RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 KRT12Q99456 494 aa18.41■□□□□ 0.54
TTC3-209ENST00000438055 PSD3Q9NYI0 1048 aa18.41■□□□□ 0.54
TTC3-209ENST00000438055 STIM2Q9P246 746 aa18.41■□□□□ 0.54
TTC3-209ENST00000438055 CCDC88AQ3V6T2 1871 aa18.41■□□□□ 0.54
TTC3-209ENST00000438055 GNA14O95837 355 aa18.41■□□□□ 0.54
TTC3-209ENST00000438055 ADRA2BP18089 450 aa18.41■□□□□ 0.54
TTC3-209ENST00000438055 KLRC1P26715 233 aa18.41■□□□□ 0.54
TTC3-209ENST00000438055 CRY2Q49AN0 593 aa18.41■□□□□ 0.54
TTC3-209ENST00000438055 KCTD16Q68DU8 428 aa18.41■□□□□ 0.54
TTC3-209ENST00000438055 PPP1R18Q6NYC8 613 aa18.41■□□□□ 0.54
TTC3-209ENST00000438055 NUCKS1Q9H1E3 243 aaKnown RBP18.41■□□□□ 0.54
TTC3-209ENST00000438055 EPB41L5Q9HCM4 733 aa18.41■□□□□ 0.54
TTC3-209ENST00000438055 HDAC9Q9UKV0 1011 aa18.41■□□□□ 0.54
TTC3-209ENST00000438055 TRIM66O15016 1216 aa18.4■□□□□ 0.54
TTC3-209ENST00000438055 CYP11B2P19099 503 aa18.4■□□□□ 0.54
TTC3-209ENST00000438055 GABPAQ06546 454 aa18.4■□□□□ 0.54
TTC3-209ENST00000438055 SLC30A10Q6XR72 485 aa18.4■□□□□ 0.54
TTC3-209ENST00000438055 NAP1L4Q99733 375 aaKnown RBP18.4■□□□□ 0.54
TTC3-209ENST00000438055 PACSIN1Q9BY11 444 aa18.4■□□□□ 0.54
TTC3-209ENST00000438055 BHMT2Q9H2M3 363 aa18.4■□□□□ 0.54
TTC3-209ENST00000438055 KCNQ5Q9NR82 932 aa18.4■□□□□ 0.54
TTC3-209ENST00000438055 ATP6V0A2Q9Y487 856 aa18.4■□□□□ 0.54
TTC3-209ENST00000438055 KCNK3O14649 394 aa18.4■□□□□ 0.54
TTC3-209ENST00000438055 CRKP46108 304 aa18.4■□□□□ 0.54
TTC3-209ENST00000438055 UBXN2AP68543 259 aa18.4■□□□□ 0.54
TTC3-209ENST00000438055 SCFD1Q8WVM8 642 aa18.4■□□□□ 0.54
TTC3-209ENST00000438055 RRP15Q9Y3B9 282 aaKnown RBP18.4■□□□□ 0.54
TTC3-209ENST00000438055 A0A087X0T9 212 aa18.4■□□□□ 0.54
TTC3-209ENST00000438055 HEXIM1O94992 359 aaKnown RBP18.4■□□□□ 0.54
TTC3-209ENST00000438055 FAM228BP0C875 321 aa18.4■□□□□ 0.54
TTC3-209ENST00000438055 XRCC5P13010 732 aaKnown RBP18.4■□□□□ 0.54
TTC3-209ENST00000438055 PSMC6P62333 389 aa18.4■□□□□ 0.54
TTC3-209ENST00000438055 MSL1Q68DK7 614 aa18.4■□□□□ 0.54
TTC3-209ENST00000438055 FBXO11Q86XK2 927 aa18.4■□□□□ 0.54
TTC3-209ENST00000438055 DHX36Q9H2U1 1008 aaKnown RBP18.4■□□□□ 0.54
TTC3-209ENST00000438055 VIPAS39Q9H9C1 493 aa18.4■□□□□ 0.54
TTC3-209ENST00000438055 SYF2O95926 243 aaKnown RBP18.39■□□□□ 0.53
TTC3-209ENST00000438055 PLS1Q14651 629 aa18.39■□□□□ 0.53
TTC3-209ENST00000438055 SP8Q8IXZ3 490 aa18.39■□□□□ 0.53
TTC3-209ENST00000438055 CCDC17Q96LX7 622 aa18.39■□□□□ 0.53
TTC3-209ENST00000438055 AMNQ9BXJ7 453 aa18.39■□□□□ 0.53
TTC3-209ENST00000438055 TLR10Q9BXR5 811 aa18.39■□□□□ 0.53
TTC3-209ENST00000438055 NFU1Q9UMS0 254 aa18.39■□□□□ 0.53
TTC3-209ENST00000438055 EDIL3O43854 480 aa18.39■□□□□ 0.53
TTC3-209ENST00000438055 CEP104O60308 925 aa18.39■□□□□ 0.53
TTC3-209ENST00000438055 CFBP00751 764 aa18.39■□□□□ 0.53
TTC3-209ENST00000438055 SLC9A1P19634 815 aa18.39■□□□□ 0.53
TTC3-209ENST00000438055 HNRNPH3P31942 346 aaKnown RBP18.39■□□□□ 0.53
TTC3-209ENST00000438055 EXOC3L4Q17RC7 722 aa18.39■□□□□ 0.53
TTC3-209ENST00000438055 ZNF662Q6ZS27 426 aa18.39■□□□□ 0.53
TTC3-209ENST00000438055 SLFN12Q8IYM2 578 aa18.39■□□□□ 0.53
TTC3-209ENST00000438055 GJD4Q96KN9 370 aaPredicted RBP18.39■□□□□ 0.53
TTC3-209ENST00000438055 PURBQ96QR8 312 aaKnown RBP18.39■□□□□ 0.53
TTC3-209ENST00000438055 MYO1CO00159 1063 aa18.38■□□□□ 0.53
TTC3-209ENST00000438055 KCTD19Q17RG1 926 aaPredicted RBP18.38■□□□□ 0.53
TTC3-209ENST00000438055 MAATS1Q7Z4T9 603 aa18.38■□□□□ 0.53
TTC3-209ENST00000438055 TPH2Q8IWU9 490 aa18.38■□□□□ 0.53
TTC3-209ENST00000438055 CERKQ8TCT0 537 aa18.38■□□□□ 0.53
TTC3-209ENST00000438055 PIGOQ8TEQ8 1089 aa18.38■□□□□ 0.53
TTC3-209ENST00000438055 CEP63Q96MT8 703 aa18.38■□□□□ 0.53
TTC3-209ENST00000438055 CRAMP1Q96RY5 1269 aa18.38■□□□□ 0.53
TTC3-209ENST00000438055 LCMT1Q9UIC8 334 aa18.38■□□□□ 0.53
TTC3-209ENST00000438055 SSU72P8A0A1W2PR75 194 aa18.38■□□□□ 0.53
TTC3-209ENST00000438055 ZSCAN5CA6NGD5 496 aaPredicted RBP18.38■□□□□ 0.53
TTC3-209ENST00000438055 SNHG28P0DPA3 235 aa18.38■□□□□ 0.53
TTC3-209ENST00000438055 MUM1L1Q5H9M0 696 aa18.38■□□□□ 0.53
TTC3-209ENST00000438055 CFAP58Q5T655 872 aa18.38■□□□□ 0.53
TTC3-209ENST00000438055 IFT20Q8IY31 132 aa18.38■□□□□ 0.53
TTC3-209ENST00000438055 GLT8D2Q9H1C3 349 aa18.38■□□□□ 0.53
TTC3-209ENST00000438055 PODXL2Q9NZ53 605 aa18.38■□□□□ 0.53
TTC3-209ENST00000438055 OPA1O60313 960 aa18.38■□□□□ 0.53
TTC3-209ENST00000438055 ZYXQ15942 572 aaKnown RBP18.38■□□□□ 0.53
TTC3-209ENST00000438055 CATSPER3Q86XQ3 398 aa18.38■□□□□ 0.53
TTC3-209ENST00000438055 MMGT1Q8N4V1 131 aa18.38■□□□□ 0.53
TTC3-209ENST00000438055 MYH10P35580 1976 aa18.38■□□□□ 0.53
TTC3-209ENST00000438055 F5H6K3 240 aa18.37■□□□□ 0.53
TTC3-209ENST00000438055 FAM13AO94988 1023 aa18.37■□□□□ 0.53
TTC3-209ENST00000438055 ATP1A2P50993 1020 aa18.37■□□□□ 0.53
TTC3-209ENST00000438055 CASP5P51878 434 aa18.37■□□□□ 0.53
TTC3-209ENST00000438055 EPHB4P54760 987 aa18.37■□□□□ 0.53
TTC3-209ENST00000438055 KLRC3Q07444 240 aa18.37■□□□□ 0.53
TTC3-209ENST00000438055 RPS6KA1Q15418 735 aa18.37■□□□□ 0.53
TTC3-209ENST00000438055 KLHDC7AQ5VTJ3 777 aa18.37■□□□□ 0.53
TTC3-209ENST00000438055 VPS36Q86VN1 386 aa18.37■□□□□ 0.53
TTC3-209ENST00000438055 RGL1Q9NZL6 768 aa18.37■□□□□ 0.53
TTC3-209ENST00000438055 AHDC1Q5TGY3 1603 aaPredicted RBP18.37■□□□□ 0.53
TTC3-209ENST00000438055 LAMB2P55268 1798 aa18.37■□□□□ 0.53
TTC3-209ENST00000438055 ZEB2O60315 1214 aa18.37■□□□□ 0.53
TTC3-209ENST00000438055 TLR2O60603 784 aa18.37■□□□□ 0.53
TTC3-209ENST00000438055 PRPF4BQ13523 1007 aaKnown RBP18.37■□□□□ 0.53
TTC3-209ENST00000438055 COBLL1Q53SF7 1204 aa18.37■□□□□ 0.53
TTC3-209ENST00000438055 REEP2Q9BRK0 252 aa18.37■□□□□ 0.53
TTC3-209ENST00000438055 PKD2L1Q9P0L9 805 aa18.37■□□□□ 0.53
TTC3-209ENST00000438055 TSKSQ9UJT2 592 aa18.37■□□□□ 0.53
TTC3-209ENST00000438055 DDTLA6NHG4 134 aaPredicted RBP18.37■□□□□ 0.53
TTC3-209ENST00000438055 RSPH10B2B2RC85 870 aa18.37■□□□□ 0.53
TTC3-209ENST00000438055 RSPH10BP0C881 870 aa18.37■□□□□ 0.53
TTC3-209ENST00000438055 EPB41P11171 864 aaKnown RBP18.37■□□□□ 0.53
TTC3-209ENST00000438055 MYCT1Q8N699 235 aa18.37■□□□□ 0.53
TTC3-209ENST00000438055 PROCA1Q8NCQ7 364 aaPredicted RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms