RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 KIAA0319Q5VV43 1072 aa11.63□□□□□ -0.55
SYNE2-206ENST00000441438 DNAJB7Q7Z6W7 309 aaPredicted RBP11.63□□□□□ -0.55
SYNE2-206ENST00000441438 OR52K2Q8NGK3 314 aa11.63□□□□□ -0.55
SYNE2-206ENST00000441438 MTMR8Q96EF0 704 aa11.63□□□□□ -0.55
SYNE2-206ENST00000441438 BRD8Q9H0E9 1235 aa11.63□□□□□ -0.55
SYNE2-206ENST00000441438 TTC12Q9H892 705 aaPredicted RBP11.63□□□□□ -0.55
SYNE2-206ENST00000441438 GAKO14976 1311 aa11.62□□□□□ -0.55
SYNE2-206ENST00000441438 A0A087X0B3 334 aa11.62□□□□□ -0.55
SYNE2-206ENST00000441438 ANO9A1A5B4 782 aa11.62□□□□□ -0.55
SYNE2-206ENST00000441438 CHMLP26374 656 aa11.62□□□□□ -0.55
SYNE2-206ENST00000441438 TM4SF4P48230 202 aa11.62□□□□□ -0.55
SYNE2-206ENST00000441438 GUCY1B3Q02153 619 aa11.62□□□□□ -0.55
SYNE2-206ENST00000441438 HOOK3Q86VS8 718 aa11.62□□□□□ -0.55
SYNE2-206ENST00000441438 PPFIBP1Q86W92 1011 aa11.62□□□□□ -0.55
SYNE2-206ENST00000441438 C7orf57Q8NEG2 295 aa11.62□□□□□ -0.55
SYNE2-206ENST00000441438 B3GNT4Q9C0J1 378 aa11.62□□□□□ -0.55
SYNE2-206ENST00000441438 COG5Q9UP83 839 aa11.62□□□□□ -0.55
SYNE2-206ENST00000441438 SCG2P13521 617 aa11.62□□□□□ -0.55
SYNE2-206ENST00000441438 ADH7P40394 386 aa11.62□□□□□ -0.55
SYNE2-206ENST00000441438 IFIT5Q13325 482 aaKnown RBP11.62□□□□□ -0.55
SYNE2-206ENST00000441438 HS2ST1Q7LGA3 356 aa11.62□□□□□ -0.55
SYNE2-206ENST00000441438 TTC39CQ8N584 583 aa11.62□□□□□ -0.55
SYNE2-206ENST00000441438 ALKBH8Q96BT7 664 aaKnown RBP11.62□□□□□ -0.55
SYNE2-206ENST00000441438 TNIP3Q96KP6 325 aa11.62□□□□□ -0.55
SYNE2-206ENST00000441438 CARD14Q9BXL6 1004 aa11.62□□□□□ -0.55
SYNE2-206ENST00000441438 HELLSQ9NRZ9 838 aa11.62□□□□□ -0.55
SYNE2-206ENST00000441438 ZNF831Q5JPB2 1677 aa11.61□□□□□ -0.55
SYNE2-206ENST00000441438 H0Y626 953 aa11.61□□□□□ -0.55
SYNE2-206ENST00000441438 ENDOUP21128 410 aaKnown RBP11.61□□□□□ -0.55
SYNE2-206ENST00000441438 CCT8P50990 548 aa11.61□□□□□ -0.55
SYNE2-206ENST00000441438 TGFB2P61812 414 aa11.61□□□□□ -0.55
SYNE2-206ENST00000441438 ATG9AQ7Z3C6 839 aa11.61□□□□□ -0.55
SYNE2-206ENST00000441438 CBARPQ8N350 705 aaPredicted RBP11.61□□□□□ -0.55
SYNE2-206ENST00000441438 PPM1NQ8N819 430 aa11.61□□□□□ -0.55
SYNE2-206ENST00000441438 ZNF579Q8NAF0 562 aaKnown RBP11.61□□□□□ -0.55
SYNE2-206ENST00000441438 SLC35B4Q969S0 331 aa11.61□□□□□ -0.55
SYNE2-206ENST00000441438 ZPBPQ9BS86 351 aa11.61□□□□□ -0.55
SYNE2-206ENST00000441438 CGNL1Q0VF96 1302 aa11.61□□□□□ -0.55
SYNE2-206ENST00000441438 AP3B1O00203 1094 aa11.61□□□□□ -0.55
SYNE2-206ENST00000441438 IRS4O14654 1257 aaPredicted RBP11.61□□□□□ -0.55
SYNE2-206ENST00000441438 GRM3Q14832 879 aa11.61□□□□□ -0.55
SYNE2-206ENST00000441438 OCLNQ16625 522 aa11.61□□□□□ -0.55
SYNE2-206ENST00000441438 FAM9CQ8IZT9 166 aa11.61□□□□□ -0.55
SYNE2-206ENST00000441438 OR6C4Q8NGE1 309 aa11.61□□□□□ -0.55
SYNE2-206ENST00000441438 SSH3Q8TE77 659 aa11.61□□□□□ -0.55
SYNE2-206ENST00000441438 ABCB6Q9NP58 842 aa11.61□□□□□ -0.55
SYNE2-206ENST00000441438 TOPORSQ9NS56 1045 aaPredicted RBP11.61□□□□□ -0.55
SYNE2-206ENST00000441438 HOMER3Q9NSC5 361 aa11.61□□□□□ -0.55
SYNE2-206ENST00000441438 HDAC6Q9UBN7 1215 aa11.61□□□□□ -0.55
SYNE2-206ENST00000441438 DAGLAQ9Y4D2 1042 aa11.61□□□□□ -0.55
SYNE2-206ENST00000441438 CACNB4O00305 520 aaPredicted RBP11.61□□□□□ -0.55
SYNE2-206ENST00000441438 SLC7A4O43246 635 aa11.61□□□□□ -0.55
SYNE2-206ENST00000441438 SKIP12755 728 aa11.61□□□□□ -0.55
SYNE2-206ENST00000441438 TM4SF20Q53R12 229 aa11.61□□□□□ -0.55
SYNE2-206ENST00000441438 LPCAT2Q7L5N7 544 aa11.61□□□□□ -0.55
SYNE2-206ENST00000441438 ZNF804AQ7Z570 1209 aa11.61□□□□□ -0.55
SYNE2-206ENST00000441438 CELF2-AS1Q8N7Q2 184 aa11.61□□□□□ -0.55
SYNE2-206ENST00000441438 CHCHD6Q9BRQ6 235 aa11.61□□□□□ -0.55
SYNE2-206ENST00000441438 NSRP1Q9H0G5 558 aaKnown RBP11.61□□□□□ -0.55
SYNE2-206ENST00000441438 SOS1Q07889 1333 aaPredicted RBP11.6□□□□□ -0.55
SYNE2-206ENST00000441438 SOS2Q07890 1332 aaPredicted RBP11.6□□□□□ -0.55
SYNE2-206ENST00000441438 NEBLO76041 1014 aa11.6□□□□□ -0.55
SYNE2-206ENST00000441438 TMEM11P17152 192 aa11.6□□□□□ -0.55
SYNE2-206ENST00000441438 MX2P20592 715 aa11.6□□□□□ -0.55
SYNE2-206ENST00000441438 SLFN5Q08AF3 891 aa11.6□□□□□ -0.55
SYNE2-206ENST00000441438 DSC3Q14574 896 aa11.6□□□□□ -0.55
SYNE2-206ENST00000441438 ITPRIPL1Q6GPH6 555 aa11.6□□□□□ -0.55
SYNE2-206ENST00000441438 RETSATQ6NUM9 610 aa11.6□□□□□ -0.55
SYNE2-206ENST00000441438 PPP1R42Q7Z4L9 355 aa11.6□□□□□ -0.55
SYNE2-206ENST00000441438 MDM1Q8TC05 714 aa11.6□□□□□ -0.55
SYNE2-206ENST00000441438 NRBF2Q96F24 287 aa11.6□□□□□ -0.55
SYNE2-206ENST00000441438 H7C1W4 665 aa11.6□□□□□ -0.55
SYNE2-206ENST00000441438 NDC80O14777 642 aa11.6□□□□□ -0.55
SYNE2-206ENST00000441438 ZBED4O75132 1171 aa11.6□□□□□ -0.55
SYNE2-206ENST00000441438 CAPNS1P04632 268 aa11.6□□□□□ -0.55
SYNE2-206ENST00000441438 AKR1B1P15121 316 aa11.6□□□□□ -0.55
SYNE2-206ENST00000441438 BRINP3Q76B58 766 aa11.6□□□□□ -0.55
SYNE2-206ENST00000441438 RNF180Q86T96 592 aa11.6□□□□□ -0.55
SYNE2-206ENST00000441438 CCHCR1Q8TD31 782 aa11.6□□□□□ -0.55
SYNE2-206ENST00000441438 COG3Q96JB2 828 aa11.6□□□□□ -0.55
SYNE2-206ENST00000441438 EDEM3Q9BZQ6 932 aa11.6□□□□□ -0.55
SYNE2-206ENST00000441438 TRPV4Q9HBA0 871 aa11.6□□□□□ -0.55
SYNE2-206ENST00000441438 MCM9Q9NXL9 1143 aa11.6□□□□□ -0.55
SYNE2-206ENST00000441438 AGO2Q9UKV8 859 aaKnown RBP11.6□□□□□ -0.55
SYNE2-206ENST00000441438 HPCAL4Q9UM19 191 aa11.6□□□□□ -0.55
SYNE2-206ENST00000441438 NSD2O96028 1365 aa11.6□□□□□ -0.55
SYNE2-206ENST00000441438 PARP4Q9UKK3 1724 aaKnown RBP11.59□□□□□ -0.55
SYNE2-206ENST00000441438 M0R3H8 397 aa11.59□□□□□ -0.55
SYNE2-206ENST00000441438 PRKAR2BP31323 418 aa11.59□□□□□ -0.55
SYNE2-206ENST00000441438 ARPC4P59998 168 aa11.59□□□□□ -0.55
SYNE2-206ENST00000441438 KLHL30Q0D2K2 578 aa11.59□□□□□ -0.55
SYNE2-206ENST00000441438 MMEL1Q495T6 779 aa11.59□□□□□ -0.55
SYNE2-206ENST00000441438 LHFPL2Q6ZUX7 228 aa11.59□□□□□ -0.55
SYNE2-206ENST00000441438 RSPH3Q86UC2 560 aa11.59□□□□□ -0.55
SYNE2-206ENST00000441438 SPIRE2Q8WWL2 714 aa11.59□□□□□ -0.55
SYNE2-206ENST00000441438 LMAN2LQ9H0V9 348 aa11.59□□□□□ -0.55
SYNE2-206ENST00000441438 IL20Q9NYY1 176 aa11.59□□□□□ -0.55
SYNE2-206ENST00000441438 NOD1Q9Y239 953 aa11.59□□□□□ -0.55
SYNE2-206ENST00000441438 THSD7AQ9UPZ6 1657 aa11.59□□□□□ -0.55
SYNE2-206ENST00000441438 GNAT3A8MTJ3 354 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms