RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 APOBEC3FQ8IUX4 373 aaKnown RBP4.1□□□□□ -1.75
SHPRH-205ENST00000433355 NIM1KQ8IY84 436 aa4.1□□□□□ -1.75
SHPRH-205ENST00000433355 NSUN4Q96CB9 384 aaKnown RBP4.1□□□□□ -1.75
SHPRH-205ENST00000433355 STAT2P52630 851 aa4.1□□□□□ -1.75
SHPRH-205ENST00000433355 NAP1L1P55209 391 aaKnown RBP4.1□□□□□ -1.75
SHPRH-205ENST00000433355 PALB2Q86YC2 1186 aa4.1□□□□□ -1.75
SHPRH-205ENST00000433355 SPIRE2Q8WWL2 714 aa4.1□□□□□ -1.75
SHPRH-205ENST00000433355 FUCA2Q9BTY2 467 aa4.1□□□□□ -1.75
SHPRH-205ENST00000433355 FETUBQ9UGM5 382 aa4.1□□□□□ -1.75
SHPRH-205ENST00000433355 FEM1BQ9UK73 627 aa4.1□□□□□ -1.75
SHPRH-205ENST00000433355 GOLGA8JA6NMD2 632 aa4.1□□□□□ -1.75
SHPRH-205ENST00000433355 MINDY4BA8MYZ0 360 aa4.1□□□□□ -1.75
SHPRH-205ENST00000433355 WDR64B1ANS9 1081 aa4.1□□□□□ -1.75
SHPRH-205ENST00000433355 KRT9P35527 623 aa4.1□□□□□ -1.75
SHPRH-205ENST00000433355 HADHAP40939 763 aa4.1□□□□□ -1.75
SHPRH-205ENST00000433355 PDE6CP51160 858 aa4.1□□□□□ -1.75
SHPRH-205ENST00000433355 ADCY2Q08462 1091 aa4.1□□□□□ -1.75
SHPRH-205ENST00000433355 RPS6KA1Q15418 735 aa4.1□□□□□ -1.75
SHPRH-205ENST00000433355 SPATA18Q8TC71 538 aa4.1□□□□□ -1.75
SHPRH-205ENST00000433355 SLC7A3Q8WY07 619 aa4.1□□□□□ -1.75
SHPRH-205ENST00000433355 GPRASP2Q96D09 838 aa4.1□□□□□ -1.75
SHPRH-205ENST00000433355 DDX60LQ5H9U9 1706 aaKnown RBP4.1□□□□□ -1.75
SHPRH-205ENST00000433355 GAS7O60861 476 aa4.1□□□□□ -1.75
SHPRH-205ENST00000433355 POLR2MP0CAP2 368 aa4.1□□□□□ -1.75
SHPRH-205ENST00000433355 GCNT1Q02742 428 aa4.1□□□□□ -1.75
SHPRH-205ENST00000433355 C12orf60Q5U649 245 aa4.1□□□□□ -1.75
SHPRH-205ENST00000433355 LRRC38Q5VT99 294 aa4.1□□□□□ -1.75
SHPRH-205ENST00000433355 AFAP1L1Q8TED9 768 aa4.1□□□□□ -1.75
SHPRH-205ENST00000433355 KCNQ5Q9NR82 932 aa4.1□□□□□ -1.75
SHPRH-205ENST00000433355 ANKEF1Q9NU02 776 aa4.1□□□□□ -1.75
SHPRH-205ENST00000433355 USP40Q9NVE5 1235 aa4.1□□□□□ -1.75
SHPRH-205ENST00000433355 CAPN11Q9UMQ6 739 aa4.1□□□□□ -1.75
SHPRH-205ENST00000433355 PCDHA5Q9Y5H7 936 aa4.1□□□□□ -1.75
SHPRH-205ENST00000433355 SEC24BO95487 1268 aa4.1□□□□□ -1.75
SHPRH-205ENST00000433355 TSNAXIP1Q2TAA8 658 aa4.1□□□□□ -1.75
SHPRH-205ENST00000433355 ADSSL1Q8N142 457 aa4.1□□□□□ -1.75
SHPRH-205ENST00000433355 CCDC89Q8N998 374 aa4.1□□□□□ -1.75
SHPRH-205ENST00000433355 NELFBQ8WX92 580 aa4.1□□□□□ -1.75
SHPRH-205ENST00000433355 KRT35Q92764 455 aa4.1□□□□□ -1.75
SHPRH-205ENST00000433355 MKL1Q969V6 931 aa4.1□□□□□ -1.75
SHPRH-205ENST00000433355 CSRNP1Q96S65 589 aa4.1□□□□□ -1.75
SHPRH-205ENST00000433355 TUBGCP2Q9BSJ2 902 aa4.1□□□□□ -1.75
SHPRH-205ENST00000433355 FGFR1OP2Q9NVK5 253 aa4.1□□□□□ -1.75
SHPRH-205ENST00000433355 ZNF646O15015 1829 aaPredicted RBP4.1□□□□□ -1.75
SHPRH-205ENST00000433355 SARNPP82979 210 aaKnown RBP4.1□□□□□ -1.75
SHPRH-205ENST00000433355 RBSNQ9H1K0 784 aa4.1□□□□□ -1.75
SHPRH-205ENST00000433355 TRPC6Q9Y210 931 aa4.1□□□□□ -1.75
SHPRH-205ENST00000433355 ATP5J2-PTCD1G3V325 749 aa4.09□□□□□ -1.75
SHPRH-205ENST00000433355 H0YIN7 160 aa4.09□□□□□ -1.75
SHPRH-205ENST00000433355 NDUFAB1O14561 156 aa4.09□□□□□ -1.75
SHPRH-205ENST00000433355 TBC1D12O60347 775 aa4.09□□□□□ -1.75
SHPRH-205ENST00000433355 RPS6KA5O75582 802 aa4.09□□□□□ -1.75
SHPRH-205ENST00000433355 H2AFZP0C0S5 128 aa4.09□□□□□ -1.75
SHPRH-205ENST00000433355 LMOD1P29536 600 aaPredicted RBP4.09□□□□□ -1.75
SHPRH-205ENST00000433355 CCT6AP40227 531 aaKnown RBP4.09□□□□□ -1.75
SHPRH-205ENST00000433355 SLC4A3P48751 1232 aa4.09□□□□□ -1.75
SHPRH-205ENST00000433355 FKBP1BP68106 108 aa4.09□□□□□ -1.75
SHPRH-205ENST00000433355 SH2D4BQ5SQS7 431 aa4.09□□□□□ -1.75
SHPRH-205ENST00000433355 FYB2Q5VWT5 728 aa4.09□□□□□ -1.75
SHPRH-205ENST00000433355 H2AFVQ71UI9 128 aa4.09□□□□□ -1.75
SHPRH-205ENST00000433355 LRP10Q7Z4F1 713 aa4.09□□□□□ -1.75
SHPRH-205ENST00000433355 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.09□□□□□ -1.75
SHPRH-205ENST00000433355 IQCGQ9H095 443 aaKnown RBP4.09□□□□□ -1.75
SHPRH-205ENST00000433355 ZSWIM4Q9H7M6 989 aa4.09□□□□□ -1.75
SHPRH-205ENST00000433355 MRPL40Q9NQ50 206 aaKnown RBP4.09□□□□□ -1.75
SHPRH-205ENST00000433355 KIAA1257Q9ULG3 409 aa4.09□□□□□ -1.75
SHPRH-205ENST00000433355 VWA3AA6NCI4 1184 aa4.09□□□□□ -1.75
SHPRH-205ENST00000433355 PFDN6O15212 129 aa4.09□□□□□ -1.75
SHPRH-205ENST00000433355 NEFHP12036 1026 aa4.09□□□□□ -1.75
SHPRH-205ENST00000433355 AARSP49588 968 aaKnown RBP eCLIP4.09□□□□□ -1.75
SHPRH-205ENST00000433355 CEP55Q53EZ4 464 aa4.09□□□□□ -1.75
SHPRH-205ENST00000433355 TDRD12Q587J7 1177 aaKnown RBP4.09□□□□□ -1.75
SHPRH-205ENST00000433355 HEATR3Q7Z4Q2 680 aa4.09□□□□□ -1.75
SHPRH-205ENST00000433355 C12orf56Q8IXR9 622 aa4.09□□□□□ -1.75
SHPRH-205ENST00000433355 MMGT1Q8N4V1 131 aa4.09□□□□□ -1.75
SHPRH-205ENST00000433355 TCP11Q8WWU5 503 aa4.09□□□□□ -1.75
SHPRH-205ENST00000433355 MAML3Q96JK9 1138 aa4.09□□□□□ -1.75
SHPRH-205ENST00000433355 RETREG1Q9H6L5 497 aa4.09□□□□□ -1.75
SHPRH-205ENST00000433355 ZNF277Q9NRM2 450 aaPredicted RBP4.09□□□□□ -1.75
SHPRH-205ENST00000433355 MRFAP1Q9Y605 127 aa4.09□□□□□ -1.75
SHPRH-205ENST00000433355 ERI2A8K979 691 aaKnown RBP4.09□□□□□ -1.75
SHPRH-205ENST00000433355 TADA3O75528 432 aa4.09□□□□□ -1.75
SHPRH-205ENST00000433355 ZWINTO95229 277 aa4.09□□□□□ -1.75
SHPRH-205ENST00000433355 SLC18A1P54219 525 aa4.09□□□□□ -1.75
SHPRH-205ENST00000433355 IKQ13123 557 aaPredicted RBP4.09□□□□□ -1.75
SHPRH-205ENST00000433355 AFG1LQ8WV93 481 aa4.09□□□□□ -1.75
SHPRH-205ENST00000433355 RFFLQ8WZ73 363 aa4.09□□□□□ -1.75
SHPRH-205ENST00000433355 ZNF592Q92610 1267 aa4.09□□□□□ -1.75
SHPRH-205ENST00000433355 SGSM3Q96HU1 749 aa4.09□□□□□ -1.75
SHPRH-205ENST00000433355 INO80BQ9C086 356 aaPredicted RBP4.09□□□□□ -1.75
SHPRH-205ENST00000433355 NDST4Q9H3R1 872 aa4.09□□□□□ -1.75
SHPRH-205ENST00000433355 RBM47A0AV96 593 aaKnown RBP4.09□□□□□ -1.75
SHPRH-205ENST00000433355 FAM187AA6NFU0 413 aa4.09□□□□□ -1.75
SHPRH-205ENST00000433355 E7ENQ6 273 aa4.09□□□□□ -1.75
SHPRH-205ENST00000433355 O00370 1275 aa4.09□□□□□ -1.75
SHPRH-205ENST00000433355 SERPING1P05155 500 aa4.09□□□□□ -1.75
SHPRH-205ENST00000433355 SETSIPP0DME0 302 aa4.09□□□□□ -1.75
SHPRH-205ENST00000433355 HTR7P34969 479 aa4.09□□□□□ -1.75
SHPRH-205ENST00000433355 ZNF131P52739 623 aa4.09□□□□□ -1.75
SHPRH-205ENST00000433355 COPB1P53618 953 aaKnown RBP4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms