RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 NOP2P46087 812 aaKnown RBP17.18■□□□□ 0.34
SCARF1-203ENST00000434376 CASP4P49662 377 aa17.18■□□□□ 0.34
SCARF1-203ENST00000434376 KCNB1Q14721 858 aa17.18■□□□□ 0.34
SCARF1-203ENST00000434376 MIIPQ5JXC2 388 aa17.18■□□□□ 0.34
SCARF1-203ENST00000434376 C15orf52Q6ZUT6 534 aaKnown RBP17.18■□□□□ 0.34
SCARF1-203ENST00000434376 HDXQ7Z353 690 aa17.18■□□□□ 0.34
SCARF1-203ENST00000434376 ELOA2Q8IYF1 753 aaPredicted RBP17.18■□□□□ 0.34
SCARF1-203ENST00000434376 GOLGA5Q8TBA6 731 aa17.18■□□□□ 0.34
SCARF1-203ENST00000434376 THAP9Q9H5L6 903 aa17.18■□□□□ 0.34
SCARF1-203ENST00000434376 DNM3Q9UQ16 869 aa17.18■□□□□ 0.34
SCARF1-203ENST00000434376 HYOU1Q9Y4L1 999 aa17.18■□□□□ 0.34
SCARF1-203ENST00000434376 LAMB2P55268 1798 aa17.18■□□□□ 0.34
SCARF1-203ENST00000434376 COL22A1Q8NFW1 1626 aaPredicted RBP17.18■□□□□ 0.34
SCARF1-203ENST00000434376 CCDC65Q8IXS2 484 aa17.18■□□□□ 0.34
SCARF1-203ENST00000434376 SPAG5Q96R06 1193 aa17.18■□□□□ 0.34
SCARF1-203ENST00000434376 CHORDC1Q9UHD1 332 aaPredicted RBP17.18■□□□□ 0.34
SCARF1-203ENST00000434376 TBCAO75347 108 aaKnown RBP17.18■□□□□ 0.34
SCARF1-203ENST00000434376 MAGEA1P43355 309 aa17.18■□□□□ 0.34
SCARF1-203ENST00000434376 VSNL1P62760 191 aa17.18■□□□□ 0.34
SCARF1-203ENST00000434376 TMEM179Q6ZVK1 233 aa17.18■□□□□ 0.34
SCARF1-203ENST00000434376 SAMD7Q7Z3H4 446 aa17.18■□□□□ 0.34
SCARF1-203ENST00000434376 FAM114A1Q8IWE2 563 aa17.18■□□□□ 0.34
SCARF1-203ENST00000434376 CCDC17Q96LX7 622 aa17.18■□□□□ 0.34
SCARF1-203ENST00000434376 CCDC43Q96MW1 224 aaKnown RBP17.18■□□□□ 0.34
SCARF1-203ENST00000434376 REEP2Q9BRK0 252 aa17.18■□□□□ 0.34
SCARF1-203ENST00000434376 ZNF341Q9BYN7 854 aa17.18■□□□□ 0.34
SCARF1-203ENST00000434376 CAPN6Q9Y6Q1 641 aa17.18■□□□□ 0.34
SCARF1-203ENST00000434376 STAT2P52630 851 aa17.17■□□□□ 0.34
SCARF1-203ENST00000434376 DNAJC21Q5F1R6 531 aaKnown RBP17.17■□□□□ 0.34
SCARF1-203ENST00000434376 NFRKBQ6P4R8 1299 aa17.17■□□□□ 0.34
SCARF1-203ENST00000434376 SRGAP1Q7Z6B7 1085 aa17.17■□□□□ 0.34
SCARF1-203ENST00000434376 CCDC88AQ3V6T2 1871 aa17.17■□□□□ 0.34
SCARF1-203ENST00000434376 KRT86O43790 486 aa17.17■□□□□ 0.34
SCARF1-203ENST00000434376 SLC9A1P19634 815 aa17.17■□□□□ 0.34
SCARF1-203ENST00000434376 DYDC2Q96IM9 177 aa17.17■□□□□ 0.34
SCARF1-203ENST00000434376 MS4A14Q96JA4 679 aa17.17■□□□□ 0.34
SCARF1-203ENST00000434376 RUSC1Q9BVN2 902 aa17.17■□□□□ 0.34
SCARF1-203ENST00000434376 ARHGAP20Q9P2F6 1191 aa17.17■□□□□ 0.34
SCARF1-203ENST00000434376 TCEAL9Q9UHQ7 104 aa17.17■□□□□ 0.34
SCARF1-203ENST00000434376 CCDC151A5D8V7 595 aa17.16■□□□□ 0.34
SCARF1-203ENST00000434376 EIF2AK2P19525 551 aaKnown RBP17.16■□□□□ 0.34
SCARF1-203ENST00000434376 KCNJ6P48051 423 aa17.16■□□□□ 0.34
SCARF1-203ENST00000434376 GTF2A1P52655 376 aaPredicted RBP17.16■□□□□ 0.34
SCARF1-203ENST00000434376 COG2Q14746 738 aa17.16■□□□□ 0.34
SCARF1-203ENST00000434376 ZNF507Q8TCN5 953 aa17.16■□□□□ 0.34
SCARF1-203ENST00000434376 CNKSR1Q969H4 720 aa17.16■□□□□ 0.34
SCARF1-203ENST00000434376 SCN7AQ01118 1682 aa17.16■□□□□ 0.34
SCARF1-203ENST00000434376 ARAP2Q8WZ64 1704 aa17.16■□□□□ 0.34
SCARF1-203ENST00000434376 TISP43B9A030 160 aa17.16■□□□□ 0.34
SCARF1-203ENST00000434376 ZNF263O14978 683 aa17.16■□□□□ 0.34
SCARF1-203ENST00000434376 MSH4O15457 936 aa17.16■□□□□ 0.34
SCARF1-203ENST00000434376 CYP11B2P19099 503 aa17.16■□□□□ 0.34
SCARF1-203ENST00000434376 KIF11P52732 1056 aa17.16■□□□□ 0.34
SCARF1-203ENST00000434376 LRCH2Q5VUJ6 765 aa17.16■□□□□ 0.34
SCARF1-203ENST00000434376 RIN2Q8WYP3 895 aaPredicted RBP17.16■□□□□ 0.34
SCARF1-203ENST00000434376 USP20Q9Y2K6 914 aa17.16■□□□□ 0.34
SCARF1-203ENST00000434376 CCDC181Q5TID7 509 aa17.16■□□□□ 0.34
SCARF1-203ENST00000434376 ADAT2Q7Z6V5 191 aaKnown RBP17.16■□□□□ 0.34
SCARF1-203ENST00000434376 SRLQ86TD4 932 aa17.16■□□□□ 0.34
SCARF1-203ENST00000434376 EXOC4Q96A65 974 aa17.16■□□□□ 0.34
SCARF1-203ENST00000434376 NAA15Q9BXJ9 866 aaKnown RBP17.16■□□□□ 0.34
SCARF1-203ENST00000434376 RAVER2Q9HCJ3 691 aaKnown RBP17.16■□□□□ 0.34
SCARF1-203ENST00000434376 CAPN11Q9UMQ6 739 aa17.16■□□□□ 0.34
SCARF1-203ENST00000434376 LRRC10BA6NIK2 292 aa17.15■□□□□ 0.34
SCARF1-203ENST00000434376 SLC15A2Q16348 729 aa17.15■□□□□ 0.34
SCARF1-203ENST00000434376 ARHGAP44Q17R89 818 aa17.15■□□□□ 0.34
SCARF1-203ENST00000434376 RSRC2Q7L4I2 434 aaKnown RBP17.15■□□□□ 0.34
SCARF1-203ENST00000434376 PACSIN1Q9BY11 444 aa17.15■□□□□ 0.34
SCARF1-203ENST00000434376 DHX36Q9H2U1 1008 aaKnown RBP17.15■□□□□ 0.34
SCARF1-203ENST00000434376 GAS7O60861 476 aa17.15■□□□□ 0.34
SCARF1-203ENST00000434376 FAM13AO94988 1023 aa17.15■□□□□ 0.34
SCARF1-203ENST00000434376 SYCP3Q8IZU3 236 aa17.15■□□□□ 0.34
SCARF1-203ENST00000434376 SAR1BQ9Y6B6 198 aa17.15■□□□□ 0.34
SCARF1-203ENST00000434376 IGKV6D-41A0A0C4DH26 115 aa17.14■□□□□ 0.34
SCARF1-203ENST00000434376 TRIM49P0CI25 452 aa17.14■□□□□ 0.34
SCARF1-203ENST00000434376 TRIM49CP0CI26 452 aa17.14■□□□□ 0.34
SCARF1-203ENST00000434376 ARP10275 920 aa17.14■□□□□ 0.34
SCARF1-203ENST00000434376 COL5A3P25940 1745 aaPredicted RBP17.14■□□□□ 0.34
SCARF1-203ENST00000434376 TTLL6Q8N841 843 aa17.14■□□□□ 0.34
SCARF1-203ENST00000434376 GPATCH11Q8N954 259 aa17.14■□□□□ 0.34
SCARF1-203ENST00000434376 COG1Q8WTW3 980 aa17.14■□□□□ 0.34
SCARF1-203ENST00000434376 SCFD1Q8WVM8 642 aa17.14■□□□□ 0.34
SCARF1-203ENST00000434376 SECISBP2LQ93073 1101 aaKnown RBP17.14■□□□□ 0.34
SCARF1-203ENST00000434376 DNAJC19Q96DA6 116 aa17.14■□□□□ 0.34
SCARF1-203ENST00000434376 FAM204AQ9H8W3 233 aa17.14■□□□□ 0.34
SCARF1-203ENST00000434376 COL4A3BPQ9Y5P4 624 aa17.14■□□□□ 0.34
SCARF1-203ENST00000434376 SNHG28P0DPA3 235 aa17.14■□□□□ 0.33
SCARF1-203ENST00000434376 ZBED6P86452 979 aa17.14■□□□□ 0.33
SCARF1-203ENST00000434376 FKBP3Q00688 224 aaKnown RBP17.14■□□□□ 0.33
SCARF1-203ENST00000434376 MAN2A1Q16706 1144 aa17.14■□□□□ 0.33
SCARF1-203ENST00000434376 ZNF70Q9UC06 446 aaPredicted RBP17.14■□□□□ 0.33
SCARF1-203ENST00000434376 ESYT3A0FGR9 886 aa17.14■□□□□ 0.33
SCARF1-203ENST00000434376 LRRN2O75325 713 aa17.14■□□□□ 0.33
SCARF1-203ENST00000434376 FXR2P51116 673 aaKnown RBP eCLIP17.14■□□□□ 0.33
SCARF1-203ENST00000434376 IRX3P78415 501 aaPredicted RBP17.14■□□□□ 0.33
SCARF1-203ENST00000434376 MKRN4PQ13434 485 aaPredicted RBP17.14■□□□□ 0.33
SCARF1-203ENST00000434376 ARHGEF10LQ9HCE6 1279 aa17.14■□□□□ 0.33
SCARF1-203ENST00000434376 STK17AQ9UEE5 414 aa17.14■□□□□ 0.33
SCARF1-203ENST00000434376 ATP8B1O43520 1251 aa17.13■□□□□ 0.33
SCARF1-203ENST00000434376 ABCB4P21439 1286 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms