RNA–Protein interactions for RNA: ENST00000439555.2

IRF1-204, Transcript of interferon regulatory factor 1, humanhuman

TSL 5

Gene IRF1, Length 524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-204ENST00000439555 RAD9AQ99638 391 aa13.17□□□□□ -0.3
IRF1-204ENST00000439555 GPR20Q99678 358 aa13.17□□□□□ -0.3
IRF1-204ENST00000439555 LRRC2Q9BYS8 371 aa13.17□□□□□ -0.3
IRF1-204ENST00000439555 PRKAG3Q9UGI9 489 aa13.17□□□□□ -0.3
IRF1-204ENST00000439555 MICAL3Q7RTP6 2002 aa13.17□□□□□ -0.3
IRF1-204ENST00000439555 NLRC5Q86WI3 1866 aa13.16□□□□□ -0.3
IRF1-204ENST00000439555 TRIOO75962 3097 aa13.16□□□□□ -0.3
IRF1-204ENST00000439555 MYH7BA7E2Y1 1941 aa13.16□□□□□ -0.3
IRF1-204ENST00000439555 KIAA1217Q5T5P2 1943 aa13.16□□□□□ -0.3
IRF1-204ENST00000439555 ABHD14A-ACY1A0A1B0GW23 586 aa13.16□□□□□ -0.3
IRF1-204ENST00000439555 SPDYE3A6NKU9 549 aa13.16□□□□□ -0.3
IRF1-204ENST00000439555 hCG_1984214I3L0E3 225 aa13.16□□□□□ -0.3
IRF1-204ENST00000439555 ZBTB43O43298 467 aa13.16□□□□□ -0.3
IRF1-204ENST00000439555 DCXO43602 365 aa13.16□□□□□ -0.3
IRF1-204ENST00000439555 CAND2O75155 1236 aa13.16□□□□□ -0.3
IRF1-204ENST00000439555 LGALS2P05162 132 aa13.16□□□□□ -0.3
IRF1-204ENST00000439555 GNAT1P11488 350 aa13.16□□□□□ -0.3
IRF1-204ENST00000439555 RTN1Q16799 776 aa13.16□□□□□ -0.3
IRF1-204ENST00000439555 ADCK5Q3MIX3 580 aa13.16□□□□□ -0.3
IRF1-204ENST00000439555 PPP1R18Q6NYC8 613 aa13.16□□□□□ -0.3
IRF1-204ENST00000439555 CNKSR3Q6P9H4 555 aa13.16□□□□□ -0.3
IRF1-204ENST00000439555 CYFIP1Q7L576 1253 aa13.16□□□□□ -0.3
IRF1-204ENST00000439555 SKAP1Q86WV1 359 aa13.16□□□□□ -0.3
IRF1-204ENST00000439555 FBXL16Q8N461 479 aa13.16□□□□□ -0.3
IRF1-204ENST00000439555 CCDC82Q8N4S0 544 aa13.16□□□□□ -0.3
IRF1-204ENST00000439555 ZNF713Q8N859 430 aaPredicted RBP13.16□□□□□ -0.3
IRF1-204ENST00000439555 NEK9Q8TD19 979 aa13.16□□□□□ -0.3
IRF1-204ENST00000439555 CCDC136Q96JN2 1154 aa13.16□□□□□ -0.3
IRF1-204ENST00000439555 ZFP91Q96JP5 570 aaPredicted RBP13.16□□□□□ -0.3
IRF1-204ENST00000439555 TGS1Q96RS0 853 aaKnown RBP13.16□□□□□ -0.3
IRF1-204ENST00000439555 GLT8D2Q9H1C3 349 aa13.16□□□□□ -0.3
IRF1-204ENST00000439555 EHMT1Q9H9B1 1298 aa13.16□□□□□ -0.3
IRF1-204ENST00000439555 ZNF215Q9UL58 517 aaPredicted RBP13.16□□□□□ -0.3
IRF1-204ENST00000439555 UBIAD1Q9Y5Z9 338 aa13.16□□□□□ -0.3
IRF1-204ENST00000439555 EMSYQ7Z589 1322 aa13.15□□□□□ -0.3
IRF1-204ENST00000439555 USP34Q70CQ2 3546 aa13.15□□□□□ -0.3
IRF1-204ENST00000439555 RALGAPA2Q2PPJ7 1873 aa13.15□□□□□ -0.3
IRF1-204ENST00000439555 CCDC196A0A1B0GTZ2 297 aa13.15□□□□□ -0.3
IRF1-204ENST00000439555 C17orf102A2RUQ5 167 aa13.15□□□□□ -0.3
IRF1-204ENST00000439555 EPB41L2O43491 1005 aaKnown RBP13.15□□□□□ -0.3
IRF1-204ENST00000439555 NBNO60934 754 aa13.15□□□□□ -0.3
IRF1-204ENST00000439555 GJB5O95377 273 aa13.15□□□□□ -0.3
IRF1-204ENST00000439555 FOSP01100 380 aaPredicted RBP13.15□□□□□ -0.3
IRF1-204ENST00000439555 SSTR3P32745 418 aaPredicted RBP13.15□□□□□ -0.3
IRF1-204ENST00000439555 WDR5P61964 334 aaKnown RBP13.15□□□□□ -0.3
IRF1-204ENST00000439555 PTCRAQ6ISU1 281 aaPredicted RBP13.15□□□□□ -0.3
IRF1-204ENST00000439555 TRAF7Q6Q0C0 670 aa13.15□□□□□ -0.3
IRF1-204ENST00000439555 HEATR3Q7Z4Q2 680 aa13.15□□□□□ -0.3
IRF1-204ENST00000439555 ATP6V0A1Q93050 837 aa13.15□□□□□ -0.3
IRF1-204ENST00000439555 ZBED2Q9BTP6 218 aa13.15□□□□□ -0.3
IRF1-204ENST00000439555 BCAS3Q9H6U6 928 aa13.15□□□□□ -0.3
IRF1-204ENST00000439555 JADE2Q9NQC1 790 aa13.15□□□□□ -0.3
IRF1-204ENST00000439555 BRPF3Q9ULD4 1205 aa13.15□□□□□ -0.3
IRF1-204ENST00000439555 PCDHA6Q9UN73 950 aa13.15□□□□□ -0.3
IRF1-204ENST00000439555 FAM50BQ9Y247 325 aa13.15□□□□□ -0.3
IRF1-204ENST00000439555 PCDHA8Q9Y5H6 950 aa13.15□□□□□ -0.3
IRF1-204ENST00000439555 LCHNA4D1U4 455 aa13.14□□□□□ -0.31
IRF1-204ENST00000439555 C19orf67A6NJJ6 358 aa13.14□□□□□ -0.31
IRF1-204ENST00000439555 SORBS3O60504 671 aa13.14□□□□□ -0.31
IRF1-204ENST00000439555 SMIM10L2AP0DMW4 78 aa13.14□□□□□ -0.31
IRF1-204ENST00000439555 SMIM10L2BP0DMW5 78 aa13.14□□□□□ -0.31
IRF1-204ENST00000439555 IL9P15248 144 aa13.14□□□□□ -0.31
IRF1-204ENST00000439555 KCNA2P16389 499 aa13.14□□□□□ -0.31
IRF1-204ENST00000439555 ITGB5P18084 799 aa13.14□□□□□ -0.31
IRF1-204ENST00000439555 HSPA4P34932 840 aa13.14□□□□□ -0.31
IRF1-204ENST00000439555 ZNF200P98182 395 aaPredicted RBP13.14□□□□□ -0.31
IRF1-204ENST00000439555 MTMR1Q13613 665 aa13.14□□□□□ -0.31
IRF1-204ENST00000439555 IKBKEQ14164 716 aa13.14□□□□□ -0.31
IRF1-204ENST00000439555 HIC1Q14526 733 aa13.14□□□□□ -0.31
IRF1-204ENST00000439555 ZNF618Q5T7W0 954 aa13.14□□□□□ -0.31
IRF1-204ENST00000439555 SEPT1Q8WYJ6 367 aa13.14□□□□□ -0.31
IRF1-204ENST00000439555 MFSD14AQ96MC6 490 aa13.14□□□□□ -0.31
IRF1-204ENST00000439555 UIMC1Q96RL1 719 aa13.14□□□□□ -0.31
IRF1-204ENST00000439555 UPF3BQ9BZI7 483 aaKnown RBP13.14□□□□□ -0.31
IRF1-204ENST00000439555 RNPEPQ9H4A4 650 aa13.14□□□□□ -0.31
IRF1-204ENST00000439555 RIC8AQ9NPQ8 531 aa13.14□□□□□ -0.31
IRF1-204ENST00000439555 FAM217BQ9NTX9 383 aaPredicted RBP13.14□□□□□ -0.31
IRF1-204ENST00000439555 V9GY48 417 aaPredicted RBP13.14□□□□□ -0.31
IRF1-204ENST00000439555 CNTNAP5Q8WYK1 1306 aa13.13□□□□□ -0.31
IRF1-204ENST00000439555 NRCAMQ92823 1304 aa13.13□□□□□ -0.31
IRF1-204ENST00000439555 hCG_1642624A0A1W2PR95 340 aa13.13□□□□□ -0.31
IRF1-204ENST00000439555 LINC01553A4QN01 128 aa13.13□□□□□ -0.31
IRF1-204ENST00000439555 RSPH10B2B2RC85 870 aa13.13□□□□□ -0.31
IRF1-204ENST00000439555 LGR5O75473 907 aa13.13□□□□□ -0.31
IRF1-204ENST00000439555 REC8O95072 547 aa13.13□□□□□ -0.31
IRF1-204ENST00000439555 RSPH10BP0C881 870 aa13.13□□□□□ -0.31
IRF1-204ENST00000439555 KCNA5P22460 613 aa13.13□□□□□ -0.31
IRF1-204ENST00000439555 ADAM17P78536 824 aa13.13□□□□□ -0.31
IRF1-204ENST00000439555 UBE2SQ16763 222 aa13.13□□□□□ -0.31
IRF1-204ENST00000439555 WWC2Q6AWC2 1192 aa13.13□□□□□ -0.31
IRF1-204ENST00000439555 SPRED2Q7Z698 418 aa13.13□□□□□ -0.31
IRF1-204ENST00000439555 RPAINQ86UA6 219 aa13.13□□□□□ -0.31
IRF1-204ENST00000439555 RAB11FIP4Q86YS3 637 aa13.13□□□□□ -0.31
IRF1-204ENST00000439555 GDPD5Q8WTR4 605 aa13.13□□□□□ -0.31
IRF1-204ENST00000439555 WNT8BQ93098 351 aa13.13□□□□□ -0.31
IRF1-204ENST00000439555 BARHL2Q9NY43 387 aa13.13□□□□□ -0.31
IRF1-204ENST00000439555 C5orf42Q9H799 3197 aa13.12□□□□□ -0.31
IRF1-204ENST00000439555 KLF18A0A0U1RQI7 1052 aa13.12□□□□□ -0.31
IRF1-204ENST00000439555 GOLGA8AA7E2F4 631 aa13.12□□□□□ -0.31
IRF1-204ENST00000439555 GOLGA8BA8MQT2 603 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms