RNA–Protein interactions for RNA: ENST00000438497.5

SCRN1-208, Transcript of secernin 1, humanhuman

TSL 4

Gene SCRN1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-208ENST00000438497 FGRP09769 529 aa10.09□□□□□ -0.79
SCRN1-208ENST00000438497 GOLGA8HP0CJ92 632 aa10.09□□□□□ -0.79
SCRN1-208ENST00000438497 HSPD1P10809 573 aaKnown RBP10.09□□□□□ -0.79
SCRN1-208ENST00000438497 FAM26DQ5JW98 314 aa10.09□□□□□ -0.79
SCRN1-208ENST00000438497 ZMYM1Q5SVZ6 1142 aa10.09□□□□□ -0.79
SCRN1-208ENST00000438497 POF1BQ8WVV4 589 aa10.09□□□□□ -0.79
SCRN1-208ENST00000438497 GPATCH3Q96I76 525 aa10.09□□□□□ -0.79
SCRN1-208ENST00000438497 CPVLQ9H3G5 476 aa10.09□□□□□ -0.79
SCRN1-208ENST00000438497 ANAPC4Q9UJX5 808 aa10.09□□□□□ -0.79
SCRN1-208ENST00000438497 DDX19BQ9UMR2 479 aa10.09□□□□□ -0.79
SCRN1-208ENST00000438497 MRPL11Q9Y3B7 192 aaKnown RBP10.09□□□□□ -0.79
SCRN1-208ENST00000438497 FAM186AA6NE01 2351 aa10.09□□□□□ -0.79
SCRN1-208ENST00000438497 KAT6AQ92794 2004 aa10.08□□□□□ -0.8
SCRN1-208ENST00000438497 TULP1O00294 542 aaPredicted RBP10.08□□□□□ -0.8
SCRN1-208ENST00000438497 PER2O15055 1255 aa10.08□□□□□ -0.8
SCRN1-208ENST00000438497 RGS20O76081 388 aa10.08□□□□□ -0.8
SCRN1-208ENST00000438497 CFBP00751 764 aa10.08□□□□□ -0.8
SCRN1-208ENST00000438497 SNHG28P0DPA3 235 aa10.08□□□□□ -0.8
SCRN1-208ENST00000438497 TGFB3P10600 412 aa10.08□□□□□ -0.8
SCRN1-208ENST00000438497 HOXC8P31273 242 aa10.08□□□□□ -0.8
SCRN1-208ENST00000438497 SP2Q02086 613 aa10.08□□□□□ -0.8
SCRN1-208ENST00000438497 GPATCH4Q5T3I0 446 aaKnown RBP10.08□□□□□ -0.8
SCRN1-208ENST00000438497 TSHZ3Q63HK5 1081 aa10.08□□□□□ -0.8
SCRN1-208ENST00000438497 FRMD5Q7Z6J6 570 aa10.08□□□□□ -0.8
SCRN1-208ENST00000438497 KLHL23Q8NBE8 558 aa10.08□□□□□ -0.8
SCRN1-208ENST00000438497 USP26Q9BXU7 913 aa10.08□□□□□ -0.8
SCRN1-208ENST00000438497 CHMP4BQ9H444 224 aaKnown RBP10.08□□□□□ -0.8
SCRN1-208ENST00000438497 RC3H2Q9HBD1 1191 aaKnown RBP10.08□□□□□ -0.8
SCRN1-208ENST00000438497 VAT1LQ9HCJ6 419 aa10.08□□□□□ -0.8
SCRN1-208ENST00000438497 PXMP2Q9NR77 195 aa10.08□□□□□ -0.8
SCRN1-208ENST00000438497 GLP2RO95838 553 aa10.07□□□□□ -0.8
SCRN1-208ENST00000438497 CHRNA1P02708 482 aa10.07□□□□□ -0.8
SCRN1-208ENST00000438497 LGALS2P05162 132 aa10.07□□□□□ -0.8
SCRN1-208ENST00000438497 GHRP10912 638 aa10.07□□□□□ -0.8
SCRN1-208ENST00000438497 DEKP35659 375 aaKnown RBP10.07□□□□□ -0.8
SCRN1-208ENST00000438497 CDC37Q16543 378 aaPredicted RBP10.07□□□□□ -0.8
SCRN1-208ENST00000438497 VSIG10LQ86VR7 867 aa10.07□□□□□ -0.8
SCRN1-208ENST00000438497 ADGRF4Q8IZF3 695 aa10.07□□□□□ -0.8
SCRN1-208ENST00000438497 KREMEN2Q8NCW0 462 aa10.07□□□□□ -0.8
SCRN1-208ENST00000438497 SUSD6Q92537 303 aa10.07□□□□□ -0.8
SCRN1-208ENST00000438497 BCAS3Q9H6U6 928 aa10.07□□□□□ -0.8
SCRN1-208ENST00000438497 EHMT1Q9H9B1 1298 aa10.07□□□□□ -0.8
SCRN1-208ENST00000438497 MRPL42Q9Y6G3 142 aaKnown RBP10.07□□□□□ -0.8
SCRN1-208ENST00000438497 TTC3P53804 2025 aa10.07□□□□□ -0.8
SCRN1-208ENST00000438497 DHX16O60231 1041 aaKnown RBP10.06□□□□□ -0.8
SCRN1-208ENST00000438497 ARHGAP4P98171 946 aa10.06□□□□□ -0.8
SCRN1-208ENST00000438497 RBM10P98175 930 aaKnown RBP10.06□□□□□ -0.8
SCRN1-208ENST00000438497 LPIN1Q14693 890 aa10.06□□□□□ -0.8
SCRN1-208ENST00000438497 ALX1Q15699 326 aa10.06□□□□□ -0.8
SCRN1-208ENST00000438497 UBALD2Q8IYN6 164 aa10.06□□□□□ -0.8
SCRN1-208ENST00000438497 CMTR2Q8IYT2 770 aaKnown RBP10.06□□□□□ -0.8
SCRN1-208ENST00000438497 TMEM105Q8N8V8 129 aa10.06□□□□□ -0.8
SCRN1-208ENST00000438497 ATP8B4Q8TF62 1192 aa10.06□□□□□ -0.8
SCRN1-208ENST00000438497 ZFP91Q96JP5 570 aaPredicted RBP10.06□□□□□ -0.8
SCRN1-208ENST00000438497 NEK1Q96PY6 1258 aa10.06□□□□□ -0.8
SCRN1-208ENST00000438497 PDCD2LQ9BRP1 358 aa10.06□□□□□ -0.8
SCRN1-208ENST00000438497 NOP56O00567 594 aaKnown RBP10.05□□□□□ -0.8
SCRN1-208ENST00000438497 FOXP2O15409 715 aa10.05□□□□□ -0.8
SCRN1-208ENST00000438497 FGAP02671 866 aa10.05□□□□□ -0.8
SCRN1-208ENST00000438497 STAG3L1P0CL83 205 aa10.05□□□□□ -0.8
SCRN1-208ENST00000438497 UBA1P22314 1058 aaKnown RBP10.05□□□□□ -0.8
SCRN1-208ENST00000438497 SP100P23497 879 aaPredicted RBP10.05□□□□□ -0.8
SCRN1-208ENST00000438497 ADAM17P78536 824 aa10.05□□□□□ -0.8
SCRN1-208ENST00000438497 QRICH1Q2TAL8 776 aa10.05□□□□□ -0.8
SCRN1-208ENST00000438497 PAN2Q504Q3 1202 aaKnown RBP10.05□□□□□ -0.8
SCRN1-208ENST00000438497 UTP14CQ5TAP6 766 aaKnown RBP10.05□□□□□ -0.8
SCRN1-208ENST00000438497 VPS53Q5VIR6 699 aa10.05□□□□□ -0.8
SCRN1-208ENST00000438497 MCTP2Q6DN12 878 aa10.05□□□□□ -0.8
SCRN1-208ENST00000438497 ASTLQ6HA08 431 aaPredicted RBP10.05□□□□□ -0.8
SCRN1-208ENST00000438497 STOX1Q6ZVD7 989 aa10.05□□□□□ -0.8
SCRN1-208ENST00000438497 RSPH3Q86UC2 560 aa10.05□□□□□ -0.8
SCRN1-208ENST00000438497 RTN4RL1Q86UN2 441 aaPredicted RBP10.05□□□□□ -0.8
SCRN1-208ENST00000438497 GPKOWQ92917 476 aaPredicted RBP eCLIP10.05□□□□□ -0.8
SCRN1-208ENST00000438497 APOL5Q9BWW9 433 aa10.05□□□□□ -0.8
SCRN1-208ENST00000438497 S1PR5Q9H228 398 aa10.05□□□□□ -0.8
SCRN1-208ENST00000438497 MAP3K20Q9NYL2 800 aaKnown RBP10.05□□□□□ -0.8
SCRN1-208ENST00000438497 SORCS3Q9UPU3 1222 aa10.05□□□□□ -0.8
SCRN1-208ENST00000438497 PCDHB12Q9Y5F1 795 aa10.05□□□□□ -0.8
SCRN1-208ENST00000438497 PCDHGC5Q9Y5F6 944 aa10.05□□□□□ -0.8
SCRN1-208ENST00000438497 MYH6P13533 1939 aa10.05□□□□□ -0.8
SCRN1-208ENST00000438497 MYO15AQ9UKN7 3530 aa10.04□□□□□ -0.8
SCRN1-208ENST00000438497 MED19A0JLT2 244 aaPredicted RBP10.04□□□□□ -0.8
SCRN1-208ENST00000438497 FSD2A1L4K1 749 aa10.04□□□□□ -0.8
SCRN1-208ENST00000438497 KRT37O76014 449 aa10.04□□□□□ -0.8
SCRN1-208ENST00000438497 SRGAP2BP0DMP2 458 aa10.04□□□□□ -0.8
SCRN1-208ENST00000438497 TECP42680 631 aa10.04□□□□□ -0.8
SCRN1-208ENST00000438497 HSD17B4P51659 736 aa10.04□□□□□ -0.8
SCRN1-208ENST00000438497 CLCN5P51795 746 aa10.04□□□□□ -0.8
SCRN1-208ENST00000438497 PGM5Q15124 567 aa10.04□□□□□ -0.8
SCRN1-208ENST00000438497 FBXO47Q5MNV8 452 aa10.04□□□□□ -0.8
SCRN1-208ENST00000438497 SPOUT1Q5T280 376 aaKnown RBP10.04□□□□□ -0.8
SCRN1-208ENST00000438497 MFSD6Q6ZSS7 791 aa10.04□□□□□ -0.8
SCRN1-208ENST00000438497 CYFIP1Q7L576 1253 aa10.04□□□□□ -0.8
SCRN1-208ENST00000438497 DGLUCYQ7Z3D6 616 aa10.04□□□□□ -0.8
SCRN1-208ENST00000438497 DGKHQ86XP1 1220 aa10.04□□□□□ -0.8
SCRN1-208ENST00000438497 KCNG4Q8TDN1 519 aa10.04□□□□□ -0.8
SCRN1-208ENST00000438497 LMBR1Q8WVP7 490 aa10.04□□□□□ -0.8
SCRN1-208ENST00000438497 CDCA3Q99618 268 aaPredicted RBP10.04□□□□□ -0.8
SCRN1-208ENST00000438497 ZKSCAN3Q9BRR0 538 aa10.04□□□□□ -0.8
SCRN1-208ENST00000438497 MFSD1Q9H3U5 465 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms