RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 EML1O00423 815 aa23.24■■□□□ 1.31
CHD3-204ENST00000439235 KINO60870 393 aaKnown RBP23.24■■□□□ 1.31
CHD3-204ENST00000439235 FARP2O94887 1054 aaPredicted RBP23.24■■□□□ 1.31
CHD3-204ENST00000439235 ADCYAP1R1P41586 468 aa23.24■■□□□ 1.31
CHD3-204ENST00000439235 CELF3Q5SZQ8 465 aaKnown RBP23.24■■□□□ 1.31
CHD3-204ENST00000439235 DHX37Q8IY37 1157 aaKnown RBP23.24■■□□□ 1.31
CHD3-204ENST00000439235 PXYLP1Q8TE99 480 aa23.24■■□□□ 1.31
CHD3-204ENST00000439235 EIF2AK1Q9BQI3 630 aaKnown RBP23.24■■□□□ 1.31
CHD3-204ENST00000439235 MMTAG2Q9BU76 263 aaKnown RBP23.24■■□□□ 1.31
CHD3-204ENST00000439235 NT5C3AQ9H0P0 336 aa23.24■■□□□ 1.31
CHD3-204ENST00000439235 DISC1Q9NRI5 854 aa23.24■■□□□ 1.31
CHD3-204ENST00000439235 USP25Q9UHP3 1055 aa23.24■■□□□ 1.31
CHD3-204ENST00000439235 FOXN1O15353 648 aa23.23■■□□□ 1.31
CHD3-204ENST00000439235 ADCY3O60266 1144 aa23.23■■□□□ 1.31
CHD3-204ENST00000439235 NR1I2O75469 434 aa23.23■■□□□ 1.31
CHD3-204ENST00000439235 CCNE2O96020 404 aa23.23■■□□□ 1.31
CHD3-204ENST00000439235 GH1P01241 217 aa23.23■■□□□ 1.31
CHD3-204ENST00000439235 ZNF865P0CJ78 1059 aaPredicted RBP23.23■■□□□ 1.31
CHD3-204ENST00000439235 KARSQ15046 597 aaKnown RBP23.23■■□□□ 1.31
CHD3-204ENST00000439235 PDILTQ8N807 584 aa23.23■■□□□ 1.31
CHD3-204ENST00000439235 SYAP1Q96A49 352 aaPredicted RBP23.23■■□□□ 1.31
CHD3-204ENST00000439235 CCDC34Q96HJ3 373 aa23.23■■□□□ 1.31
CHD3-204ENST00000439235 POLR3CQ9BUI4 534 aaPredicted RBP23.23■■□□□ 1.31
CHD3-204ENST00000439235 TUFT1Q9NNX1 390 aa23.23■■□□□ 1.31
CHD3-204ENST00000439235 DACT1Q9NYF0 836 aa23.23■■□□□ 1.31
CHD3-204ENST00000439235 TRIM17Q9Y577 477 aa23.23■■□□□ 1.31
CHD3-204ENST00000439235 MCM3APO60318 1980 aa23.23■■□□□ 1.31
CHD3-204ENST00000439235 DOCK3Q8IZD9 2030 aa23.22■■□□□ 1.31
CHD3-204ENST00000439235 POLR2DO15514 142 aaKnown RBP23.22■■□□□ 1.31
CHD3-204ENST00000439235 ZNF202O95125 648 aa23.22■■□□□ 1.31
CHD3-204ENST00000439235 HMGCRP04035 888 aa23.22■■□□□ 1.31
CHD3-204ENST00000439235 PSAPP07602 524 aa23.22■■□□□ 1.31
CHD3-204ENST00000439235 MUTP22033 750 aa23.22■■□□□ 1.31
CHD3-204ENST00000439235 RPA1P27694 616 aa23.22■■□□□ 1.31
CHD3-204ENST00000439235 STAT6P42226 847 aa23.22■■□□□ 1.31
CHD3-204ENST00000439235 ACTR2P61160 394 aa23.22■■□□□ 1.31
CHD3-204ENST00000439235 SP4Q02446 784 aa23.22■■□□□ 1.31
CHD3-204ENST00000439235 SNW1Q13573 536 aaKnown RBP23.22■■□□□ 1.31
CHD3-204ENST00000439235 ZRSR1Q15695 479 aaKnown RBP23.22■■□□□ 1.31
CHD3-204ENST00000439235 CCDC144BQ3MJ40 725 aa23.22■■□□□ 1.31
CHD3-204ENST00000439235 DUSP28Q4G0W2 176 aa23.22■■□□□ 1.31
CHD3-204ENST00000439235 HYIQ5T013 277 aa23.22■■□□□ 1.31
CHD3-204ENST00000439235 RRAGBQ5VZM2 374 aa23.22■■□□□ 1.31
CHD3-204ENST00000439235 KCTD17Q8N5Z5 321 aa23.22■■□□□ 1.31
CHD3-204ENST00000439235 IQUBQ8NA54 791 aa23.22■■□□□ 1.31
CHD3-204ENST00000439235 SLAIN1Q8ND83 568 aa23.22■■□□□ 1.31
CHD3-204ENST00000439235 FAM184BQ9ULE4 1060 aa23.22■■□□□ 1.31
CHD3-204ENST00000439235 PCDHA10Q9Y5I2 948 aa23.22■■□□□ 1.31
CHD3-204ENST00000439235 SORBS3O60504 671 aa23.21■■□□□ 1.31
CHD3-204ENST00000439235 CYBAP13498 195 aa23.21■■□□□ 1.31
CHD3-204ENST00000439235 TNFAIP2Q03169 654 aa23.21■■□□□ 1.31
CHD3-204ENST00000439235 LAMC2Q13753 1193 aa23.21■■□□□ 1.31
CHD3-204ENST00000439235 TMEM119Q4V9L6 283 aa23.21■■□□□ 1.31
CHD3-204ENST00000439235 PRAMEF19Q5SWL8 479 aa23.21■■□□□ 1.31
CHD3-204ENST00000439235 MIS18BP1Q6P0N0 1132 aa23.21■■□□□ 1.31
CHD3-204ENST00000439235 EMID1Q96A84 441 aaPredicted RBP23.21■■□□□ 1.31
CHD3-204ENST00000439235 DHX58Q96C10 678 aa23.21■■□□□ 1.31
CHD3-204ENST00000439235 TIGD1Q96MW7 591 aa23.21■■□□□ 1.31
CHD3-204ENST00000439235 CUEDC2Q9H467 287 aa23.21■■□□□ 1.31
CHD3-204ENST00000439235 STK17AQ9UEE5 414 aa23.21■■□□□ 1.31
CHD3-204ENST00000439235 A0A087X0B3 334 aa23.2■■□□□ 1.3
CHD3-204ENST00000439235 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.2■■□□□ 1.3
CHD3-204ENST00000439235 NOP56O00567 594 aaKnown RBP23.2■■□□□ 1.3
CHD3-204ENST00000439235 DKC1O60832 514 aaKnown RBP eCLIP23.2■■□□□ 1.3
CHD3-204ENST00000439235 MED24O75448 989 aa23.2■■□□□ 1.3
CHD3-204ENST00000439235 P4HBP07237 508 aaKnown RBP23.2■■□□□ 1.3
CHD3-204ENST00000439235 AKR1A1P14550 325 aa23.2■■□□□ 1.3
CHD3-204ENST00000439235 ELNP15502 786 aa23.2■■□□□ 1.3
CHD3-204ENST00000439235 SMPD1P17405 629 aa23.2■■□□□ 1.3
CHD3-204ENST00000439235 PLCG1P19174 1290 aa23.2■■□□□ 1.3
CHD3-204ENST00000439235 GRB10Q13322 594 aa23.2■■□□□ 1.3
CHD3-204ENST00000439235 CATSPER3Q86XQ3 398 aa23.2■■□□□ 1.3
CHD3-204ENST00000439235 CEP57L1Q8IYX8 460 aa23.2■■□□□ 1.3
CHD3-204ENST00000439235 DYDC2Q96IM9 177 aa23.2■■□□□ 1.3
CHD3-204ENST00000439235 SPATA33Q96N06 139 aa23.2■■□□□ 1.3
CHD3-204ENST00000439235 HSD17B14Q9BPX1 270 aa23.2■■□□□ 1.3
CHD3-204ENST00000439235 PANK2Q9BZ23 570 aa23.2■■□□□ 1.3
CHD3-204ENST00000439235 BCAS3Q9H6U6 928 aa23.2■■□□□ 1.3
CHD3-204ENST00000439235 MAGEF1Q9HAY2 307 aa23.2■■□□□ 1.3
CHD3-204ENST00000439235 PRDM10Q9NQV6 1147 aa23.2■■□□□ 1.3
CHD3-204ENST00000439235 POTEB3A0JP26 581 aa23.19■■□□□ 1.3
CHD3-204ENST00000439235 SLC34A2O95436 690 aa23.19■■□□□ 1.3
CHD3-204ENST00000439235 SUPT20HL2P0C7V6 817 aa23.19■■□□□ 1.3
CHD3-204ENST00000439235 CYP4A11Q02928 519 aa23.19■■□□□ 1.3
CHD3-204ENST00000439235 ARHGAP1Q07960 439 aa23.19■■□□□ 1.3
CHD3-204ENST00000439235 E2F4Q16254 413 aa23.19■■□□□ 1.3
CHD3-204ENST00000439235 POTEBQ6S5H4 581 aa23.19■■□□□ 1.3
CHD3-204ENST00000439235 CNNM3Q8NE01 707 aa23.19■■□□□ 1.3
CHD3-204ENST00000439235 SEPT1Q8WYJ6 367 aa23.19■■□□□ 1.3
CHD3-204ENST00000439235 COPS5Q92905 334 aa23.19■■□□□ 1.3
CHD3-204ENST00000439235 ATP6V0A1Q93050 837 aa23.19■■□□□ 1.3
CHD3-204ENST00000439235 PNMA5Q96PV4 448 aa23.19■■□□□ 1.3
CHD3-204ENST00000439235 ATG7O95352 703 aa23.18■■□□□ 1.3
CHD3-204ENST00000439235 SPATA31C1P0DKV0 1188 aa23.18■■□□□ 1.3
CHD3-204ENST00000439235 HSPA8P11142 646 aaKnown RBP23.18■■□□□ 1.3
CHD3-204ENST00000439235 QARSP47897 775 aaKnown RBP23.18■■□□□ 1.3
CHD3-204ENST00000439235 KANK3Q6NY19 840 aa23.18■■□□□ 1.3
CHD3-204ENST00000439235 CAVIN1Q6NZI2 390 aaKnown RBP23.18■■□□□ 1.3
CHD3-204ENST00000439235 ABHD15Q6UXT9 468 aa23.18■■□□□ 1.3
CHD3-204ENST00000439235 KRBA2Q6ZNG9 492 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms