RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 FAM200BP0CF97 657 aa4.43□□□□□ -1.7
HMGB1P12-201ENST00000438594 TGFB3P10600 412 aa4.43□□□□□ -1.7
HMGB1P12-201ENST00000438594 GEMIN4P57678 1058 aaKnown RBP4.43□□□□□ -1.7
HMGB1P12-201ENST00000438594 GPSM2P81274 684 aa4.43□□□□□ -1.7
HMGB1P12-201ENST00000438594 HTRA3P83110 453 aa4.43□□□□□ -1.7
HMGB1P12-201ENST00000438594 IFRD2Q12894 506 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P12-201ENST00000438594 CNGB1Q14028 1251 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P12-201ENST00000438594 TCEA2Q15560 299 aa4.43□□□□□ -1.7
HMGB1P12-201ENST00000438594 SLC4A8Q2Y0W8 1093 aa4.43□□□□□ -1.7
HMGB1P12-201ENST00000438594 TBC1D10BQ4KMP7 808 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P12-201ENST00000438594 TM4SF20Q53R12 229 aa4.43□□□□□ -1.7
HMGB1P12-201ENST00000438594 C2orf27AQ580R0 203 aa4.43□□□□□ -1.7
HMGB1P12-201ENST00000438594 ZSCAN30Q86W11 494 aa4.43□□□□□ -1.7
HMGB1P12-201ENST00000438594 SMAP1Q8IYB5 467 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P12-201ENST00000438594 JMYQ8N9B5 988 aa4.43□□□□□ -1.7
HMGB1P12-201ENST00000438594 CHAC2Q8WUX2 184 aa4.43□□□□□ -1.7
HMGB1P12-201ENST00000438594 SORCS2Q96PQ0 1159 aa4.43□□□□□ -1.7
HMGB1P12-201ENST00000438594 SLC12A9Q9BXP2 914 aa4.43□□□□□ -1.7
HMGB1P12-201ENST00000438594 ASPSCR1Q9BZE9 553 aa4.43□□□□□ -1.7
HMGB1P12-201ENST00000438594 SCAND2PQ9GZW5 306 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P12-201ENST00000438594 CDH19Q9H159 772 aa4.43□□□□□ -1.7
HMGB1P12-201ENST00000438594 RETREG1Q9H6L5 497 aa4.43□□□□□ -1.7
HMGB1P12-201ENST00000438594 GINM1Q9NU53 330 aa4.43□□□□□ -1.7
HMGB1P12-201ENST00000438594 KBTBD4Q9NVX7 518 aa4.43□□□□□ -1.7
HMGB1P12-201ENST00000438594 CWC25Q9NXE8 425 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P12-201ENST00000438594 NTMQ9P121 344 aa4.43□□□□□ -1.7
HMGB1P12-201ENST00000438594 HDAC9Q9UKV0 1011 aa4.43□□□□□ -1.7
HMGB1P12-201ENST00000438594 STRIP2Q9ULQ0 834 aa4.43□□□□□ -1.7
HMGB1P12-201ENST00000438594 PLAAQ9Y263 795 aa4.43□□□□□ -1.7
HMGB1P12-201ENST00000438594 ZNF536O15090 1300 aa4.43□□□□□ -1.7
HMGB1P12-201ENST00000438594 H0Y8X5 98 aa4.42□□□□□ -1.7
HMGB1P12-201ENST00000438594 CBFA2T2O43439 604 aa4.42□□□□□ -1.7
HMGB1P12-201ENST00000438594 PIP5K1CO60331 668 aa4.42□□□□□ -1.7
HMGB1P12-201ENST00000438594 ASMTLO95671 621 aa4.42□□□□□ -1.7
HMGB1P12-201ENST00000438594 GARTP22102 1010 aa4.42□□□□□ -1.7
HMGB1P12-201ENST00000438594 CCNFP41002 786 aa4.42□□□□□ -1.7
HMGB1P12-201ENST00000438594 HTR3AP46098 478 aa4.42□□□□□ -1.7
HMGB1P12-201ENST00000438594 NEK2P51955 445 aa4.42□□□□□ -1.7
HMGB1P12-201ENST00000438594 DLX2Q07687 328 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P12-201ENST00000438594 SMAD4Q13485 552 aaKnown RBP4.42□□□□□ -1.7
HMGB1P12-201ENST00000438594 RASGRF1Q13972 1273 aa4.42□□□□□ -1.7
HMGB1P12-201ENST00000438594 SEZ6Q53EL9 994 aa4.42□□□□□ -1.7
HMGB1P12-201ENST00000438594 NOL9Q5SY16 702 aaKnown RBP4.42□□□□□ -1.7
HMGB1P12-201ENST00000438594 AXDND1Q5T1B0 1012 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P12-201ENST00000438594 ANO1Q5XXA6 986 aa4.42□□□□□ -1.7
HMGB1P12-201ENST00000438594 NXNQ6DKJ4 435 aa4.42□□□□□ -1.7
HMGB1P12-201ENST00000438594 FBXL19Q6PCT2 694 aa4.42□□□□□ -1.7
HMGB1P12-201ENST00000438594 CYP2R1Q6VVX0 501 aa4.42□□□□□ -1.7
HMGB1P12-201ENST00000438594 B3GNT8Q7Z7M8 397 aa4.42□□□□□ -1.7
HMGB1P12-201ENST00000438594 DGKHQ86XP1 1220 aa4.42□□□□□ -1.7
HMGB1P12-201ENST00000438594 ZFPM1Q8IX07 1006 aa4.42□□□□□ -1.7
HMGB1P12-201ENST00000438594 TCEAL8Q8IYN2 117 aa4.42□□□□□ -1.7
HMGB1P12-201ENST00000438594 CPXCR1Q8N123 301 aa4.42□□□□□ -1.7
HMGB1P12-201ENST00000438594 ANKRD42Q8N9B4 389 aa4.42□□□□□ -1.7
HMGB1P12-201ENST00000438594 SMARCC2Q8TAQ2 1214 aa4.42□□□□□ -1.7
HMGB1P12-201ENST00000438594 ZBTB8AQ96BR9 441 aa4.42□□□□□ -1.7
HMGB1P12-201ENST00000438594 TRMT2BQ96GJ1 504 aaKnown RBP4.42□□□□□ -1.7
HMGB1P12-201ENST00000438594 NOX5Q96PH1 765 aa4.42□□□□□ -1.7
HMGB1P12-201ENST00000438594 SPON2Q9BUD6 331 aa4.42□□□□□ -1.7
HMGB1P12-201ENST00000438594 MRIQ9BWK5 157 aa4.42□□□□□ -1.7
HMGB1P12-201ENST00000438594 RTFDC1Q9BY42 306 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P12-201ENST00000438594 CHMP4BQ9H444 224 aaKnown RBP4.42□□□□□ -1.7
HMGB1P12-201ENST00000438594 MCM8Q9UJA3 840 aa4.42□□□□□ -1.7
HMGB1P12-201ENST00000438594 GTF2A1LQ9UNN4 478 aa4.42□□□□□ -1.7
HMGB1P12-201ENST00000438594 DIS3Q9Y2L1 958 aaKnown RBP4.42□□□□□ -1.7
HMGB1P12-201ENST00000438594 SH3BP1Q9Y3L3 701 aa4.42□□□□□ -1.7
HMGB1P12-201ENST00000438594 SUPT16HQ9Y5B9 1047 aaKnown RBP4.42□□□□□ -1.7
HMGB1P12-201ENST00000438594 A0A087X0B3 334 aa4.41□□□□□ -1.7
HMGB1P12-201ENST00000438594 KLRG2A4D1S0 409 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P12-201ENST00000438594 PDPK1O15530 556 aa4.41□□□□□ -1.7
HMGB1P12-201ENST00000438594 KATNA1O75449 491 aa4.41□□□□□ -1.7
HMGB1P12-201ENST00000438594 ATE1O95260 518 aa4.41□□□□□ -1.7
HMGB1P12-201ENST00000438594 MYCLP1P12525 358 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P12-201ENST00000438594 TRIM27P14373 513 aa4.41□□□□□ -1.7
HMGB1P12-201ENST00000438594 NME1P15531 152 aaKnown RBP4.41□□□□□ -1.7
HMGB1P12-201ENST00000438594 SERPINB3P29508 390 aa4.41□□□□□ -1.7
HMGB1P12-201ENST00000438594 NOP2P46087 812 aaKnown RBP4.41□□□□□ -1.7
HMGB1P12-201ENST00000438594 SOX9P48436 509 aa4.41□□□□□ -1.7
HMGB1P12-201ENST00000438594 GUCY2FP51841 1108 aa4.41□□□□□ -1.7
HMGB1P12-201ENST00000438594 NEK3P51956 506 aa4.41□□□□□ -1.7
HMGB1P12-201ENST00000438594 PURAQ00577 322 aaKnown RBP4.41□□□□□ -1.7
HMGB1P12-201ENST00000438594 CLCQ05315 142 aa4.41□□□□□ -1.7
HMGB1P12-201ENST00000438594 MLC1Q15049 377 aa4.41□□□□□ -1.7
HMGB1P12-201ENST00000438594 TOMM20Q15388 145 aa4.41□□□□□ -1.7
HMGB1P12-201ENST00000438594 CDC37Q16543 378 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P12-201ENST00000438594 C21orf62-AS1Q17RA5 79 aa4.41□□□□□ -1.7
HMGB1P12-201ENST00000438594 HYIQ5T013 277 aa4.41□□□□□ -1.7
HMGB1P12-201ENST00000438594 FAM102BQ5T8I3 360 aa4.41□□□□□ -1.7
HMGB1P12-201ENST00000438594 IL31Q6EBC2 164 aa4.41□□□□□ -1.7
HMGB1P12-201ENST00000438594 CABP7Q86V35 215 aa4.41□□□□□ -1.7
HMGB1P12-201ENST00000438594 ZNF761Q86XN6 746 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P12-201ENST00000438594 KIAA0825Q8IV33 1275 aa4.41□□□□□ -1.7
HMGB1P12-201ENST00000438594 C7orf61Q8IZ16 206 aa4.41□□□□□ -1.7
HMGB1P12-201ENST00000438594 MSL3Q8N5Y2 521 aaKnown RBP4.41□□□□□ -1.7
HMGB1P12-201ENST00000438594 PPHLN1Q8NEY8 458 aaKnown RBP4.41□□□□□ -1.7
HMGB1P12-201ENST00000438594 SH3RF3Q8TEJ3 882 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P12-201ENST00000438594 THAP3Q8WTV1 239 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P12-201ENST00000438594 ATXN2LQ8WWM7 1075 aaKnown RBP4.41□□□□□ -1.7
HMGB1P12-201ENST00000438594 RSPH1Q8WYR4 309 aa4.41□□□□□ -1.7
HMGB1P12-201ENST00000438594 BRF1Q92994 677 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms