RNA–Protein interactions for RNA: ENST00000434046.6

SYNPO2-203, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-203ENST00000434046 CALML4Q96GE6 196 aa8.1□□□□□ -1.11
SYNPO2-203ENST00000434046 TSG101Q99816 390 aa8.1□□□□□ -1.11
SYNPO2-203ENST00000434046 GOLPH3Q9H4A6 298 aa8.1□□□□□ -1.11
SYNPO2-203ENST00000434046 INTS9Q9NV88 658 aaKnown RBP8.1□□□□□ -1.11
SYNPO2-203ENST00000434046 CNTNAP4Q9C0A0 1308 aa8.09□□□□□ -1.11
SYNPO2-203ENST00000434046 LRRC10BA6NIK2 292 aa8.09□□□□□ -1.11
SYNPO2-203ENST00000434046 FOXP2O15409 715 aa8.09□□□□□ -1.11
SYNPO2-203ENST00000434046 RGS16O15492 202 aaPredicted RBP8.09□□□□□ -1.11
SYNPO2-203ENST00000434046 UPP2O95045 317 aa8.09□□□□□ -1.11
SYNPO2-203ENST00000434046 PDHA1P08559 390 aa8.09□□□□□ -1.11
SYNPO2-203ENST00000434046 CYP2D6P10635 497 aa8.09□□□□□ -1.11
SYNPO2-203ENST00000434046 KLHL30Q0D2K2 578 aa8.09□□□□□ -1.11
SYNPO2-203ENST00000434046 DOK7Q18PE1 504 aa8.09□□□□□ -1.11
SYNPO2-203ENST00000434046 SFMBT2Q5VUG0 894 aa8.09□□□□□ -1.11
SYNPO2-203ENST00000434046 CCDC84Q86UT8 332 aaPredicted RBP8.09□□□□□ -1.11
SYNPO2-203ENST00000434046 NLGN1Q8N2Q7 840 aa8.09□□□□□ -1.11
SYNPO2-203ENST00000434046 CCDC155Q8N6L0 562 aa8.09□□□□□ -1.11
SYNPO2-203ENST00000434046 DYNLL2Q96FJ2 89 aa8.09□□□□□ -1.11
SYNPO2-203ENST00000434046 PAIP2Q9BPZ3 127 aaKnown RBP8.09□□□□□ -1.11
SYNPO2-203ENST00000434046 GPCPD1Q9NPB8 672 aa8.09□□□□□ -1.11
SYNPO2-203ENST00000434046 DCP1AQ9NPI6 582 aaPredicted RBP8.09□□□□□ -1.11
SYNPO2-203ENST00000434046 TRPC6Q9Y210 931 aa8.09□□□□□ -1.11
SYNPO2-203ENST00000434046 UTP11Q9Y3A2 253 aaKnown RBP8.09□□□□□ -1.11
SYNPO2-203ENST00000434046 KDM3BQ7LBC6 1761 aa8.09□□□□□ -1.11
SYNPO2-203ENST00000434046 PDS5AQ29RF7 1337 aaKnown RBP8.09□□□□□ -1.11
SYNPO2-203ENST00000434046 CCT8L1PA6NM43 557 aa8.09□□□□□ -1.11
SYNPO2-203ENST00000434046 WNT7AO00755 349 aa8.09□□□□□ -1.11
SYNPO2-203ENST00000434046 DAPK3O43293 454 aa8.09□□□□□ -1.11
SYNPO2-203ENST00000434046 MRPL12P52815 198 aaKnown RBP8.09□□□□□ -1.11
SYNPO2-203ENST00000434046 POLR2FP61218 127 aaKnown RBP8.09□□□□□ -1.11
SYNPO2-203ENST00000434046 ELF3P78545 371 aaPredicted RBP8.09□□□□□ -1.11
SYNPO2-203ENST00000434046 ITGB3BPQ13352 177 aaPredicted RBP8.09□□□□□ -1.11
SYNPO2-203ENST00000434046 ARMC9Q7Z3E5 817 aa8.09□□□□□ -1.11
SYNPO2-203ENST00000434046 VGLL2Q8N8G2 317 aa8.09□□□□□ -1.11
SYNPO2-203ENST00000434046 ANKRD42Q8N9B4 389 aa8.09□□□□□ -1.11
SYNPO2-203ENST00000434046 CCDC26Q8TAB7 109 aa8.09□□□□□ -1.11
SYNPO2-203ENST00000434046 MTMR8Q96EF0 704 aa8.09□□□□□ -1.11
SYNPO2-203ENST00000434046 PSMD1Q99460 953 aa8.09□□□□□ -1.11
SYNPO2-203ENST00000434046 TMBIM4Q9HC24 238 aa8.09□□□□□ -1.11
SYNPO2-203ENST00000434046 ARHGAP20Q9P2F6 1191 aa8.09□□□□□ -1.11
SYNPO2-203ENST00000434046 ADAMTS1Q9UHI8 967 aa8.09□□□□□ -1.11
SYNPO2-203ENST00000434046 PNMA2Q9UL42 364 aa8.09□□□□□ -1.11
SYNPO2-203ENST00000434046 TRAF5O00463 557 aa8.09□□□□□ -1.12
SYNPO2-203ENST00000434046 HIP1RO75146 1068 aa8.09□□□□□ -1.12
SYNPO2-203ENST00000434046 GOLGA8HP0CJ92 632 aa8.09□□□□□ -1.12
SYNPO2-203ENST00000434046 NEFHP12036 1026 aa8.09□□□□□ -1.12
SYNPO2-203ENST00000434046 CCNE1P24864 410 aa8.09□□□□□ -1.12
SYNPO2-203ENST00000434046 ALDH1B1P30837 517 aa8.09□□□□□ -1.12
SYNPO2-203ENST00000434046 TNNI2P48788 182 aa8.09□□□□□ -1.12
SYNPO2-203ENST00000434046 AMPD3Q01432 767 aa8.09□□□□□ -1.12
SYNPO2-203ENST00000434046 BIRC3Q13489 604 aa8.09□□□□□ -1.12
SYNPO2-203ENST00000434046 CDC37Q16543 378 aaPredicted RBP8.09□□□□□ -1.12
SYNPO2-203ENST00000434046 ANKRD40Q6AI12 368 aa8.09□□□□□ -1.12
SYNPO2-203ENST00000434046 FAM43BQ6ZT52 329 aaPredicted RBP8.09□□□□□ -1.12
SYNPO2-203ENST00000434046 HOOK3Q86VS8 718 aa8.09□□□□□ -1.12
SYNPO2-203ENST00000434046 ENAHQ8N8S7 591 aaPredicted RBP8.09□□□□□ -1.12
SYNPO2-203ENST00000434046 FBF1Q8TES7 1133 aa8.09□□□□□ -1.12
SYNPO2-203ENST00000434046 GPKOWQ92917 476 aaPredicted RBP eCLIP8.09□□□□□ -1.12
SYNPO2-203ENST00000434046 IFT74Q96LB3 600 aa8.09□□□□□ -1.12
SYNPO2-203ENST00000434046 TSC22D3Q99576 134 aa8.09□□□□□ -1.12
SYNPO2-203ENST00000434046 TLR10Q9BXR5 811 aa8.09□□□□□ -1.12
SYNPO2-203ENST00000434046 NDST4Q9H3R1 872 aa8.09□□□□□ -1.12
SYNPO2-203ENST00000434046 BATF3Q9NR55 127 aa8.09□□□□□ -1.12
SYNPO2-203ENST00000434046 SCNN1DP51172 638 aa8.08□□□□□ -1.12
SYNPO2-203ENST00000434046 SPRED3Q2MJR0 410 aa8.08□□□□□ -1.12
SYNPO2-203ENST00000434046 WLSQ5T9L3 541 aa8.08□□□□□ -1.12
SYNPO2-203ENST00000434046 THEMIS2Q5TEJ8 643 aa8.08□□□□□ -1.12
SYNPO2-203ENST00000434046 SH3RF1Q7Z6J0 888 aa8.08□□□□□ -1.12
SYNPO2-203ENST00000434046 LMNTD2Q8IXW0 634 aa8.08□□□□□ -1.12
SYNPO2-203ENST00000434046 RUBCNQ92622 972 aa8.08□□□□□ -1.12
SYNPO2-203ENST00000434046 DISC1Q9NRI5 854 aa8.08□□□□□ -1.12
SYNPO2-203ENST00000434046 KLRF2D3W0D1 207 aa8.08□□□□□ -1.12
SYNPO2-203ENST00000434046 H0YIN7 160 aa8.08□□□□□ -1.12
SYNPO2-203ENST00000434046 ZNF263O14978 683 aa8.08□□□□□ -1.12
SYNPO2-203ENST00000434046 TRAPPC3O43617 180 aa8.08□□□□□ -1.12
SYNPO2-203ENST00000434046 FCER1AP12319 257 aa8.08□□□□□ -1.12
SYNPO2-203ENST00000434046 ADRA2BP18089 450 aa8.08□□□□□ -1.12
SYNPO2-203ENST00000434046 FECHP22830 423 aa8.08□□□□□ -1.12
SYNPO2-203ENST00000434046 TCP10Q12799 353 aa8.08□□□□□ -1.12
SYNPO2-203ENST00000434046 TCERG1LQ5VWI1 586 aa8.08□□□□□ -1.12
SYNPO2-203ENST00000434046 DENND2CQ68D51 928 aa8.08□□□□□ -1.12
SYNPO2-203ENST00000434046 ZNF772Q68DY9 489 aaPredicted RBP8.08□□□□□ -1.12
SYNPO2-203ENST00000434046 PEX26Q7Z412 305 aa8.08□□□□□ -1.12
SYNPO2-203ENST00000434046 IRF2BP1Q8IU81 584 aa8.08□□□□□ -1.12
SYNPO2-203ENST00000434046 NSUN4Q96CB9 384 aaKnown RBP8.08□□□□□ -1.12
SYNPO2-203ENST00000434046 DHTKD1Q96HY7 919 aaPredicted RBP8.08□□□□□ -1.12
SYNPO2-203ENST00000434046 LSM14BQ9BX40 385 aaKnown RBP8.08□□□□□ -1.12
SYNPO2-203ENST00000434046 MLXIPLQ9NP71 852 aa8.08□□□□□ -1.12
SYNPO2-203ENST00000434046 USP40Q9NVE5 1235 aa8.08□□□□□ -1.12
SYNPO2-203ENST00000434046 RNF14Q9UBS8 474 aa8.08□□□□□ -1.12
SYNPO2-203ENST00000434046 AMACRQ9UHK6 382 aa8.08□□□□□ -1.12
SYNPO2-203ENST00000434046 ATXN2Q99700 1313 aaKnown RBP8.08□□□□□ -1.12
SYNPO2-203ENST00000434046 LRRD1A4D1F6 860 aa8.07□□□□□ -1.12
SYNPO2-203ENST00000434046 EME2A4GXA9 379 aaPredicted RBP8.07□□□□□ -1.12
SYNPO2-203ENST00000434046 PPEF1O14829 653 aaPredicted RBP8.07□□□□□ -1.12
SYNPO2-203ENST00000434046 SESN3P58005 492 aa8.07□□□□□ -1.12
SYNPO2-203ENST00000434046 ATP2C1P98194 919 aaPredicted RBP8.07□□□□□ -1.12
SYNPO2-203ENST00000434046 PSMD2Q13200 908 aa8.07□□□□□ -1.12
SYNPO2-203ENST00000434046 LRRC41Q15345 812 aa8.07□□□□□ -1.12
SYNPO2-203ENST00000434046 CCDC6Q16204 474 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms