RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 FZD1Q9UP38 647 aa28.51■■■□□ 2.15
CPNE1-216ENST00000437340 LUC7L2Q9Y383 392 aaKnown RBP28.51■■■□□ 2.15
CPNE1-216ENST00000437340 ZBED4O75132 1171 aa28.5■■■□□ 2.15
CPNE1-216ENST00000437340 FKBP3Q00688 224 aaKnown RBP28.5■■■□□ 2.15
CPNE1-216ENST00000437340 RAD9BQ6WBX8 426 aa28.5■■■□□ 2.15
CPNE1-216ENST00000437340 SYT10Q6XYQ8 523 aa28.5■■■□□ 2.15
CPNE1-216ENST00000437340 OR8K1Q8NGG5 319 aa28.5■■■□□ 2.15
CPNE1-216ENST00000437340 RIT2Q99578 217 aa28.5■■■□□ 2.15
CPNE1-216ENST00000437340 ZNF577Q9BSK1 485 aa28.5■■■□□ 2.15
CPNE1-216ENST00000437340 TAF1DQ9H5J8 278 aaPredicted RBP28.5■■■□□ 2.15
CPNE1-216ENST00000437340 RPAP3Q9H6T3 665 aaPredicted RBP28.5■■■□□ 2.15
CPNE1-216ENST00000437340 PICK1Q9NRD5 415 aa28.5■■■□□ 2.15
CPNE1-216ENST00000437340 NPHP3-ACAD11A0A0J9YXS1 232 aa28.5■■■□□ 2.15
CPNE1-216ENST00000437340 RNF225M0QZC1 329 aaPredicted RBP28.5■■■□□ 2.15
CPNE1-216ENST00000437340 NFIBO00712 420 aa28.5■■■□□ 2.15
CPNE1-216ENST00000437340 UBXN2AP68543 259 aa28.5■■■□□ 2.15
CPNE1-216ENST00000437340 CYP4A11Q02928 519 aa28.5■■■□□ 2.15
CPNE1-216ENST00000437340 SPP2Q13103 211 aa28.5■■■□□ 2.15
CPNE1-216ENST00000437340 MAN2A1Q16706 1144 aa28.5■■■□□ 2.15
CPNE1-216ENST00000437340 FIGNQ5HY92 759 aa28.5■■■□□ 2.15
CPNE1-216ENST00000437340 ZNF280CQ8ND82 737 aa28.5■■■□□ 2.15
CPNE1-216ENST00000437340 EEF2KMTQ96G04 330 aa28.5■■■□□ 2.15
CPNE1-216ENST00000437340 CEP63Q96MT8 703 aa28.5■■■□□ 2.15
CPNE1-216ENST00000437340 DNAJC7Q99615 494 aa28.5■■■□□ 2.15
CPNE1-216ENST00000437340 ADGRG1Q9Y653 693 aa28.5■■■□□ 2.15
CPNE1-216ENST00000437340 TTC26A0AVF1 554 aa28.49■■■□□ 2.15
CPNE1-216ENST00000437340 PTPRAP18433 802 aa28.49■■■□□ 2.15
CPNE1-216ENST00000437340 VWA3BQ502W6 1294 aa28.49■■■□□ 2.15
CPNE1-216ENST00000437340 B3GNT9Q6UX72 402 aa28.49■■■□□ 2.15
CPNE1-216ENST00000437340 PPP4R3CPQ6ZMV5 832 aa28.49■■■□□ 2.15
CPNE1-216ENST00000437340 SULF1Q8IWU6 871 aa28.49■■■□□ 2.15
CPNE1-216ENST00000437340 C12orf42Q96LP6 360 aa28.49■■■□□ 2.15
CPNE1-216ENST00000437340 WRNIP1Q96S55 665 aa28.49■■■□□ 2.15
CPNE1-216ENST00000437340 RAVER2Q9HCJ3 691 aaKnown RBP28.49■■■□□ 2.15
CPNE1-216ENST00000437340 PAPPA2Q9BXP8 1791 aa28.49■■■□□ 2.15
CPNE1-216ENST00000437340 OTOFQ9HC10 1997 aa28.48■■■□□ 2.15
CPNE1-216ENST00000437340 IQCA1LA6NCM1 817 aa28.48■■■□□ 2.15
CPNE1-216ENST00000437340 ALAS1P13196 640 aa28.48■■■□□ 2.15
CPNE1-216ENST00000437340 MTF1Q14872 753 aa28.48■■■□□ 2.15
CPNE1-216ENST00000437340 TEKT3Q9BXF9 490 aa28.48■■■□□ 2.15
CPNE1-216ENST00000437340 TTYH3Q9C0H2 523 aa28.48■■■□□ 2.15
CPNE1-216ENST00000437340 RGL1Q9NZL6 768 aa28.48■■■□□ 2.15
CPNE1-216ENST00000437340 CTDP1Q9Y5B0 961 aaPredicted RBP28.48■■■□□ 2.15
CPNE1-216ENST00000437340 FRMPD4Q14CM0 1322 aa28.48■■■□□ 2.15
CPNE1-216ENST00000437340 SLITRK3O94933 977 aa28.47■■■□□ 2.15
CPNE1-216ENST00000437340 GNA14O95837 355 aa28.47■■■□□ 2.15
CPNE1-216ENST00000437340 ARP10275 920 aa28.47■■■□□ 2.15
CPNE1-216ENST00000437340 SYCP1Q15431 976 aa28.47■■■□□ 2.15
CPNE1-216ENST00000437340 CPXCR1Q8N123 301 aa28.47■■■□□ 2.15
CPNE1-216ENST00000437340 SCFD1Q8WVM8 642 aa28.47■■■□□ 2.15
CPNE1-216ENST00000437340 REEP2Q9BRK0 252 aa28.47■■■□□ 2.15
CPNE1-216ENST00000437340 BHMT2Q9H2M3 363 aa28.47■■■□□ 2.15
CPNE1-216ENST00000437340 COL20A1Q9P218 1284 aa28.47■■■□□ 2.15
CPNE1-216ENST00000437340 PHIPQ8WWQ0 1821 aa28.47■■■□□ 2.15
CPNE1-216ENST00000437340 CACNB1Q02641 598 aaPredicted RBP28.47■■■□□ 2.15
CPNE1-216ENST00000437340 EPHA7Q15375 998 aa28.47■■■□□ 2.15
CPNE1-216ENST00000437340 SUPT20HL1Q3ZLR7 823 aa28.47■■■□□ 2.15
CPNE1-216ENST00000437340 EAPPQ56P03 285 aaPredicted RBP28.47■■■□□ 2.15
CPNE1-216ENST00000437340 PCNX4Q63HM2 1172 aa28.47■■■□□ 2.15
CPNE1-216ENST00000437340 ZC3H15Q8WU90 426 aaKnown RBP28.47■■■□□ 2.15
CPNE1-216ENST00000437340 NDST4Q9H3R1 872 aa28.47■■■□□ 2.15
CPNE1-216ENST00000437340 L2HGDHQ9H9P8 463 aa28.47■■■□□ 2.15
CPNE1-216ENST00000437340 A0A1W2PQJ5 194 aa28.46■■■□□ 2.15
CPNE1-216ENST00000437340 IPO5O00410 1097 aaKnown RBP28.46■■■□□ 2.15
CPNE1-216ENST00000437340 ERVK-24P63145 666 aa28.46■■■□□ 2.15
CPNE1-216ENST00000437340 DGKZQ13574 1117 aa28.46■■■□□ 2.15
CPNE1-216ENST00000437340 TSR1Q2NL82 804 aaKnown RBP28.46■■■□□ 2.15
CPNE1-216ENST00000437340 ZC3H3Q8IXZ2 948 aaKnown RBP28.46■■■□□ 2.15
CPNE1-216ENST00000437340 DYDC2Q96IM9 177 aa28.46■■■□□ 2.15
CPNE1-216ENST00000437340 DESI2Q9BSY9 194 aa28.46■■■□□ 2.15
CPNE1-216ENST00000437340 KCTD10Q9H3F6 313 aa28.46■■■□□ 2.15
CPNE1-216ENST00000437340 TBC1D7Q9P0N9 293 aa28.46■■■□□ 2.15
CPNE1-216ENST00000437340 COL4A3BPQ9Y5P4 624 aa28.46■■■□□ 2.15
CPNE1-216ENST00000437340 C19orf81C9J6K1 198 aa28.45■■■□□ 2.15
CPNE1-216ENST00000437340 TRIM21P19474 475 aaKnown RBP28.45■■■□□ 2.15
CPNE1-216ENST00000437340 RAD51AP2Q09MP3 1159 aa28.45■■■□□ 2.15
CPNE1-216ENST00000437340 EDRF1Q3B7T1 1238 aa28.45■■■□□ 2.15
CPNE1-216ENST00000437340 NEK9Q8TD19 979 aa28.45■■■□□ 2.15
CPNE1-216ENST00000437340 SYTL5Q8TDW5 730 aaPredicted RBP28.45■■■□□ 2.15
CPNE1-216ENST00000437340 FGFBP2Q9BYJ0 223 aa28.45■■■□□ 2.15
CPNE1-216ENST00000437340 TRAF5O00463 557 aa28.45■■■□□ 2.14
CPNE1-216ENST00000437340 VWA5AO00534 786 aa28.45■■■□□ 2.14
CPNE1-216ENST00000437340 ITGB5P18084 799 aa28.45■■■□□ 2.14
CPNE1-216ENST00000437340 MARSP56192 900 aaKnown RBP28.45■■■□□ 2.14
CPNE1-216ENST00000437340 CTTNQ14247 550 aaKnown RBP28.45■■■□□ 2.14
CPNE1-216ENST00000437340 TPH2Q8IWU9 490 aa28.45■■■□□ 2.14
CPNE1-216ENST00000437340 ZKSCAN4Q969J2 545 aaPredicted RBP28.45■■■□□ 2.14
CPNE1-216ENST00000437340 KLRG1Q96E93 195 aa28.45■■■□□ 2.14
CPNE1-216ENST00000437340 UNC45AQ9H3U1 944 aa28.45■■■□□ 2.14
CPNE1-216ENST00000437340 DNAI1Q9UI46 699 aa28.45■■■□□ 2.14
CPNE1-216ENST00000437340 GAP43P17677 238 aa28.44■■■□□ 2.14
CPNE1-216ENST00000437340 MUM1L1Q5H9M0 696 aa28.44■■■□□ 2.14
CPNE1-216ENST00000437340 RINT1Q6NUQ1 792 aa28.44■■■□□ 2.14
CPNE1-216ENST00000437340 EPM2AIP1Q7L775 607 aaPredicted RBP28.44■■■□□ 2.14
CPNE1-216ENST00000437340 NACC1Q96RE7 527 aa28.44■■■□□ 2.14
CPNE1-216ENST00000437340 ZHX3Q9H4I2 956 aa28.44■■■□□ 2.14
CPNE1-216ENST00000437340 KCND2Q9NZV8 630 aa28.44■■■□□ 2.14
CPNE1-216ENST00000437340 UBIAD1Q9Y5Z9 338 aa28.44■■■□□ 2.14
CPNE1-216ENST00000437340 CHMP2AO43633 222 aa28.43■■■□□ 2.14
CPNE1-216ENST00000437340 TBCAO75347 108 aaKnown RBP28.43■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms