RNA–Protein interactions for RNA: ENST00000437425.6

SGCE-205, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-205ENST00000437425 UBXN2AP68543 259 aa17.09■□□□□ 0.33
SGCE-205ENST00000437425 BAATQ14032 418 aaPredicted RBP17.09■□□□□ 0.33
SGCE-205ENST00000437425 FASTKD5Q7L8L6 764 aaKnown RBP17.09■□□□□ 0.33
SGCE-205ENST00000437425 TAAR1Q96RJ0 339 aa17.09■□□□□ 0.33
SGCE-205ENST00000437425 IWS1Q96ST2 819 aa17.09■□□□□ 0.33
SGCE-205ENST00000437425 AGO4Q9HCK5 861 aaKnown RBP17.09■□□□□ 0.33
SGCE-205ENST00000437425 SLC39A2Q9NP94 309 aa17.09■□□□□ 0.33
SGCE-205ENST00000437425 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.09■□□□□ 0.33
SGCE-205ENST00000437425 PFASO15067 1338 aa17.09■□□□□ 0.33
SGCE-205ENST00000437425 EML1O00423 815 aa17.08■□□□□ 0.32
SGCE-205ENST00000437425 N4BP3O15049 544 aa17.08■□□□□ 0.32
SGCE-205ENST00000437425 SLITRK3O94933 977 aa17.08■□□□□ 0.32
SGCE-205ENST00000437425 FCER1AP12319 257 aa17.08■□□□□ 0.32
SGCE-205ENST00000437425 SKILP12757 684 aa17.08■□□□□ 0.32
SGCE-205ENST00000437425 SFNP31947 248 aa17.08■□□□□ 0.32
SGCE-205ENST00000437425 COPB1P53618 953 aaKnown RBP17.08■□□□□ 0.32
SGCE-205ENST00000437425 TBX2Q13207 712 aaPredicted RBP17.08■□□□□ 0.32
SGCE-205ENST00000437425 TTLL12Q14166 644 aaPredicted RBP17.08■□□□□ 0.32
SGCE-205ENST00000437425 KRT31Q15323 416 aa17.08■□□□□ 0.32
SGCE-205ENST00000437425 SLC30A10Q6XR72 485 aa17.08■□□□□ 0.32
SGCE-205ENST00000437425 PPP4R3CPQ6ZMV5 832 aa17.08■□□□□ 0.32
SGCE-205ENST00000437425 VSIG10LQ86VR7 867 aa17.08■□□□□ 0.32
SGCE-205ENST00000437425 DNERQ8NFT8 737 aa17.08■□□□□ 0.32
SGCE-205ENST00000437425 SRRTQ9BXP5 876 aaKnown RBP17.08■□□□□ 0.32
SGCE-205ENST00000437425 UNC45AQ9H3U1 944 aa17.08■□□□□ 0.32
SGCE-205ENST00000437425 KCND1Q9NSA2 647 aa17.08■□□□□ 0.32
SGCE-205ENST00000437425 INTS13Q9NVM9 706 aa17.08■□□□□ 0.32
SGCE-205ENST00000437425 COL4A3BPQ9Y5P4 624 aa17.08■□□□□ 0.32
SGCE-205ENST00000437425 LOC285556D6RIA3 1793 aa17.08■□□□□ 0.32
SGCE-205ENST00000437425 IRF6O14896 467 aa17.07■□□□□ 0.32
SGCE-205ENST00000437425 CCP110O43303 1012 aa17.07■□□□□ 0.32
SGCE-205ENST00000437425 P4HBP07237 508 aaKnown RBP17.07■□□□□ 0.32
SGCE-205ENST00000437425 EIF2AK2P19525 551 aaKnown RBP17.07■□□□□ 0.32
SGCE-205ENST00000437425 JAK3P52333 1124 aa17.07■□□□□ 0.32
SGCE-205ENST00000437425 IRX3P78415 501 aaPredicted RBP17.07■□□□□ 0.32
SGCE-205ENST00000437425 MRPS9P82933 396 aaKnown RBP17.07■□□□□ 0.32
SGCE-205ENST00000437425 KRT76Q01546 638 aa17.07■□□□□ 0.32
SGCE-205ENST00000437425 HERC4Q5GLZ8 1057 aaPredicted RBP17.07■□□□□ 0.32
SGCE-205ENST00000437425 MIER3Q7Z3K6 550 aa17.07■□□□□ 0.32
SGCE-205ENST00000437425 PPFIBP1Q86W92 1011 aa17.07■□□□□ 0.32
SGCE-205ENST00000437425 RIOX2Q8IUF8 465 aa17.07■□□□□ 0.32
SGCE-205ENST00000437425 ZSWIM4Q9H7M6 989 aa17.07■□□□□ 0.32
SGCE-205ENST00000437425 ELP3Q9H9T3 547 aa17.07■□□□□ 0.32
SGCE-205ENST00000437425 CYP39A1Q9NYL5 469 aa17.07■□□□□ 0.32
SGCE-205ENST00000437425 SEL1LQ9UBV2 794 aa17.07■□□□□ 0.32
SGCE-205ENST00000437425 RIPK3Q9Y572 518 aa17.07■□□□□ 0.32
SGCE-205ENST00000437425 LOXHD1Q8IVV2 1947 aa17.07■□□□□ 0.32
SGCE-205ENST00000437425 OTOFQ9HC10 1997 aa17.07■□□□□ 0.32
SGCE-205ENST00000437425 B4DLN1 442 aa17.06■□□□□ 0.32
SGCE-205ENST00000437425 DKC1O60832 514 aaKnown RBP eCLIP17.06■□□□□ 0.32
SGCE-205ENST00000437425 TBCAO75347 108 aaKnown RBP17.06■□□□□ 0.32
SGCE-205ENST00000437425 OFD1O75665 1012 aa17.06■□□□□ 0.32
SGCE-205ENST00000437425 LYPLA2O95372 231 aa17.06■□□□□ 0.32
SGCE-205ENST00000437425 PBX1P40424 430 aa17.06■□□□□ 0.32
SGCE-205ENST00000437425 LRMPQ12912 555 aa17.06■□□□□ 0.32
SGCE-205ENST00000437425 GNPTABQ3T906 1256 aa17.06■□□□□ 0.32
SGCE-205ENST00000437425 HSP90AA4PQ58FG1 418 aa17.06■□□□□ 0.32
SGCE-205ENST00000437425 ANKRD40Q6AI12 368 aa17.06■□□□□ 0.32
SGCE-205ENST00000437425 TPH2Q8IWU9 490 aa17.06■□□□□ 0.32
SGCE-205ENST00000437425 GTF3C2Q8WUA4 911 aaPredicted RBP17.06■□□□□ 0.32
SGCE-205ENST00000437425 IQCDQ96DY2 449 aa17.06■□□□□ 0.32
SGCE-205ENST00000437425 CCDC51Q96ER9 411 aa17.06■□□□□ 0.32
SGCE-205ENST00000437425 DYDC2Q96IM9 177 aa17.06■□□□□ 0.32
SGCE-205ENST00000437425 WNK4Q96J92 1243 aa17.06■□□□□ 0.32
SGCE-205ENST00000437425 DUSP9Q99956 384 aaKnown RBP17.06■□□□□ 0.32
SGCE-205ENST00000437425 BHMT2Q9H2M3 363 aa17.06■□□□□ 0.32
SGCE-205ENST00000437425 PYCARDQ9ULZ3 195 aa17.06■□□□□ 0.32
SGCE-205ENST00000437425 AGTPBP1Q9UPW5 1226 aa17.06■□□□□ 0.32
SGCE-205ENST00000437425 A0A1W2PQC6 194 aa17.06■□□□□ 0.32
SGCE-205ENST00000437425 CHMP2AO43633 222 aa17.06■□□□□ 0.32
SGCE-205ENST00000437425 GNA14O95837 355 aa17.06■□□□□ 0.32
SGCE-205ENST00000437425 SLC25A27O95847 323 aa17.06■□□□□ 0.32
SGCE-205ENST00000437425 NR3C2P08235 984 aa17.06■□□□□ 0.32
SGCE-205ENST00000437425 PTPRFP10586 1907 aa17.06■□□□□ 0.32
SGCE-205ENST00000437425 OSBPP22059 807 aa17.06■□□□□ 0.32
SGCE-205ENST00000437425 DNM2P50570 870 aa17.06■□□□□ 0.32
SGCE-205ENST00000437425 CCZ1BP86790 482 aa17.06■□□□□ 0.32
SGCE-205ENST00000437425 CCZ1P86791 482 aaPredicted RBP17.06■□□□□ 0.32
SGCE-205ENST00000437425 CYP4A11Q02928 519 aa17.06■□□□□ 0.32
SGCE-205ENST00000437425 GIT2Q14161 759 aa17.06■□□□□ 0.32
SGCE-205ENST00000437425 PLS1Q14651 629 aa17.06■□□□□ 0.32
SGCE-205ENST00000437425 ARSHQ5FYA8 562 aa17.06■□□□□ 0.32
SGCE-205ENST00000437425 ARMCX5Q6P1M9 558 aa17.06■□□□□ 0.32
SGCE-205ENST00000437425 GADL1Q6ZQY3 521 aa17.06■□□□□ 0.32
SGCE-205ENST00000437425 IL31RAQ8NI17 732 aa17.06■□□□□ 0.32
SGCE-205ENST00000437425 OTUD5Q96G74 571 aa17.06■□□□□ 0.32
SGCE-205ENST00000437425 TIPINQ9BVW5 301 aa17.06■□□□□ 0.32
SGCE-205ENST00000437425 RGL1Q9NZL6 768 aa17.06■□□□□ 0.32
SGCE-205ENST00000437425 ODF2LQ9ULJ1 636 aa17.06■□□□□ 0.32
SGCE-205ENST00000437425 COL11A1P12107 1806 aaPredicted RBP17.05■□□□□ 0.32
SGCE-205ENST00000437425 A0A0G2JMZ2 1700 aa17.05■□□□□ 0.32
SGCE-205ENST00000437425 TRIM49BA6NDI0 452 aa17.05■□□□□ 0.32
SGCE-205ENST00000437425 LGALS16A8MUM7 142 aa17.05■□□□□ 0.32
SGCE-205ENST00000437425 WDR64B1ANS9 1081 aa17.05■□□□□ 0.32
SGCE-205ENST00000437425 DHX15O43143 795 aaKnown RBP17.05■□□□□ 0.32
SGCE-205ENST00000437425 MYCLP12524 364 aaPredicted RBP17.05■□□□□ 0.32
SGCE-205ENST00000437425 PRKCSHP14314 528 aaPredicted RBP17.05■□□□□ 0.32
SGCE-205ENST00000437425 PMS1P54277 932 aaKnown RBP17.05■□□□□ 0.32
SGCE-205ENST00000437425 PSMC6P62333 389 aa17.05■□□□□ 0.32
SGCE-205ENST00000437425 FKBP1BP68106 108 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms