RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 ERGIC2Q96RQ1 377 aa13.07□□□□□ -0.32
SMAD3-202ENST00000439724 REEP2Q9BRK0 252 aa13.07□□□□□ -0.32
SMAD3-202ENST00000439724 NOC4LQ9BVI4 516 aaKnown RBP13.07□□□□□ -0.32
SMAD3-202ENST00000439724 NUP58Q9BVL2 599 aa13.07□□□□□ -0.32
SMAD3-202ENST00000439724 ABHD10Q9NUJ1 306 aa13.07□□□□□ -0.32
SMAD3-202ENST00000439724 RGL1Q9NZL6 768 aa13.07□□□□□ -0.32
SMAD3-202ENST00000439724 POLR2AP24928 1970 aaKnown RBP13.06□□□□□ -0.32
SMAD3-202ENST00000439724 IPO5O00410 1097 aaKnown RBP13.06□□□□□ -0.32
SMAD3-202ENST00000439724 SLITRK3O94933 977 aa13.06□□□□□ -0.32
SMAD3-202ENST00000439724 ITGB5P18084 799 aa13.06□□□□□ -0.32
SMAD3-202ENST00000439724 ETF1P62495 437 aaKnown RBP13.06□□□□□ -0.32
SMAD3-202ENST00000439724 FKBP3Q00688 224 aaKnown RBP13.06□□□□□ -0.32
SMAD3-202ENST00000439724 CACNB1Q02641 598 aaPredicted RBP13.06□□□□□ -0.32
SMAD3-202ENST00000439724 TBC1D8BQ0IIM8 1120 aa13.06□□□□□ -0.32
SMAD3-202ENST00000439724 MAN2A1Q16706 1144 aa13.06□□□□□ -0.32
SMAD3-202ENST00000439724 FIGNQ5HY92 759 aa13.06□□□□□ -0.32
SMAD3-202ENST00000439724 FKBP15Q5T1M5 1219 aa13.06□□□□□ -0.32
SMAD3-202ENST00000439724 PPP4R3CPQ6ZMV5 832 aa13.06□□□□□ -0.32
SMAD3-202ENST00000439724 TOGARAM2Q6ZUX3 1019 aa13.06□□□□□ -0.32
SMAD3-202ENST00000439724 TMTC1Q8IUR5 882 aa13.06□□□□□ -0.32
SMAD3-202ENST00000439724 REPS2Q8NFH8 660 aa13.06□□□□□ -0.32
SMAD3-202ENST00000439724 IL31RAQ8NI17 732 aa13.06□□□□□ -0.32
SMAD3-202ENST00000439724 SCFD1Q8WVM8 642 aa13.06□□□□□ -0.32
SMAD3-202ENST00000439724 ATG4CQ96DT6 458 aa13.06□□□□□ -0.32
SMAD3-202ENST00000439724 DYDC2Q96IM9 177 aa13.06□□□□□ -0.32
SMAD3-202ENST00000439724 CEP63Q96MT8 703 aa13.06□□□□□ -0.32
SMAD3-202ENST00000439724 FGFBP2Q9BYJ0 223 aa13.06□□□□□ -0.32
SMAD3-202ENST00000439724 TTYH3Q9C0H2 523 aa13.06□□□□□ -0.32
SMAD3-202ENST00000439724 BHMT2Q9H2M3 363 aa13.06□□□□□ -0.32
SMAD3-202ENST00000439724 UNC45AQ9H3U1 944 aa13.06□□□□□ -0.32
SMAD3-202ENST00000439724 CAPN11Q9UMQ6 739 aa13.06□□□□□ -0.32
SMAD3-202ENST00000439724 ADAMTS5Q9UNA0 930 aa13.06□□□□□ -0.32
SMAD3-202ENST00000439724 ZHX2Q9Y6X8 837 aa13.06□□□□□ -0.32
SMAD3-202ENST00000439724 LOC285556D6RIA3 1793 aa13.06□□□□□ -0.32
SMAD3-202ENST00000439724 SOWAHDA6NJG2 315 aa13.05□□□□□ -0.32
SMAD3-202ENST00000439724 PES1O00541 588 aaKnown RBP13.05□□□□□ -0.32
SMAD3-202ENST00000439724 CCDC175P0C221 793 aa13.05□□□□□ -0.32
SMAD3-202ENST00000439724 GAP43P17677 238 aa13.05□□□□□ -0.32
SMAD3-202ENST00000439724 DSG3P32926 999 aa13.05□□□□□ -0.32
SMAD3-202ENST00000439724 KRT9P35527 623 aa13.05□□□□□ -0.32
SMAD3-202ENST00000439724 RPS6P62753 249 aaKnown RBP13.05□□□□□ -0.32
SMAD3-202ENST00000439724 CTTNQ14247 550 aaKnown RBP13.05□□□□□ -0.32
SMAD3-202ENST00000439724 EDRF1Q3B7T1 1238 aa13.05□□□□□ -0.32
SMAD3-202ENST00000439724 VWA3BQ502W6 1294 aa13.05□□□□□ -0.32
SMAD3-202ENST00000439724 TRIM65Q6PJ69 517 aa13.05□□□□□ -0.32
SMAD3-202ENST00000439724 CYP26C1Q6V0L0 522 aa13.05□□□□□ -0.32
SMAD3-202ENST00000439724 RAD9BQ6WBX8 426 aa13.05□□□□□ -0.32
SMAD3-202ENST00000439724 EPM2AIP1Q7L775 607 aaPredicted RBP13.05□□□□□ -0.32
SMAD3-202ENST00000439724 SFR1Q86XK3 245 aa13.05□□□□□ -0.32
SMAD3-202ENST00000439724 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.05□□□□□ -0.326e-6■□□□□ 9
SMAD3-202ENST00000439724 ZNF592Q92610 1267 aa13.05□□□□□ -0.32
SMAD3-202ENST00000439724 TRERF1Q96PN7 1200 aa13.05□□□□□ -0.32
SMAD3-202ENST00000439724 DNAJC7Q99615 494 aa13.05□□□□□ -0.32
SMAD3-202ENST00000439724 RUSC1Q9BVN2 902 aa13.05□□□□□ -0.32
SMAD3-202ENST00000439724 MAF1Q9H063 256 aa13.05□□□□□ -0.32
SMAD3-202ENST00000439724 KCTD10Q9H3F6 313 aa13.05□□□□□ -0.32
SMAD3-202ENST00000439724 JADE2Q9NQC1 790 aa13.05□□□□□ -0.32
SMAD3-202ENST00000439724 KCNH7Q9NS40 1196 aa13.05□□□□□ -0.32
SMAD3-202ENST00000439724 LUC7L2Q9Y383 392 aaKnown RBP13.05□□□□□ -0.32
SMAD3-202ENST00000439724 PHLPP2Q6ZVD8 1323 aa13.05□□□□□ -0.32
SMAD3-202ENST00000439724 MYPNQ86TC9 1320 aa13.05□□□□□ -0.32
SMAD3-202ENST00000439724 A0A1W2PQJ5 194 aa13.04□□□□□ -0.32
SMAD3-202ENST00000439724 TTC26A0AVF1 554 aa13.04□□□□□ -0.32
SMAD3-202ENST00000439724 RNF225M0QZC1 329 aaPredicted RBP13.04□□□□□ -0.32
SMAD3-202ENST00000439724 ATP2A1O14983 1001 aa13.04□□□□□ -0.32
SMAD3-202ENST00000439724 CTIFO43310 598 aaKnown RBP13.04□□□□□ -0.32
SMAD3-202ENST00000439724 CHMP2AO43633 222 aa13.04□□□□□ -0.32
SMAD3-202ENST00000439724 TBCAO75347 108 aaKnown RBP13.04□□□□□ -0.32
SMAD3-202ENST00000439724 GNA14O95837 355 aa13.04□□□□□ -0.32
SMAD3-202ENST00000439724 HMGCS2P54868 508 aa13.04□□□□□ -0.32
SMAD3-202ENST00000439724 MARSP56192 900 aaKnown RBP13.04□□□□□ -0.32
SMAD3-202ENST00000439724 MTF1Q14872 753 aa13.04□□□□□ -0.32
SMAD3-202ENST00000439724 PGM5Q15124 567 aa13.04□□□□□ -0.32
SMAD3-202ENST00000439724 SYCP1Q15431 976 aa13.04□□□□□ -0.32
SMAD3-202ENST00000439724 BMT2Q1RMZ1 405 aa13.04□□□□□ -0.32
SMAD3-202ENST00000439724 TKFCQ3LXA3 575 aa13.04□□□□□ -0.32
SMAD3-202ENST00000439724 SH3D19Q5HYK7 790 aa13.04□□□□□ -0.32
SMAD3-202ENST00000439724 RINT1Q6NUQ1 792 aa13.04□□□□□ -0.32
SMAD3-202ENST00000439724 XRRA1Q6P2D8 792 aa13.04□□□□□ -0.32
SMAD3-202ENST00000439724 SLC30A10Q6XR72 485 aa13.04□□□□□ -0.32
SMAD3-202ENST00000439724 RNF207Q6ZRF8 634 aa13.04□□□□□ -0.32
SMAD3-202ENST00000439724 TPH2Q8IWU9 490 aa13.04□□□□□ -0.32
SMAD3-202ENST00000439724 OR8K1Q8NGG5 319 aa13.04□□□□□ -0.32
SMAD3-202ENST00000439724 EEF2KMTQ96G04 330 aa13.04□□□□□ -0.32
SMAD3-202ENST00000439724 NACC1Q96RE7 527 aa13.04□□□□□ -0.32
SMAD3-202ENST00000439724 TAAR1Q96RJ0 339 aa13.04□□□□□ -0.32
SMAD3-202ENST00000439724 FHDC1Q9C0D6 1143 aaPredicted RBP13.04□□□□□ -0.32
SMAD3-202ENST00000439724 NDST4Q9H3R1 872 aa13.04□□□□□ -0.32
SMAD3-202ENST00000439724 AGO4Q9HCK5 861 aaKnown RBP13.04□□□□□ -0.32
SMAD3-202ENST00000439724 OLFML3Q9NRN5 406 aa13.04□□□□□ -0.32
SMAD3-202ENST00000439724 ADARB2Q9NS39 739 aaKnown RBP13.04□□□□□ -0.32
SMAD3-202ENST00000439724 HOMER2Q9NSB8 354 aa13.04□□□□□ -0.32
SMAD3-202ENST00000439724 RNF146Q9NTX7 359 aa13.04□□□□□ -0.32
SMAD3-202ENST00000439724 KCND2Q9NZV8 630 aa13.04□□□□□ -0.32
SMAD3-202ENST00000439724 TBC1D7Q9P0N9 293 aa13.04□□□□□ -0.32
SMAD3-202ENST00000439724 COL4A3BPQ9Y5P4 624 aa13.04□□□□□ -0.32
SMAD3-202ENST00000439724 ADGRG1Q9Y653 693 aa13.04□□□□□ -0.32
SMAD3-202ENST00000439724 PTPRFP10586 1907 aa13.04□□□□□ -0.32
SMAD3-202ENST00000439724 OTOFQ9HC10 1997 aa13.03□□□□□ -0.32
SMAD3-202ENST00000439724 TRAF5O00463 557 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms