RNA–Protein interactions for RNA: ENST00000435201.5

LIMK1-203, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-203ENST00000435201 RAD51AP2Q09MP3 1159 aa18.48■□□□□ 0.55
LIMK1-203ENST00000435201 SPA17Q15506 151 aa18.48■□□□□ 0.55
LIMK1-203ENST00000435201 TMCO3Q6UWJ1 677 aa18.48■□□□□ 0.55
LIMK1-203ENST00000435201 MIGA2Q7L4E1 593 aa18.48■□□□□ 0.55
LIMK1-203ENST00000435201 REEP2Q9BRK0 252 aa18.48■□□□□ 0.55
LIMK1-203ENST00000435201 PGAP2Q9UHJ9 254 aa18.48■□□□□ 0.55
LIMK1-203ENST00000435201 CETN3O15182 167 aa18.48■□□□□ 0.55
LIMK1-203ENST00000435201 VAV2P52735 878 aa18.48■□□□□ 0.55
LIMK1-203ENST00000435201 CXCL9Q07325 125 aa18.48■□□□□ 0.55
LIMK1-203ENST00000435201 PPP2R5CQ13362 524 aa18.48■□□□□ 0.55
LIMK1-203ENST00000435201 LRCH2Q5VUJ6 765 aa18.48■□□□□ 0.55
LIMK1-203ENST00000435201 TRIM59Q8IWR1 403 aa18.48■□□□□ 0.55
LIMK1-203ENST00000435201 CDAN1Q8IWY9 1227 aa18.48■□□□□ 0.55
LIMK1-203ENST00000435201 SLC5A5Q92911 643 aa18.48■□□□□ 0.55
LIMK1-203ENST00000435201 WDR18Q9BV38 432 aa18.48■□□□□ 0.55
LIMK1-203ENST00000435201 NUCKS1Q9H1E3 243 aaKnown RBP18.48■□□□□ 0.55
LIMK1-203ENST00000435201 ZNF446Q9NWS9 450 aa18.48■□□□□ 0.55
LIMK1-203ENST00000435201 RABGAP1Q9Y3P9 1069 aa18.48■□□□□ 0.55
LIMK1-203ENST00000435201 POTEB2H3BUK9 544 aa18.47■□□□□ 0.55
LIMK1-203ENST00000435201 EPHB6O15197 1021 aa18.47■□□□□ 0.55
LIMK1-203ENST00000435201 MUTP22033 750 aa18.47■□□□□ 0.55
LIMK1-203ENST00000435201 SETQ01105 290 aaPredicted RBP18.47■□□□□ 0.55
LIMK1-203ENST00000435201 AMPD2Q01433 879 aa18.47■□□□□ 0.55
LIMK1-203ENST00000435201 BMS1Q14692 1282 aaKnown RBP18.47■□□□□ 0.55
LIMK1-203ENST00000435201 EPM2AIP1Q7L775 607 aaPredicted RBP18.47■□□□□ 0.55
LIMK1-203ENST00000435201 OTOP1Q7RTM1 612 aa18.47■□□□□ 0.55
LIMK1-203ENST00000435201 DEFB129Q9H1M3 183 aa18.47■□□□□ 0.55
LIMK1-203ENST00000435201 FAM53CQ9NYF3 392 aa18.47■□□□□ 0.55
LIMK1-203ENST00000435201 TRIM10Q9UDY6 481 aa18.47■□□□□ 0.55
LIMK1-203ENST00000435201 TRAF3IP3Q9Y228 551 aa18.47■□□□□ 0.55
LIMK1-203ENST00000435201 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.47■□□□□ 0.55
LIMK1-203ENST00000435201 RBBP6Q7Z6E9 1792 aaKnown RBP18.47■□□□□ 0.55
LIMK1-203ENST00000435201 LRRC53A6NM62 1247 aa18.46■□□□□ 0.55
LIMK1-203ENST00000435201 EML1O00423 815 aa18.46■□□□□ 0.55
LIMK1-203ENST00000435201 WNT10BO00744 389 aa18.46■□□□□ 0.55
LIMK1-203ENST00000435201 TBCAO75347 108 aaKnown RBP18.46■□□□□ 0.55
LIMK1-203ENST00000435201 PSMD10O75832 226 aa18.46■□□□□ 0.55
LIMK1-203ENST00000435201 LCA5LO95447 670 aa18.46■□□□□ 0.55
LIMK1-203ENST00000435201 GAP43P17677 238 aa18.46■□□□□ 0.55
LIMK1-203ENST00000435201 CYP4A11Q02928 519 aa18.46■□□□□ 0.55
LIMK1-203ENST00000435201 KIF5AQ12840 1032 aa18.46■□□□□ 0.55
LIMK1-203ENST00000435201 ADAM9Q13443 819 aa18.46■□□□□ 0.55
LIMK1-203ENST00000435201 ZYXQ15942 572 aaKnown RBP18.46■□□□□ 0.55
LIMK1-203ENST00000435201 BMT2Q1RMZ1 405 aa18.46■□□□□ 0.55
LIMK1-203ENST00000435201 CIAPIN1Q6FI81 312 aa18.46■□□□□ 0.55
LIMK1-203ENST00000435201 PDXDC1Q6P996 788 aa18.46■□□□□ 0.55
LIMK1-203ENST00000435201 CACNA2D4Q7Z3S7 1137 aa18.46■□□□□ 0.55
LIMK1-203ENST00000435201 SFR1Q86XK3 245 aa18.46■□□□□ 0.55
LIMK1-203ENST00000435201 BAP1Q92560 729 aa18.46■□□□□ 0.55
LIMK1-203ENST00000435201 TBC1D5Q92609 795 aa18.46■□□□□ 0.55
LIMK1-203ENST00000435201 HSD17B14Q9BPX1 270 aa18.46■□□□□ 0.55
LIMK1-203ENST00000435201 BHMT2Q9H2M3 363 aa18.46■□□□□ 0.55
LIMK1-203ENST00000435201 MYOZ2Q9NPC6 264 aa18.46■□□□□ 0.55
LIMK1-203ENST00000435201 PIM2Q9P1W9 311 aa18.46■□□□□ 0.55
LIMK1-203ENST00000435201 CEP72Q9P209 647 aa18.46■□□□□ 0.55
LIMK1-203ENST00000435201 MYO6Q9UM54 1294 aa18.46■□□□□ 0.55
LIMK1-203ENST00000435201 CALUO43852 315 aaPredicted RBP18.46■□□□□ 0.54
LIMK1-203ENST00000435201 PRELPP51888 382 aa18.46■□□□□ 0.54
LIMK1-203ENST00000435201 KCNMA1Q12791 1236 aa18.46■□□□□ 0.54
LIMK1-203ENST00000435201 KNOP1Q1ED39 458 aaKnown RBP18.46■□□□□ 0.54
LIMK1-203ENST00000435201 CEP55Q53EZ4 464 aa18.46■□□□□ 0.54
LIMK1-203ENST00000435201 RRAGAQ7L523 313 aa18.46■□□□□ 0.54
LIMK1-203ENST00000435201 LDHDQ86WU2 507 aa18.46■□□□□ 0.54
LIMK1-203ENST00000435201 SMAP1Q8IYB5 467 aaPredicted RBP18.46■□□□□ 0.54
LIMK1-203ENST00000435201 KRT222Q8N1A0 295 aa18.46■□□□□ 0.54
LIMK1-203ENST00000435201 WDR11Q9BZH6 1224 aa18.46■□□□□ 0.54
LIMK1-203ENST00000435201 ARHGAP20Q9P2F6 1191 aa18.46■□□□□ 0.54
LIMK1-203ENST00000435201 FER1L6Q2WGJ9 1857 aa18.45■□□□□ 0.54
LIMK1-203ENST00000435201 PDXKO00764 312 aa18.45■□□□□ 0.54
LIMK1-203ENST00000435201 ATP8B1O43520 1251 aa18.45■□□□□ 0.54
LIMK1-203ENST00000435201 USO1O60763 962 aaKnown RBP18.45■□□□□ 0.54
LIMK1-203ENST00000435201 NR2F2P24468 414 aa18.45■□□□□ 0.54
LIMK1-203ENST00000435201 PTGER2P43116 358 aa18.45■□□□□ 0.54
LIMK1-203ENST00000435201 KIF11P52732 1056 aa18.45■□□□□ 0.54
LIMK1-203ENST00000435201 TGFB2P61812 414 aa18.45■□□□□ 0.54
LIMK1-203ENST00000435201 NBPF9Q3BBW0 867 aa18.45■□□□□ 0.54
LIMK1-203ENST00000435201 TXLNBQ8N3L3 684 aa18.45■□□□□ 0.54
LIMK1-203ENST00000435201 SYN2Q92777 582 aaPredicted RBP18.45■□□□□ 0.54
LIMK1-203ENST00000435201 PURBQ96QR8 312 aaKnown RBP18.45■□□□□ 0.54
LIMK1-203ENST00000435201 DEF6Q9H4E7 631 aa18.45■□□□□ 0.54
LIMK1-203ENST00000435201 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.45■□□□□ 0.54
LIMK1-203ENST00000435201 PUF60Q9UHX1 559 aaKnown RBP18.45■□□□□ 0.54
LIMK1-203ENST00000435201 LOXHD1Q8IVV2 1947 aa18.45■□□□□ 0.54
LIMK1-203ENST00000435201 CTAGE15A4D2H0 777 aa18.44■□□□□ 0.54
LIMK1-203ENST00000435201 GAS7O60861 476 aa18.44■□□□□ 0.54
LIMK1-203ENST00000435201 ZRANB2O95218 330 aaKnown RBP eCLIP18.44■□□□□ 0.54
LIMK1-203ENST00000435201 ICAM1P05362 532 aa18.44■□□□□ 0.54
LIMK1-203ENST00000435201 CTAGE8P0CG41 777 aa18.44■□□□□ 0.54
LIMK1-203ENST00000435201 CASP5P51878 434 aa18.44■□□□□ 0.54
LIMK1-203ENST00000435201 TRAPPC11Q7Z392 1133 aa18.44■□□□□ 0.54
LIMK1-203ENST00000435201 KRT26Q7Z3Y9 468 aa18.44■□□□□ 0.54
LIMK1-203ENST00000435201 FRMD5Q7Z6J6 570 aa18.44■□□□□ 0.54
LIMK1-203ENST00000435201 CTAGE6Q86UF2 777 aa18.44■□□□□ 0.54
LIMK1-203ENST00000435201 CTAGE4Q8IX94 777 aa18.44■□□□□ 0.54
LIMK1-203ENST00000435201 SMCR8Q8TEV9 937 aaPredicted RBP18.44■□□□□ 0.54
LIMK1-203ENST00000435201 JDP2Q8WYK2 163 aa18.44■□□□□ 0.54
LIMK1-203ENST00000435201 RUSC1Q9BVN2 902 aa18.44■□□□□ 0.54
LIMK1-203ENST00000435201 OLFML3Q9NRN5 406 aa18.44■□□□□ 0.54
LIMK1-203ENST00000435201 GINM1Q9NU53 330 aa18.44■□□□□ 0.54
LIMK1-203ENST00000435201 RGL1Q9NZL6 768 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms