39-205ENST00000442708 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.09■□□□□ 0.49
USP39-205ENST00000442708 DISC1Q9NRI5 854 aa18.09■□□□□ 0.49
USP39-205ENST00000442708 HDAC6Q9UBN7 1215 aa18.09■□□□□ 0.49
USP39-205ENST00000442708 WDR64B1ANS9 1081 aa18.08■□□□□ 0.48
USP39-205ENST00000442708 EVI5O60447 810 aa18.08■□□□□ 0.48
USP39-205ENST00000442708 B4GALT4O60513 344 aa18.08■□□□□ 0.48
USP39-205ENST00000442708 CD4P01730 458 aa18.08■□□□□ 0.48
USP39-205ENST00000442708 TXKP42681 527 aa18.08■□□□□ 0.48
USP39-205ENST00000442708 ZNF200P98182 395 aaPredicted RBP18.08■□□□□ 0.48
USP39-205ENST00000442708 FAAP100Q0VG06 881 aa18.08■□□□□ 0.48
USP39-205ENST00000442708 PPP2R5CQ13362 524 aa18.08■□□□□ 0.48
USP39-205ENST00000442708 UGCGQ16739 394 aa18.08■□□□□ 0.48
USP39-205ENST00000442708 RILPL1Q5EBL4 403 aa18.08■□□□□ 0.48
USP39-205ENST00000442708 FOXD4L5Q5VV16 416 aaPredicted RBP18.08■□□□□ 0.48
USP39-205ENST00000442708 GDF6Q6KF10 455 aaPredicted RBP18.08■□□□□ 0.48
USP39-205ENST00000442708 BRAPQ7Z569 592 aa18.08■□□□□ 0.48
USP39-205ENST00000442708 SH3RF1Q7Z6J0 888 aa18.08■□□□□ 0.48
USP39-205ENST00000442708 SMAP1Q8IYB5 467 aaPredicted RBP18.08■□□□□ 0.48
USP39-205ENST00000442708 SLFN12Q8IYM2 578 aa18.08■□□□□ 0.48
USP39-205ENST00000442708 FOXD4L4Q8WXT5 416 aaPredicted RBP18.08■□□□□ 0.48
USP39-205ENST00000442708 GLG1Q92896 1179 aa18.08■□□□□ 0.48
USP39-205ENST00000442708 KATNAL1Q9BW62 490 aa18.08■□□□□ 0.48
USP39-205ENST00000442708 SMARCAD1Q9H4L7 1026 aa18.08■□□□□ 0.48
USP39-205ENST00000442708 TRMT13Q9NUP7 481 aaKnown RBP18.08■□□□□ 0.48
USP39-205ENST00000442708 PCDHA10Q9Y5I2 948 aa18.08■□□□□ 0.48
USP39-205ENST00000442708 MARCH6O60337 910 aa18.07■□□□□ 0.48
USP39-205ENST00000442708 BAG4O95429 457 aaKnown RBP18.07■□□□□ 0.48
USP39-205ENST00000442708 PSAPP07602 524 aa18.07■□□□□ 0.48
USP39-205ENST00000442708 OR52Z1P0C646 297 aa18.07■□□□□ 0.48
USP39-205ENST00000442708 SMIM10L2AP0DMW4 78 aa18.07■□□□□ 0.48
USP39-205ENST00000442708 SMIM10L2BP0DMW5 78 aa18.07■□□□□ 0.48
USP39-205ENST00000442708 STAT5BP51692 787 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms