RNA–Protein interactions for RNA: ENST00000440925.1

PLOD3-205, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 4

Gene PLOD3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-205ENST00000440925 ATP6V1DQ9Y5K8 247 aa16.8■□□□□ 0.28
PLOD3-205ENST00000440925 CENPFP49454 3210 aa16.8■□□□□ 0.28
PLOD3-205ENST00000440925 GAS7O60861 476 aa16.79■□□□□ 0.28
PLOD3-205ENST00000440925 SLITRK3O94933 977 aa16.79■□□□□ 0.28
PLOD3-205ENST00000440925 PGK1P00558 417 aa16.79■□□□□ 0.28
PLOD3-205ENST00000440925 GH1P01241 217 aa16.79■□□□□ 0.28
PLOD3-205ENST00000440925 HOXD8P13378 290 aaPredicted RBP16.79■□□□□ 0.28
PLOD3-205ENST00000440925 MNX1P50219 401 aaPredicted RBP16.79■□□□□ 0.28
PLOD3-205ENST00000440925 BEX3Q00994 111 aa16.79■□□□□ 0.28
PLOD3-205ENST00000440925 LAMC2Q13753 1193 aa16.79■□□□□ 0.28
PLOD3-205ENST00000440925 COL13A1Q5TAT6 717 aaPredicted RBP16.79■□□□□ 0.28
PLOD3-205ENST00000440925 DTHD1Q6ZMT9 781 aa16.79■□□□□ 0.28
PLOD3-205ENST00000440925 SPATA32Q96LK8 384 aa16.79■□□□□ 0.28
PLOD3-205ENST00000440925 TEKT3Q9BXF9 490 aa16.79■□□□□ 0.28
PLOD3-205ENST00000440925 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.79■□□□□ 0.28
PLOD3-205ENST00000440925 SYNRGQ9UMZ2 1314 aa16.78■□□□□ 0.28
PLOD3-205ENST00000440925 A0A087X0B3 334 aa16.78■□□□□ 0.28
PLOD3-205ENST00000440925 ZBTB39O15060 712 aa16.78■□□□□ 0.28
PLOD3-205ENST00000440925 NKRFO15226 690 aaKnown RBP eCLIP16.78■□□□□ 0.28
PLOD3-205ENST00000440925 BMP15O95972 392 aa16.78■□□□□ 0.28
PLOD3-205ENST00000440925 NCLP19338 710 aaKnown RBP16.78■□□□□ 0.28
PLOD3-205ENST00000440925 SP4Q02446 784 aa16.78■□□□□ 0.28
PLOD3-205ENST00000440925 UGCGQ16739 394 aa16.78■□□□□ 0.28
PLOD3-205ENST00000440925 ZNF746Q6NUN9 644 aaPredicted RBP16.78■□□□□ 0.28
PLOD3-205ENST00000440925 KRI1Q8N9T8 703 aaKnown RBP16.78■□□□□ 0.28
PLOD3-205ENST00000440925 TMEM87AQ8NBN3 555 aa16.78■□□□□ 0.28
PLOD3-205ENST00000440925 OR6J1Q8NGC5 347 aa16.78■□□□□ 0.28
PLOD3-205ENST00000440925 KAT2BQ92831 832 aa16.78■□□□□ 0.28
PLOD3-205ENST00000440925 SPATA33Q96N06 139 aa16.78■□□□□ 0.28
PLOD3-205ENST00000440925 PNMA5Q96PV4 448 aa16.78■□□□□ 0.28
PLOD3-205ENST00000440925 SCAND2PQ9GZW5 306 aaPredicted RBP16.78■□□□□ 0.28
PLOD3-205ENST00000440925 MLXIPQ9HAP2 919 aa16.78■□□□□ 0.28
PLOD3-205ENST00000440925 JPH1Q9HDC5 661 aaPredicted RBP16.78■□□□□ 0.28
PLOD3-205ENST00000440925 RGL1Q9NZL6 768 aa16.78■□□□□ 0.28
PLOD3-205ENST00000440925 CEP131Q9UPN4 1083 aa16.78■□□□□ 0.28
PLOD3-205ENST00000440925 CHMP2AO43633 222 aa16.77■□□□□ 0.28
PLOD3-205ENST00000440925 ZNF862O60290 1169 aa16.77■□□□□ 0.28
PLOD3-205ENST00000440925 MED24O75448 989 aa16.77■□□□□ 0.28
PLOD3-205ENST00000440925 LGR5O75473 907 aa16.77■□□□□ 0.28
PLOD3-205ENST00000440925 EPHA7Q15375 998 aa16.77■□□□□ 0.28
PLOD3-205ENST00000440925 TLK2Q86UE8 772 aa16.77■□□□□ 0.28
PLOD3-205ENST00000440925 ZNF579Q8NAF0 562 aaKnown RBP16.77■□□□□ 0.28
PLOD3-205ENST00000440925 GIMAP8Q8ND71 665 aaPredicted RBP16.77■□□□□ 0.28
PLOD3-205ENST00000440925 PPTC7Q8NI37 304 aa16.77■□□□□ 0.28
PLOD3-205ENST00000440925 SEPT1Q8WYJ6 367 aa16.77■□□□□ 0.28
PLOD3-205ENST00000440925 FERMT2Q96AC1 680 aa16.77■□□□□ 0.28
PLOD3-205ENST00000440925 SDF4Q9BRK5 362 aa16.77■□□□□ 0.28
PLOD3-205ENST00000440925 C16orf70Q9BSU1 422 aa16.77■□□□□ 0.28
PLOD3-205ENST00000440925 DISC1Q9NRI5 854 aa16.77■□□□□ 0.28
PLOD3-205ENST00000440925 LMBRD1Q9NUN5 540 aa16.77■□□□□ 0.28
PLOD3-205ENST00000440925 LRWD1Q9UFC0 647 aa16.77■□□□□ 0.28
PLOD3-205ENST00000440925 CUTAO60888 179 aa16.76■□□□□ 0.27
PLOD3-205ENST00000440925 PPFIA4O75335 1185 aa16.76■□□□□ 0.27
PLOD3-205ENST00000440925 MMP3P08254 477 aa16.76■□□□□ 0.27
PLOD3-205ENST00000440925 SUPT20HL2P0C7V6 817 aa16.76■□□□□ 0.27
PLOD3-205ENST00000440925 KRT76Q01546 638 aa16.76■□□□□ 0.27
PLOD3-205ENST00000440925 ADALQ6DHV7 355 aa16.76■□□□□ 0.27
PLOD3-205ENST00000440925 NCAPH2Q6IBW4 605 aa16.76■□□□□ 0.27
PLOD3-205ENST00000440925 SWSAP1Q6NVH7 229 aa16.76■□□□□ 0.27
PLOD3-205ENST00000440925 CATSPER3Q86XQ3 398 aa16.76■□□□□ 0.27
PLOD3-205ENST00000440925 CCDC60Q8IWA6 550 aaPredicted RBP16.76■□□□□ 0.27
PLOD3-205ENST00000440925 KCNG4Q8TDN1 519 aa16.76■□□□□ 0.27
PLOD3-205ENST00000440925 DYDC2Q96IM9 177 aa16.76■□□□□ 0.27
PLOD3-205ENST00000440925 EIF2AK1Q9BQI3 630 aaKnown RBP16.76■□□□□ 0.27
PLOD3-205ENST00000440925 CRISPLD2Q9H0B8 497 aa16.76■□□□□ 0.27
PLOD3-205ENST00000440925 RNF208Q9H0X6 261 aa16.76■□□□□ 0.27
PLOD3-205ENST00000440925 GOLPH3LQ9H4A5 285 aa16.76■□□□□ 0.27
PLOD3-205ENST00000440925 PCDHA10Q9Y5I2 948 aa16.76■□□□□ 0.27
PLOD3-205ENST00000440925 ELP1O95163 1332 aa16.75■□□□□ 0.27
PLOD3-205ENST00000440925 MARCH6O60337 910 aa16.75■□□□□ 0.27
PLOD3-205ENST00000440925 PRPF40AO75400 957 aaKnown RBP16.75■□□□□ 0.27
PLOD3-205ENST00000440925 TCF7P36402 384 aaPredicted RBP16.75■□□□□ 0.27
PLOD3-205ENST00000440925 LONP1P36776 959 aaKnown RBP16.75■□□□□ 0.27
PLOD3-205ENST00000440925 PSMC6P62333 389 aa16.75■□□□□ 0.27
PLOD3-205ENST00000440925 GRB10Q13322 594 aa16.75■□□□□ 0.27
PLOD3-205ENST00000440925 LRRC41Q15345 812 aa16.75■□□□□ 0.27
PLOD3-205ENST00000440925 RESP18Q5W5W9 173 aa16.75■□□□□ 0.27
PLOD3-205ENST00000440925 MIER3Q7Z3K6 550 aa16.75■□□□□ 0.27
PLOD3-205ENST00000440925 KCNK18Q7Z418 384 aa16.75■□□□□ 0.27
PLOD3-205ENST00000440925 PPP1R13LQ8WUF5 828 aa16.75■□□□□ 0.27
PLOD3-205ENST00000440925 DEFB118Q96PH6 123 aa16.75■□□□□ 0.27
PLOD3-205ENST00000440925 PANK2Q9BZ23 570 aa16.75■□□□□ 0.27
PLOD3-205ENST00000440925 XPNPEP3Q9NQH7 507 aa16.75■□□□□ 0.27
PLOD3-205ENST00000440925 OGDHLQ9ULD0 1010 aa16.75■□□□□ 0.27
PLOD3-205ENST00000440925 MAFBQ9Y5Q3 323 aaPredicted RBP16.75■□□□□ 0.27
PLOD3-205ENST00000440925 GRIN2DO15399 1336 aa16.74■□□□□ 0.27
PLOD3-205ENST00000440925 FAM237AA0A1B0GTK4 181 aa16.74■□□□□ 0.27
PLOD3-205ENST00000440925 SGPL1O95470 568 aa16.74■□□□□ 0.27
PLOD3-205ENST00000440925 RARBP10826 455 aa16.74■□□□□ 0.27
PLOD3-205ENST00000440925 ME1P48163 572 aa16.74■□□□□ 0.27
PLOD3-205ENST00000440925 CTTNQ14247 550 aaKnown RBP16.74■□□□□ 0.27
PLOD3-205ENST00000440925 HIC1Q14526 733 aa16.74■□□□□ 0.27
PLOD3-205ENST00000440925 KCNA10Q16322 511 aa16.74■□□□□ 0.27
PLOD3-205ENST00000440925 FSCN1Q16658 493 aaKnown RBP16.74■□□□□ 0.27
PLOD3-205ENST00000440925 TRIM50Q86XT4 487 aa16.74■□□□□ 0.27
PLOD3-205ENST00000440925 BANK1Q8NDB2 785 aa16.74■□□□□ 0.27
PLOD3-205ENST00000440925 SYMPKQ92797 1274 aaKnown RBP16.74■□□□□ 0.27
PLOD3-205ENST00000440925 POLR3CQ9BUI4 534 aaPredicted RBP16.74■□□□□ 0.27
PLOD3-205ENST00000440925 CCSER1Q9C0I3 900 aa16.74■□□□□ 0.27
PLOD3-205ENST00000440925 RNPEPQ9H4A4 650 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms