RNA–Protein interactions for RNA: ENST00000440919.1

SATB2-204, Transcript of SATB homeobox 2, humanhuman

TSL 1 (best)

Gene SATB2, Length 2,166 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2-204ENST00000440919 TBC1D5Q92609 795 aa19.4■□□□□ 0.7
SATB2-204ENST00000440919 DDX4Q9NQI0 724 aaKnown RBP19.4■□□□□ 0.7
SATB2-204ENST00000440919 GDF3Q9NR23 364 aa19.4■□□□□ 0.7
SATB2-204ENST00000440919 KIAA1024Q9UPX6 916 aa19.4■□□□□ 0.7
SATB2-204ENST00000440919 ATF5Q9Y2D1 282 aaPredicted RBP19.4■□□□□ 0.7
SATB2-204ENST00000440919 PCDHGC5Q9Y5F6 944 aa19.4■□□□□ 0.7
SATB2-204ENST00000440919 GREB1LQ9C091 1923 aaPredicted RBP19.4■□□□□ 0.7
SATB2-204ENST00000440919 PLA2G4BP0C869 781 aa19.4■□□□□ 0.7
SATB2-204ENST00000440919 CORO7P57737 925 aa19.4■□□□□ 0.7
SATB2-204ENST00000440919 PSTPIP2Q9H939 334 aa19.4■□□□□ 0.7
SATB2-204ENST00000440919 KANSL2Q9H9L4 492 aa19.4■□□□□ 0.7
SATB2-204ENST00000440919 NPHP3-ACAD11A0A0J9YXS1 232 aa19.39■□□□□ 0.69
SATB2-204ENST00000440919 POTEB3A0JP26 581 aa19.39■□□□□ 0.69
SATB2-204ENST00000440919 POTECB2RU33 542 aa19.39■□□□□ 0.69
SATB2-204ENST00000440919 GLI1P08151 1106 aa19.39■□□□□ 0.69
SATB2-204ENST00000440919 SLC16A2P36021 539 aa19.39■□□□□ 0.69
SATB2-204ENST00000440919 POTEBQ6S5H4 581 aa19.39■□□□□ 0.69
SATB2-204ENST00000440919 GBP6Q6ZN66 633 aa19.39■□□□□ 0.69
SATB2-204ENST00000440919 AIPL1Q9NZN9 384 aa19.39■□□□□ 0.69
SATB2-204ENST00000440919 LTBP1Q14766 1721 aa19.39■□□□□ 0.69
SATB2-204ENST00000440919 A0A087X0T9 212 aa19.39■□□□□ 0.69
SATB2-204ENST00000440919 USP17L10C9JJH3 530 aa19.39■□□□□ 0.69
SATB2-204ENST00000440919 FTCDO95954 541 aa19.39■□□□□ 0.69
SATB2-204ENST00000440919 FAM228BP0C875 321 aa19.39■□□□□ 0.69
SATB2-204ENST00000440919 CYP11B2P19099 503 aa19.39■□□□□ 0.69
SATB2-204ENST00000440919 MAGEA9P43362 315 aa19.39■□□□□ 0.69
SATB2-204ENST00000440919 CACNB1Q02641 598 aaPredicted RBP19.39■□□□□ 0.69
SATB2-204ENST00000440919 RAPGEF1Q13905 1077 aa19.39■□□□□ 0.69
SATB2-204ENST00000440919 TTMPQ5BVD1 217 aa19.39■□□□□ 0.69
SATB2-204ENST00000440919 HERC4Q5GLZ8 1057 aaPredicted RBP19.39■□□□□ 0.69
SATB2-204ENST00000440919 GPATCH4Q5T3I0 446 aaKnown RBP19.39■□□□□ 0.69
SATB2-204ENST00000440919 MEI1Q5TIA1 1274 aa19.39■□□□□ 0.69
SATB2-204ENST00000440919 GPBP1Q86WP2 473 aa19.39■□□□□ 0.69
SATB2-204ENST00000440919 IFT20Q8IY31 132 aa19.39■□□□□ 0.69
SATB2-204ENST00000440919 CAPS2Q9BXY5 557 aa19.39■□□□□ 0.69
SATB2-204ENST00000440919 GANQ9H2C0 597 aa19.39■□□□□ 0.69
SATB2-204ENST00000440919 EMILIN3Q9NT22 766 aa19.39■□□□□ 0.69
SATB2-204ENST00000440919 SWAP70Q9UH65 585 aa19.39■□□□□ 0.69
SATB2-204ENST00000440919 SERPINB13Q9UIV8 391 aa19.39■□□□□ 0.69
SATB2-204ENST00000440919 GRIN2DO15399 1336 aa19.38■□□□□ 0.69
SATB2-204ENST00000440919 MYO3BQ8WXR4 1341 aa19.38■□□□□ 0.69
SATB2-204ENST00000440919 FRMD3A2A2Y4 597 aa19.38■□□□□ 0.69
SATB2-204ENST00000440919 GRID2IPA4D2P6 1211 aa19.38■□□□□ 0.69
SATB2-204ENST00000440919 HSF2BPO75031 334 aa19.38■□□□□ 0.69
SATB2-204ENST00000440919 DNAJC21Q5F1R6 531 aaKnown RBP19.38■□□□□ 0.69
SATB2-204ENST00000440919 FAM133AQ8N9E0 248 aa19.38■□□□□ 0.69
SATB2-204ENST00000440919 BBXQ8WY36 941 aaPredicted RBP19.38■□□□□ 0.69
SATB2-204ENST00000440919 NAP1L4Q99733 375 aaKnown RBP19.38■□□□□ 0.69
SATB2-204ENST00000440919 KCNMB3Q9NPA1 279 aa19.38■□□□□ 0.69
SATB2-204ENST00000440919 KIF13BQ9NQT8 1826 aa19.38■□□□□ 0.69
SATB2-204ENST00000440919 SHMT1P34896 483 aa19.37■□□□□ 0.69
SATB2-204ENST00000440919 CARSP49589 748 aaKnown RBP19.37■□□□□ 0.69
SATB2-204ENST00000440919 GTF2IP78347 998 aa19.37■□□□□ 0.69
SATB2-204ENST00000440919 KCTD1Q719H9 257 aa19.37■□□□□ 0.69
SATB2-204ENST00000440919 ARL8AQ96BM9 186 aa19.37■□□□□ 0.69
SATB2-204ENST00000440919 INPP4AQ96PE3 977 aaPredicted RBP19.37■□□□□ 0.69
SATB2-204ENST00000440919 ZIM3Q96PE6 472 aa19.37■□□□□ 0.69
SATB2-204ENST00000440919 RUFY1Q96T51 708 aa19.37■□□□□ 0.69
SATB2-204ENST00000440919 PACSIN1Q9BY11 444 aa19.37■□□□□ 0.69
SATB2-204ENST00000440919 ADAMTS1Q9UHI8 967 aa19.37■□□□□ 0.69
SATB2-204ENST00000440919 HEXIM1O94992 359 aaKnown RBP19.37■□□□□ 0.69
SATB2-204ENST00000440919 ARID5AQ03989 594 aa19.37■□□□□ 0.69
SATB2-204ENST00000440919 KLHL30Q0D2K2 578 aa19.37■□□□□ 0.69
SATB2-204ENST00000440919 ADAM9Q13443 819 aa19.37■□□□□ 0.69
SATB2-204ENST00000440919 KIAA0753Q2KHM9 967 aa19.37■□□□□ 0.69
SATB2-204ENST00000440919 EDRF1Q3B7T1 1238 aa19.37■□□□□ 0.69
SATB2-204ENST00000440919 PPP4R3CPQ6ZMV5 832 aa19.37■□□□□ 0.69
SATB2-204ENST00000440919 SP8Q8IXZ3 490 aa19.37■□□□□ 0.69
SATB2-204ENST00000440919 UIMC1Q96RL1 719 aa19.37■□□□□ 0.69
SATB2-204ENST00000440919 QSER1Q2KHR3 1735 aa19.37■□□□□ 0.69
SATB2-204ENST00000440919 ZSCAN5CA6NGD5 496 aaPredicted RBP19.36■□□□□ 0.69
SATB2-204ENST00000440919 SLC26A4O43511 780 aa19.36■□□□□ 0.69
SATB2-204ENST00000440919 DNA2P51530 1060 aa19.36■□□□□ 0.69
SATB2-204ENST00000440919 ASIC2Q16515 512 aa19.36■□□□□ 0.69
SATB2-204ENST00000440919 ARSHQ5FYA8 562 aa19.36■□□□□ 0.69
SATB2-204ENST00000440919 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.36■□□□□ 0.69
SATB2-204ENST00000440919 EPB41L5Q9HCM4 733 aa19.36■□□□□ 0.69
SATB2-204ENST00000440919 NFU1Q9UMS0 254 aa19.36■□□□□ 0.69
SATB2-204ENST00000440919 PACSIN2Q9UNF0 486 aaPredicted RBP19.36■□□□□ 0.69
SATB2-204ENST00000440919 PITPNM2Q9BZ72 1349 aa19.36■□□□□ 0.69
SATB2-204ENST00000440919 USP17L15C9J2P7 530 aa19.36■□□□□ 0.69
SATB2-204ENST00000440919 USP17L13C9JLJ4 530 aa19.36■□□□□ 0.69
SATB2-204ENST00000440919 USP17L11C9JVI0 530 aa19.36■□□□□ 0.69
SATB2-204ENST00000440919 USP17L18D6R9N7 530 aa19.36■□□□□ 0.69
SATB2-204ENST00000440919 USP17L22D6RA61 530 aa19.36■□□□□ 0.69
SATB2-204ENST00000440919 USP17L17D6RBQ6 530 aa19.36■□□□□ 0.69
SATB2-204ENST00000440919 USP17L19D6RCP7 530 aa19.36■□□□□ 0.69
SATB2-204ENST00000440919 USP17L20D6RJB6 530 aa19.36■□□□□ 0.69
SATB2-204ENST00000440919 ANKRD65E5RJM6 399 aa19.36■□□□□ 0.69
SATB2-204ENST00000440919 PPEF1O14829 653 aaPredicted RBP19.36■□□□□ 0.69
SATB2-204ENST00000440919 EIF3HO15372 352 aaKnown RBP eCLIP19.36■□□□□ 0.69
SATB2-204ENST00000440919 MED24O75448 989 aa19.36■□□□□ 0.69
SATB2-204ENST00000440919 SLC12A3P55017 1021 aa19.36■□□□□ 0.69
SATB2-204ENST00000440919 USP17L24Q0WX57 530 aa19.36■□□□□ 0.69
SATB2-204ENST00000440919 KCNH2Q12809 1159 aa19.36■□□□□ 0.69
SATB2-204ENST00000440919 PAK2Q13177 524 aa19.36■□□□□ 0.69
SATB2-204ENST00000440919 SF3B2Q13435 895 aaKnown RBP19.36■□□□□ 0.69
SATB2-204ENST00000440919 USP17L6PQ6QN14 398 aa19.36■□□□□ 0.69
SATB2-204ENST00000440919 EHD4Q9H223 541 aa19.36■□□□□ 0.69
SATB2-204ENST00000440919 LRRC37AA6NMS7 1700 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms