RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 RWDD1Q9H446 243 aaPredicted RBP5.82□□□□□ -1.48
PTPN4-206ENST00000441089 BICC1Q9H694 974 aaKnown RBP5.82□□□□□ -1.48
PTPN4-206ENST00000441089 CWC22Q9HCG8 908 aaKnown RBP5.82□□□□□ -1.48
PTPN4-206ENST00000441089 CD320Q9NPF0 282 aa5.82□□□□□ -1.48
PTPN4-206ENST00000441089 TMEM39AQ9NV64 488 aa5.82□□□□□ -1.48
PTPN4-206ENST00000441089 DAGLAQ9Y4D2 1042 aa5.82□□□□□ -1.48
PTPN4-206ENST00000441089 MYO15AQ9UKN7 3530 aa5.82□□□□□ -1.48
PTPN4-206ENST00000441089 NAV2Q8IVL1 2488 aa5.82□□□□□ -1.48
PTPN4-206ENST00000441089 ZFYVE26Q68DK2 2539 aa5.81□□□□□ -1.48
PTPN4-206ENST00000441089 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.81□□□□□ -1.48
PTPN4-206ENST00000441089 SNAP23O00161 211 aa5.81□□□□□ -1.48
PTPN4-206ENST00000441089 TAF5LO75529 589 aa5.81□□□□□ -1.48
PTPN4-206ENST00000441089 KRT37O76014 449 aa5.81□□□□□ -1.48
PTPN4-206ENST00000441089 SLC5A1P13866 664 aa5.81□□□□□ -1.48
PTPN4-206ENST00000441089 HIBADHP31937 336 aaKnown RBP5.81□□□□□ -1.48
PTPN4-206ENST00000441089 ADCYAP1R1P41586 468 aa5.81□□□□□ -1.48
PTPN4-206ENST00000441089 RFX5P48382 616 aaPredicted RBP5.81□□□□□ -1.48
PTPN4-206ENST00000441089 IRX3P78415 501 aaPredicted RBP5.81□□□□□ -1.48
PTPN4-206ENST00000441089 ATP2B2Q01814 1243 aa5.81□□□□□ -1.48
PTPN4-206ENST00000441089 PKN1Q16512 942 aa5.81□□□□□ -1.48
PTPN4-206ENST00000441089 RABL6Q3YEC7 729 aaPredicted RBP5.81□□□□□ -1.48
PTPN4-206ENST00000441089 MFSD5Q6N075 450 aa5.81□□□□□ -1.48
PTPN4-206ENST00000441089 APOBEC3HQ6NTF7 200 aaKnown RBP5.81□□□□□ -1.48
PTPN4-206ENST00000441089 HHIPL2Q6UWX4 724 aa5.81□□□□□ -1.48
PTPN4-206ENST00000441089 PLEKHH3Q7Z736 793 aa5.81□□□□□ -1.48
PTPN4-206ENST00000441089 FAM178BQ8IXR5 827 aa5.81□□□□□ -1.48
PTPN4-206ENST00000441089 CMTR1Q8N1G2 835 aaKnown RBP5.81□□□□□ -1.48
PTPN4-206ENST00000441089 SSH3Q8TE77 659 aa5.81□□□□□ -1.48
PTPN4-206ENST00000441089 STK32AQ8WU08 396 aa5.81□□□□□ -1.48
PTPN4-206ENST00000441089 GTF3C2Q8WUA4 911 aaPredicted RBP5.81□□□□□ -1.48
PTPN4-206ENST00000441089 CCDC97Q96F63 343 aaPredicted RBP5.81□□□□□ -1.48
PTPN4-206ENST00000441089 EDC3Q96F86 508 aaKnown RBP5.81□□□□□ -1.48
PTPN4-206ENST00000441089 MYRFLQ96LU7 910 aa5.81□□□□□ -1.48
PTPN4-206ENST00000441089 TOX2Q96NM4 488 aa5.81□□□□□ -1.48
PTPN4-206ENST00000441089 PLA2G12BQ9BX93 195 aa5.81□□□□□ -1.48
PTPN4-206ENST00000441089 LACRTQ9GZZ8 138 aa5.81□□□□□ -1.48
PTPN4-206ENST00000441089 NKX2-4Q9H2Z4 354 aa5.81□□□□□ -1.48
PTPN4-206ENST00000441089 DCTPP1Q9H773 170 aa5.81□□□□□ -1.48
PTPN4-206ENST00000441089 SRA1Q9HD15 236 aaKnown RBP5.81□□□□□ -1.48
PTPN4-206ENST00000441089 SUGT1Q9Y2Z0 365 aa5.81□□□□□ -1.48
PTPN4-206ENST00000441089 PPME1Q9Y570 386 aa5.81□□□□□ -1.48
PTPN4-206ENST00000441089 MTCH2Q9Y6C9 303 aa5.81□□□□□ -1.48
PTPN4-206ENST00000441089 ZNFX1Q9P2E3 1918 aaKnown RBP5.8□□□□□ -1.48
PTPN4-206ENST00000441089 ANKRD18BA2A2Z9 1011 aa5.8□□□□□ -1.48
PTPN4-206ENST00000441089 DCDC2CA8MYV0 355 aa5.8□□□□□ -1.48
PTPN4-206ENST00000441089 SRGAP3O43295 1099 aa5.8□□□□□ -1.48
PTPN4-206ENST00000441089 TIMP1P01033 207 aa5.8□□□□□ -1.48
PTPN4-206ENST00000441089 GHRHP01286 108 aa5.8□□□□□ -1.48
PTPN4-206ENST00000441089 C8AP07357 584 aa5.8□□□□□ -1.48
PTPN4-206ENST00000441089 PREPP48147 710 aa5.8□□□□□ -1.48
PTPN4-206ENST00000441089 TCP10Q12799 353 aa5.8□□□□□ -1.48
PTPN4-206ENST00000441089 TMEM240Q5SV17 173 aa5.8□□□□□ -1.48
PTPN4-206ENST00000441089 LMBR1LQ6UX01 489 aa5.8□□□□□ -1.48
PTPN4-206ENST00000441089 GPR142Q7Z601 462 aa5.8□□□□□ -1.48
PTPN4-206ENST00000441089 FAM20CQ8IXL6 584 aa5.8□□□□□ -1.48
PTPN4-206ENST00000441089 KLHDC4Q8TBB5 520 aa5.8□□□□□ -1.48
PTPN4-206ENST00000441089 FERMT2Q96AC1 680 aa5.8□□□□□ -1.48
PTPN4-206ENST00000441089 PBXIP1Q96AQ6 731 aa5.8□□□□□ -1.48
PTPN4-206ENST00000441089 PRIMPOLQ96LW4 560 aa5.8□□□□□ -1.48
PTPN4-206ENST00000441089 PA2G4Q9UQ80 394 aaKnown RBP5.8□□□□□ -1.48
PTPN4-206ENST00000441089 EXOC6BQ9Y2D4 811 aa5.8□□□□□ -1.48
PTPN4-206ENST00000441089 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.8□□□□□ -1.48
PTPN4-206ENST00000441089 SEPT4O43236 478 aa5.79□□□□□ -1.48
PTPN4-206ENST00000441089 PRMT3O60678 531 aa5.79□□□□□ -1.48
PTPN4-206ENST00000441089 PQBP1O60828 265 aaKnown RBP5.79□□□□□ -1.48
PTPN4-206ENST00000441089 FRAT2O75474 233 aaPredicted RBP5.79□□□□□ -1.48
PTPN4-206ENST00000441089 CSF1RP07333 972 aa5.79□□□□□ -1.48
PTPN4-206ENST00000441089 PSAPP07602 524 aa5.79□□□□□ -1.48
PTPN4-206ENST00000441089 HOXC6P09630 235 aa5.79□□□□□ -1.48
PTPN4-206ENST00000441089 CD68P34810 354 aaPredicted RBP5.79□□□□□ -1.48
PTPN4-206ENST00000441089 ID4P47928 161 aa5.79□□□□□ -1.48
PTPN4-206ENST00000441089 HERVK_113P62684 666 aa5.79□□□□□ -1.48
PTPN4-206ENST00000441089 ERVK-24P63145 666 aa5.79□□□□□ -1.48
PTPN4-206ENST00000441089 CCNA1P78396 465 aa5.79□□□□□ -1.48
PTPN4-206ENST00000441089 UBE4AQ14139 1066 aa5.79□□□□□ -1.48
PTPN4-206ENST00000441089 COX20Q5RI15 118 aa5.79□□□□□ -1.48
PTPN4-206ENST00000441089 ANKRD33Q7Z3H0 272 aa5.79□□□□□ -1.48
PTPN4-206ENST00000441089 VPS37DQ86XT2 251 aa5.79□□□□□ -1.48
PTPN4-206ENST00000441089 TREML1Q86YW5 311 aa5.79□□□□□ -1.48
PTPN4-206ENST00000441089 MAP4K3Q8IVH8 894 aa5.79□□□□□ -1.48
PTPN4-206ENST00000441089 TMEM199Q8N511 208 aa5.79□□□□□ -1.48
PTPN4-206ENST00000441089 KRTAP4-11Q9BYQ6 195 aa5.79□□□□□ -1.48
PTPN4-206ENST00000441089 NOP58Q9Y2X3 529 aaKnown RBP5.79□□□□□ -1.48
PTPN4-206ENST00000441089 PCDHA11Q9Y5I1 949 aa5.79□□□□□ -1.48
PTPN4-206ENST00000441089 IVNS1ABPQ9Y6Y0 642 aa5.79□□□□□ -1.48
PTPN4-206ENST00000441089 MYH2Q9UKX2 1941 aa5.79□□□□□ -1.48
PTPN4-206ENST00000441089 PLXNA3P51805 1871 aa5.79□□□□□ -1.48
PTPN4-206ENST00000441089 GCN1Q92616 2671 aaKnown RBP5.79□□□□□ -1.48
PTPN4-206ENST00000441089 GAKO14976 1311 aa5.78□□□□□ -1.48
PTPN4-206ENST00000441089 MROH7Q68CQ1 1323 aa5.78□□□□□ -1.48
PTPN4-206ENST00000441089 MYO7AQ13402 2215 aa5.78□□□□□ -1.48
PTPN4-206ENST00000441089 SLC15A5A6NIM6 579 aa5.78□□□□□ -1.48
PTPN4-206ENST00000441089 SMARCA5O60264 1052 aaPredicted RBP5.78□□□□□ -1.48
PTPN4-206ENST00000441089 HMMRO75330 724 aa5.78□□□□□ -1.48
PTPN4-206ENST00000441089 CYBAP13498 195 aa5.78□□□□□ -1.48
PTPN4-206ENST00000441089 EPHA1P21709 976 aa5.78□□□□□ -1.48
PTPN4-206ENST00000441089 HOXA7P31268 230 aaPredicted RBP5.78□□□□□ -1.48
PTPN4-206ENST00000441089 SOX18P35713 384 aa5.78□□□□□ -1.48
PTPN4-206ENST00000441089 GRIK1P39086 918 aa5.78□□□□□ -1.48
PTPN4-206ENST00000441089 GYG1P46976 350 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms