RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 LRRC14Q15048 493 aa9.89□□□□□ -0.83
COPB1-202ENST00000439561 NAB2Q15742 525 aa9.89□□□□□ -0.83
COPB1-202ENST00000439561 SLC18A3Q16572 532 aa9.89□□□□□ -0.83
COPB1-202ENST00000439561 ZFYVE27Q5T4F4 411 aa9.89□□□□□ -0.83
COPB1-202ENST00000439561 TRIM68Q6AZZ1 485 aa9.89□□□□□ -0.83
COPB1-202ENST00000439561 PPP4R3AQ6IN85 833 aa9.89□□□□□ -0.83
COPB1-202ENST00000439561 TEX11Q8IYF3 940 aa9.89□□□□□ -0.83
COPB1-202ENST00000439561 LRRC47Q8N1G4 583 aaKnown RBP9.89□□□□□ -0.83
COPB1-202ENST00000439561 PURBQ96QR8 312 aaKnown RBP9.89□□□□□ -0.83
COPB1-202ENST00000439561 TMEM47Q9BQJ4 181 aa9.89□□□□□ -0.83
COPB1-202ENST00000439561 NSRP1Q9H0G5 558 aaKnown RBP9.89□□□□□ -0.83
COPB1-202ENST00000439561 GDF3Q9NR23 364 aa9.89□□□□□ -0.83
COPB1-202ENST00000439561 ATP8A2Q9NTI2 1148 aa9.89□□□□□ -0.83
COPB1-202ENST00000439561 BTG4Q9NY30 223 aa9.89□□□□□ -0.83
COPB1-202ENST00000439561 BARHL2Q9NY43 387 aa9.89□□□□□ -0.83
COPB1-202ENST00000439561 LEMD3Q9Y2U8 911 aa9.89□□□□□ -0.83
COPB1-202ENST00000439561 C5P01031 1676 aa9.89□□□□□ -0.83
COPB1-202ENST00000439561 ATRNO75882 1429 aa9.88□□□□□ -0.83
COPB1-202ENST00000439561 GFPT2O94808 682 aa9.88□□□□□ -0.83
COPB1-202ENST00000439561 CUL1Q13616 776 aa9.88□□□□□ -0.83
COPB1-202ENST00000439561 ARHGAP44Q17R89 818 aa9.88□□□□□ -0.83
COPB1-202ENST00000439561 FIGNQ5HY92 759 aa9.88□□□□□ -0.83
COPB1-202ENST00000439561 GUF1Q8N442 669 aaKnown RBP9.88□□□□□ -0.83
COPB1-202ENST00000439561 C4orf32Q8N8J7 132 aa9.88□□□□□ -0.83
COPB1-202ENST00000439561 CTNNBL1Q8WYA6 563 aaPredicted RBP9.88□□□□□ -0.83
COPB1-202ENST00000439561 ANKS1AQ92625 1134 aa9.88□□□□□ -0.83
COPB1-202ENST00000439561 EYA3Q99504 573 aa9.88□□□□□ -0.83
COPB1-202ENST00000439561 DONSONQ9NYP3 566 aa9.88□□□□□ -0.83
COPB1-202ENST00000439561 ARMCX3Q9UH62 379 aaPredicted RBP9.88□□□□□ -0.83
COPB1-202ENST00000439561 ANAPC4Q9UJX5 808 aa9.88□□□□□ -0.83
COPB1-202ENST00000439561 AMFRQ9UKV5 643 aa9.88□□□□□ -0.83
COPB1-202ENST00000439561 ZNF652Q9Y2D9 606 aa9.88□□□□□ -0.83
COPB1-202ENST00000439561 PTPN22Q9Y2R2 807 aa9.88□□□□□ -0.83
COPB1-202ENST00000439561 SSU72P8A0A1W2PR75 194 aa9.88□□□□□ -0.83
COPB1-202ENST00000439561 GRID2IPA4D2P6 1211 aa9.88□□□□□ -0.83
COPB1-202ENST00000439561 DCDC2CA8MYV0 355 aa9.88□□□□□ -0.83
COPB1-202ENST00000439561 E9PMD0 336 aa9.88□□□□□ -0.83
COPB1-202ENST00000439561 CLGNO14967 610 aa9.88□□□□□ -0.83
COPB1-202ENST00000439561 ADCY7P51828 1080 aa9.88□□□□□ -0.83
COPB1-202ENST00000439561 CDK17Q00537 523 aa9.88□□□□□ -0.83
COPB1-202ENST00000439561 ZNF844Q08AG5 666 aa9.88□□□□□ -0.83
COPB1-202ENST00000439561 BIRC3Q13489 604 aa9.88□□□□□ -0.83
COPB1-202ENST00000439561 PLS1Q14651 629 aa9.88□□□□□ -0.83
COPB1-202ENST00000439561 EXOC3L4Q17RC7 722 aa9.88□□□□□ -0.83
COPB1-202ENST00000439561 CENPPQ6IPU0 288 aa9.88□□□□□ -0.83
COPB1-202ENST00000439561 SMIM5Q71RC9 77 aa9.88□□□□□ -0.83
COPB1-202ENST00000439561 FUKQ8N0W3 1084 aa9.88□□□□□ -0.83
COPB1-202ENST00000439561 RUBCNQ92622 972 aa9.88□□□□□ -0.83
COPB1-202ENST00000439561 CHMP6Q96FZ7 201 aa9.88□□□□□ -0.83
COPB1-202ENST00000439561 ZNF287Q9HBT7 754 aa9.88□□□□□ -0.83
COPB1-202ENST00000439561 STXBP3O00186 592 aa9.88□□□□□ -0.83
COPB1-202ENST00000439561 MEIS1O00470 390 aa9.88□□□□□ -0.83
COPB1-202ENST00000439561 CLIC2O15247 247 aa9.88□□□□□ -0.83
COPB1-202ENST00000439561 PCP11498 1178 aaKnown RBP9.88□□□□□ -0.83
COPB1-202ENST00000439561 SLC9A1P19634 815 aa9.88□□□□□ -0.83
COPB1-202ENST00000439561 CALRP27797 417 aaKnown RBP9.88□□□□□ -0.83
COPB1-202ENST00000439561 FLT3P36888 993 aa9.88□□□□□ -0.83
COPB1-202ENST00000439561 PTK2Q05397 1052 aa9.88□□□□□ -0.83
COPB1-202ENST00000439561 ITIH3Q06033 890 aa9.88□□□□□ -0.83
COPB1-202ENST00000439561 KCNH2Q12809 1159 aa9.88□□□□□ -0.83
COPB1-202ENST00000439561 COASYQ13057 564 aa9.88□□□□□ -0.83
COPB1-202ENST00000439561 LRRC15Q8TF66 581 aa9.88□□□□□ -0.83
COPB1-202ENST00000439561 TRIM6Q9C030 488 aaPredicted RBP9.88□□□□□ -0.83
COPB1-202ENST00000439561 ISCUQ9H1K1 167 aa9.88□□□□□ -0.83
COPB1-202ENST00000439561 AZI2Q9H6S1 392 aa9.88□□□□□ -0.83
COPB1-202ENST00000439561 DNAJC17Q9NVM6 304 aaKnown RBP9.88□□□□□ -0.83
COPB1-202ENST00000439561 PCDHA12Q9UN75 941 aa9.88□□□□□ -0.83
COPB1-202ENST00000439561 GSTTP1A0A1W2PQM5 241 aa9.87□□□□□ -0.83
COPB1-202ENST00000439561 XRCC5P13010 732 aaKnown RBP9.87□□□□□ -0.83
COPB1-202ENST00000439561 ANKRD20A8PQ5CZ79 823 aa9.87□□□□□ -0.83
COPB1-202ENST00000439561 ZNF662Q6ZS27 426 aa9.87□□□□□ -0.83
COPB1-202ENST00000439561 METTL13Q8N6R0 699 aa9.87□□□□□ -0.83
COPB1-202ENST00000439561 RDH13Q8NBN7 331 aa9.87□□□□□ -0.83
COPB1-202ENST00000439561 HDAC9Q9UKV0 1011 aa9.87□□□□□ -0.83
COPB1-202ENST00000439561 DAAM1Q9Y4D1 1078 aa9.87□□□□□ -0.83
COPB1-202ENST00000439561 NWD2Q9ULI1 1742 aa9.87□□□□□ -0.83
COPB1-202ENST00000439561 F8W031 263 aaPredicted RBP9.87□□□□□ -0.83
COPB1-202ENST00000439561 DNM1LO00429 736 aa9.87□□□□□ -0.83
COPB1-202ENST00000439561 TRIM37O94972 964 aa9.87□□□□□ -0.83
COPB1-202ENST00000439561 CHN1P15882 459 aa9.87□□□□□ -0.83
COPB1-202ENST00000439561 IL6STP40189 918 aaPredicted RBP9.87□□□□□ -0.83
COPB1-202ENST00000439561 FNTAP49354 379 aa9.87□□□□□ -0.83
COPB1-202ENST00000439561 ERFEQ4G0M1 354 aa9.87□□□□□ -0.83
COPB1-202ENST00000439561 KIF2BQ8N4N8 673 aa9.87□□□□□ -0.83
COPB1-202ENST00000439561 KCNV2Q8TDN2 545 aa9.87□□□□□ -0.83
COPB1-202ENST00000439561 BAP1Q92560 729 aa9.87□□□□□ -0.83
COPB1-202ENST00000439561 CELF1Q92879 486 aaKnown RBP9.87□□□□□ -0.83
COPB1-202ENST00000439561 NSUN4Q96CB9 384 aaKnown RBP9.87□□□□□ -0.83
COPB1-202ENST00000439561 PBKQ96KB5 322 aa9.87□□□□□ -0.83
COPB1-202ENST00000439561 FAM84BQ96KN1 310 aaPredicted RBP9.87□□□□□ -0.83
COPB1-202ENST00000439561 NUDT12Q9BQG2 462 aa9.87□□□□□ -0.83
COPB1-202ENST00000439561 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.87□□□□□ -0.836e-7■■■□□ 15.6
COPB1-202ENST00000439561 CARD10Q9BWT7 1032 aa9.87□□□□□ -0.83
COPB1-202ENST00000439561 RAB17Q9H0T7 212 aa9.87□□□□□ -0.83
COPB1-202ENST00000439561 RIC8AQ9NPQ8 531 aa9.87□□□□□ -0.83
COPB1-202ENST00000439561 CCDC87Q9NVE4 849 aa9.87□□□□□ -0.83
COPB1-202ENST00000439561 RASAL2Q9UJF2 1139 aa9.87□□□□□ -0.83
COPB1-202ENST00000439561 L3MBTL1Q9Y468 752 aa9.87□□□□□ -0.83
COPB1-202ENST00000439561 C1orf167Q5SNV9 1468 aa9.87□□□□□ -0.83
COPB1-202ENST00000439561 CYTH3O43739 400 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms