RNA–Protein interactions for RNA: ENST00000442625.2

MCF2L-218, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-218ENST00000442625 CCDC13Q8IYE1 715 aa15.5■□□□□ 0.07
MCF2L-218ENST00000442625 SNX29Q8TEQ0 813 aa15.5■□□□□ 0.07
MCF2L-218ENST00000442625 CXorf56Q9H5V9 222 aa15.5■□□□□ 0.07
MCF2L-218ENST00000442625 RREB1Q92766 1687 aa15.5■□□□□ 0.07
MCF2L-218ENST00000442625 MYH1P12882 1939 aa15.49■□□□□ 0.07
MCF2L-218ENST00000442625 CALRP27797 417 aaKnown RBP15.49■□□□□ 0.07
MCF2L-218ENST00000442625 BTDP43251 543 aa15.49■□□□□ 0.07
MCF2L-218ENST00000442625 CCDC40Q4G0X9 1142 aa15.49■□□□□ 0.07
MCF2L-218ENST00000442625 CCDC84Q86UT8 332 aaPredicted RBP15.49■□□□□ 0.07
MCF2L-218ENST00000442625 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.49■□□□□ 0.07
MCF2L-218ENST00000442625 NPHP3-ACAD11A0A0J9YXS1 232 aa15.49■□□□□ 0.07
MCF2L-218ENST00000442625 GRID2IPA4D2P6 1211 aa15.49■□□□□ 0.07
MCF2L-218ENST00000442625 EDIL3O43854 480 aa15.49■□□□□ 0.07
MCF2L-218ENST00000442625 ACTN1P12814 892 aa15.49■□□□□ 0.07
MCF2L-218ENST00000442625 TM4SF1P30408 202 aa15.49■□□□□ 0.07
MCF2L-218ENST00000442625 HSD17B3P37058 310 aa15.49■□□□□ 0.07
MCF2L-218ENST00000442625 UAP1Q16222 522 aaPredicted RBP15.49■□□□□ 0.07
MCF2L-218ENST00000442625 SFMBT2Q5VUG0 894 aa15.49■□□□□ 0.07
MCF2L-218ENST00000442625 AMIGO3Q86WK7 504 aa15.49■□□□□ 0.07
MCF2L-218ENST00000442625 INPP4AQ96PE3 977 aaPredicted RBP15.49■□□□□ 0.07
MCF2L-218ENST00000442625 MTMR9Q96QG7 549 aa15.49■□□□□ 0.07
MCF2L-218ENST00000442625 COL14A1Q05707 1796 aaKnown RBP15.49■□□□□ 0.07
MCF2L-218ENST00000442625 IRS2Q9Y4H2 1338 aa15.48■□□□□ 0.07
MCF2L-218ENST00000442625 FSBPO95073 299 aa15.48■□□□□ 0.07
MCF2L-218ENST00000442625 TNFRSF8P28908 595 aa15.48■□□□□ 0.07
MCF2L-218ENST00000442625 TNNI2P48788 182 aa15.48■□□□□ 0.07
MCF2L-218ENST00000442625 SLC9C1Q4G0N8 1177 aa15.48■□□□□ 0.07
MCF2L-218ENST00000442625 LZTS2Q9BRK4 669 aa15.48■□□□□ 0.07
MCF2L-218ENST00000442625 ROBO3Q96MS0 1386 aa15.48■□□□□ 0.07
MCF2L-218ENST00000442625 PDHBP11177 359 aa15.48■□□□□ 0.07
MCF2L-218ENST00000442625 CDC37Q16543 378 aaPredicted RBP15.48■□□□□ 0.07
MCF2L-218ENST00000442625 UBE2SQ16763 222 aa15.48■□□□□ 0.07
MCF2L-218ENST00000442625 MEI1Q5TIA1 1274 aa15.48■□□□□ 0.07
MCF2L-218ENST00000442625 LRRC47Q8N1G4 583 aaKnown RBP15.48■□□□□ 0.07
MCF2L-218ENST00000442625 WDR66Q8TBY9 1149 aa15.48■□□□□ 0.07
MCF2L-218ENST00000442625 RAD54LQ92698 747 aa15.48■□□□□ 0.07
MCF2L-218ENST00000442625 CYFIP2Q96F07 1278 aa15.48■□□□□ 0.07
MCF2L-218ENST00000442625 DDX47Q9H0S4 455 aaKnown RBP15.48■□□□□ 0.07
MCF2L-218ENST00000442625 CNOT8Q9UFF9 292 aaKnown RBP15.48■□□□□ 0.07
MCF2L-218ENST00000442625 SNED1Q8TER0 1413 aa15.48■□□□□ 0.07
MCF2L-218ENST00000442625 CEP104O60308 925 aa15.47■□□□□ 0.07
MCF2L-218ENST00000442625 ECHS1P30084 290 aa15.47■□□□□ 0.07
MCF2L-218ENST00000442625 PPP1R2P41236 205 aa15.47■□□□□ 0.07
MCF2L-218ENST00000442625 NAB2Q15742 525 aa15.47■□□□□ 0.07
MCF2L-218ENST00000442625 ZC3H12AQ5D1E8 599 aaKnown RBP15.47■□□□□ 0.07
MCF2L-218ENST00000442625 LRCH2Q5VUJ6 765 aa15.47■□□□□ 0.07
MCF2L-218ENST00000442625 GUF1Q8N442 669 aaKnown RBP15.47■□□□□ 0.07
MCF2L-218ENST00000442625 ZKSCAN4Q969J2 545 aaPredicted RBP15.47■□□□□ 0.07
MCF2L-218ENST00000442625 RTFDC1Q9BY42 306 aaPredicted RBP15.47■□□□□ 0.07
MCF2L-218ENST00000442625 ITGA4P13612 1032 aa15.47■□□□□ 0.07
MCF2L-218ENST00000442625 GSCP56915 257 aaPredicted RBP15.47■□□□□ 0.07
MCF2L-218ENST00000442625 BIRC2Q13490 618 aa15.47■□□□□ 0.07
MCF2L-218ENST00000442625 GLE1Q53GS7 698 aaKnown RBP15.47■□□□□ 0.07
MCF2L-218ENST00000442625 ODF2Q5BJF6 829 aa15.47■□□□□ 0.07
MCF2L-218ENST00000442625 TEX11Q8IYF3 940 aa15.47■□□□□ 0.07
MCF2L-218ENST00000442625 USP38Q8NB14 1042 aa15.47■□□□□ 0.07
MCF2L-218ENST00000442625 UBLCP1Q8WVY7 318 aaPredicted RBP15.47■□□□□ 0.07
MCF2L-218ENST00000442625 TSPAN18Q96SJ8 248 aa15.47■□□□□ 0.07
MCF2L-218ENST00000442625 NYXQ9GZU5 481 aa15.47■□□□□ 0.07
MCF2L-218ENST00000442625 GPCPD1Q9NPB8 672 aa15.47■□□□□ 0.07
MCF2L-218ENST00000442625 DNM1LO00429 736 aa15.46■□□□□ 0.07
MCF2L-218ENST00000442625 GNPATO15228 680 aa15.46■□□□□ 0.07
MCF2L-218ENST00000442625 ECM2O94769 699 aaPredicted RBP15.46■□□□□ 0.07
MCF2L-218ENST00000442625 TMEM266Q2M3C6 531 aa15.46■□□□□ 0.07
MCF2L-218ENST00000442625 TPTE2Q6XPS3 522 aa15.46■□□□□ 0.07
MCF2L-218ENST00000442625 TRIM31Q9BZY9 425 aa15.46■□□□□ 0.07
MCF2L-218ENST00000442625 TMBIM4Q9HC24 238 aa15.46■□□□□ 0.07
MCF2L-218ENST00000442625 KLC4Q9NSK0 619 aa15.46■□□□□ 0.07
MCF2L-218ENST00000442625 PVALEFA0A1B0GWK0 134 aa15.46■□□□□ 0.07
MCF2L-218ENST00000442625 CCDC189A1A4V9 331 aa15.46■□□□□ 0.07
MCF2L-218ENST00000442625 KLHL30Q0D2K2 578 aa15.46■□□□□ 0.07
MCF2L-218ENST00000442625 COBLL1Q53SF7 1204 aa15.46■□□□□ 0.07
MCF2L-218ENST00000442625 KRT79Q5XKE5 535 aa15.46■□□□□ 0.07
MCF2L-218ENST00000442625 NEDD1Q8NHV4 660 aa15.46■□□□□ 0.07
MCF2L-218ENST00000442625 RUBCNQ92622 972 aa15.46■□□□□ 0.07
MCF2L-218ENST00000442625 PAIP2Q9BPZ3 127 aaKnown RBP15.46■□□□□ 0.07
MCF2L-218ENST00000442625 CDCA7Q9BWT1 371 aaPredicted RBP15.46■□□□□ 0.07
MCF2L-218ENST00000442625 CELF4Q9BZC1 486 aaKnown RBP15.46■□□□□ 0.07
MCF2L-218ENST00000442625 SLC40A1Q9NP59 571 aa15.46■□□□□ 0.07
MCF2L-218ENST00000442625 STK17AQ9UEE5 414 aa15.46■□□□□ 0.07
MCF2L-218ENST00000442625 DDX20Q9UHI6 824 aaKnown RBP15.46■□□□□ 0.07
MCF2L-218ENST00000442625 OPLAHO14841 1288 aa15.45■□□□□ 0.06
MCF2L-218ENST00000442625 FAM107AO95990 144 aa15.45■□□□□ 0.06
MCF2L-218ENST00000442625 SERPING1P05155 500 aa15.45■□□□□ 0.06
MCF2L-218ENST00000442625 CTNNA1P35221 906 aaKnown RBP15.45■□□□□ 0.06
MCF2L-218ENST00000442625 LRRC63Q05C16 580 aa15.45■□□□□ 0.06
MCF2L-218ENST00000442625 COASYQ13057 564 aa15.45■□□□□ 0.06
MCF2L-218ENST00000442625 C16orf86Q6ZW13 317 aa15.45■□□□□ 0.06
MCF2L-218ENST00000442625 RNF10Q8N5U6 811 aaKnown RBP15.45■□□□□ 0.06
MCF2L-218ENST00000442625 MDM1Q8TC05 714 aa15.45■□□□□ 0.06
MCF2L-218ENST00000442625 OSBPL7Q9BZF2 842 aa15.45■□□□□ 0.06
MCF2L-218ENST00000442625 ZHX3Q9H4I2 956 aa15.45■□□□□ 0.06
MCF2L-218ENST00000442625 VCPKMTQ9H867 229 aa15.45■□□□□ 0.06
MCF2L-218ENST00000442625 HAUS2Q9NVX0 235 aa15.45■□□□□ 0.06
MCF2L-218ENST00000442625 ATP6V0A2Q9Y487 856 aa15.45■□□□□ 0.06
MCF2L-218ENST00000442625 ROBO1Q9Y6N7 1651 aa15.45■□□□□ 0.06
MCF2L-218ENST00000442625 SSU72P8A0A1W2PR75 194 aa15.45■□□□□ 0.06
MCF2L-218ENST00000442625 PHF20L1A8MW92 1017 aa15.45■□□□□ 0.06
MCF2L-218ENST00000442625 FXR2P51116 673 aaKnown RBP eCLIP15.45■□□□□ 0.06
MCF2L-218ENST00000442625 ADCY7P51828 1080 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms