RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 MAN2A1Q16706 1144 aa14.23□□□□□ -0.13
DDX56-204ENST00000431640 VWA3BQ502W6 1294 aa14.23□□□□□ -0.13
DDX56-204ENST00000431640 FAM26FQ5R3K3 315 aa14.23□□□□□ -0.13
DDX56-204ENST00000431640 FAM83BQ5T0W9 1011 aa14.23□□□□□ -0.13
DDX56-204ENST00000431640 ANKRD13AQ8IZ07 590 aa14.23□□□□□ -0.13
DDX56-204ENST00000431640 DESI2Q9BSY9 194 aa14.23□□□□□ -0.13
DDX56-204ENST00000431640 POLR3CQ9BUI4 534 aaPredicted RBP14.23□□□□□ -0.13
DDX56-204ENST00000431640 WDR18Q9BV38 432 aa14.23□□□□□ -0.13
DDX56-204ENST00000431640 KIAA1683Q9H0B3 1180 aa14.23□□□□□ -0.13
DDX56-204ENST00000431640 PICK1Q9NRD5 415 aa14.23□□□□□ -0.13
DDX56-204ENST00000431640 EMILIN3Q9NT22 766 aa14.23□□□□□ -0.13
DDX56-204ENST00000431640 RABGAP1Q9Y3P9 1069 aa14.23□□□□□ -0.13
DDX56-204ENST00000431640 EPN1Q9Y6I3 576 aaPredicted RBP14.23□□□□□ -0.13
DDX56-204ENST00000431640 ZHX2Q9Y6X8 837 aa14.23□□□□□ -0.13
DDX56-204ENST00000431640 SPDYE5A6NIY4 337 aa14.22□□□□□ -0.13
DDX56-204ENST00000431640 E9PMD0 336 aa14.22□□□□□ -0.13
DDX56-204ENST00000431640 KRT18P05783 430 aaKnown RBP14.22□□□□□ -0.13
DDX56-204ENST00000431640 TRIM21P19474 475 aaKnown RBP14.22□□□□□ -0.13
DDX56-204ENST00000431640 KRT83P78385 493 aa14.22□□□□□ -0.13
DDX56-204ENST00000431640 SPIRE1Q08AE8 756 aa14.22□□□□□ -0.13
DDX56-204ENST00000431640 ARHGAP29Q52LW3 1261 aa14.22□□□□□ -0.13
DDX56-204ENST00000431640 GPBP1Q86WP2 473 aa14.22□□□□□ -0.13
DDX56-204ENST00000431640 CATSPER3Q86XQ3 398 aa14.22□□□□□ -0.13
DDX56-204ENST00000431640 MNS1Q8NEH6 495 aa14.22□□□□□ -0.13
DDX56-204ENST00000431640 OTUD5Q96G74 571 aa14.22□□□□□ -0.13
DDX56-204ENST00000431640 PCMTD1Q96MG8 357 aaPredicted RBP14.22□□□□□ -0.13
DDX56-204ENST00000431640 CEP63Q96MT8 703 aa14.22□□□□□ -0.13
DDX56-204ENST00000431640 CSADQ9Y600 493 aa14.22□□□□□ -0.13
DDX56-204ENST00000431640 POTEB3A0JP26 581 aa14.22□□□□□ -0.13
DDX56-204ENST00000431640 FAM86B1E9PN63 330 aa14.22□□□□□ -0.13
DDX56-204ENST00000431640 RNF225M0QZC1 329 aaPredicted RBP14.22□□□□□ -0.13
DDX56-204ENST00000431640 OPLAHO14841 1288 aa14.22□□□□□ -0.13
DDX56-204ENST00000431640 MED24O75448 989 aa14.22□□□□□ -0.13
DDX56-204ENST00000431640 FAM86B2P0C5J1 330 aa14.22□□□□□ -0.13
DDX56-204ENST00000431640 MUTP22033 750 aa14.22□□□□□ -0.13
DDX56-204ENST00000431640 SLC12A3P55017 1021 aa14.22□□□□□ -0.13
DDX56-204ENST00000431640 ERVK-24P63145 666 aa14.22□□□□□ -0.13
DDX56-204ENST00000431640 TUBB4BP68371 445 aa14.22□□□□□ -0.13
DDX56-204ENST00000431640 CDK17Q00537 523 aa14.22□□□□□ -0.13
DDX56-204ENST00000431640 HERC4Q5GLZ8 1057 aaPredicted RBP14.22□□□□□ -0.13
DDX56-204ENST00000431640 MIIPQ5JXC2 388 aa14.22□□□□□ -0.13
DDX56-204ENST00000431640 NCAPH2Q6IBW4 605 aa14.22□□□□□ -0.13
DDX56-204ENST00000431640 POTEBQ6S5H4 581 aa14.22□□□□□ -0.13
DDX56-204ENST00000431640 PPP4R3CPQ6ZMV5 832 aa14.22□□□□□ -0.13
DDX56-204ENST00000431640 ARMC9Q7Z3E5 817 aa14.22□□□□□ -0.13
DDX56-204ENST00000431640 CCDC170Q8IYT3 715 aa14.22□□□□□ -0.13
DDX56-204ENST00000431640 SYT2Q8N9I0 419 aaPredicted RBP14.22□□□□□ -0.13
DDX56-204ENST00000431640 ZNF280CQ8ND82 737 aa14.22□□□□□ -0.13
DDX56-204ENST00000431640 HPS3Q969F9 1004 aa14.22□□□□□ -0.13
DDX56-204ENST00000431640 GJA10Q969M2 543 aa14.22□□□□□ -0.13
DDX56-204ENST00000431640 LENG9Q96B70 501 aa14.22□□□□□ -0.13
DDX56-204ENST00000431640 OPTNQ96CV9 577 aa14.22□□□□□ -0.13
DDX56-204ENST00000431640 CCDC94Q9BW85 323 aaPredicted RBP14.22□□□□□ -0.13
DDX56-204ENST00000431640 EDEM3Q9BZQ6 932 aa14.22□□□□□ -0.13
DDX56-204ENST00000431640 NDST4Q9H3R1 872 aa14.22□□□□□ -0.13
DDX56-204ENST00000431640 MRPL44Q9H9J2 332 aaKnown RBP14.22□□□□□ -0.13
DDX56-204ENST00000431640 A0A0G2JMZ2 1700 aa14.21□□□□□ -0.13
DDX56-204ENST00000431640 FRMD3A2A2Y4 597 aa14.21□□□□□ -0.14
DDX56-204ENST00000431640 EFCAB8A8MWE9 144 aa14.21□□□□□ -0.14
DDX56-204ENST00000431640 IRF6O14896 467 aa14.21□□□□□ -0.14
DDX56-204ENST00000431640 MSH4O15457 936 aa14.21□□□□□ -0.14
DDX56-204ENST00000431640 NDUFA10O95299 355 aa14.21□□□□□ -0.14
DDX56-204ENST00000431640 CYP11B2P19099 503 aa14.21□□□□□ -0.14
DDX56-204ENST00000431640 VCAM1P19320 739 aa14.21□□□□□ -0.14
DDX56-204ENST00000431640 CYLC1P35663 651 aaPredicted RBP14.21□□□□□ -0.14
DDX56-204ENST00000431640 HMGCS2P54868 508 aa14.21□□□□□ -0.14
DDX56-204ENST00000431640 BACE1P56817 501 aa14.21□□□□□ -0.14
DDX56-204ENST00000431640 MOGSQ13724 837 aa14.21□□□□□ -0.14
DDX56-204ENST00000431640 MEA1Q16626 185 aa14.21□□□□□ -0.14
DDX56-204ENST00000431640 ZNF662Q6ZS27 426 aa14.21□□□□□ -0.14
DDX56-204ENST00000431640 UBXN4Q92575 508 aa14.21□□□□□ -0.14
DDX56-204ENST00000431640 KIFC2Q96AC6 838 aa14.21□□□□□ -0.14
DDX56-204ENST00000431640 P2RX7Q99572 595 aaKnown RBP14.21□□□□□ -0.14
DDX56-204ENST00000431640 FEZ1Q99689 392 aa14.21□□□□□ -0.14
DDX56-204ENST00000431640 TTYH3Q9C0H2 523 aa14.21□□□□□ -0.14
DDX56-204ENST00000431640 TUFT1Q9NNX1 390 aa14.21□□□□□ -0.14
DDX56-204ENST00000431640 LZTFL1Q9NQ48 299 aa14.21□□□□□ -0.14
DDX56-204ENST00000431640 PNMA2Q9UL42 364 aa14.21□□□□□ -0.14
DDX56-204ENST00000431640 CFBP00751 764 aa14.2□□□□□ -0.14
DDX56-204ENST00000431640 TAL1P17542 331 aaPredicted RBP14.2□□□□□ -0.14
DDX56-204ENST00000431640 HOXA13P31271 388 aaPredicted RBP14.2□□□□□ -0.14
DDX56-204ENST00000431640 FKBP1BP68106 108 aa14.2□□□□□ -0.14
DDX56-204ENST00000431640 SAMD3Q8N6K7 520 aa14.2□□□□□ -0.14
DDX56-204ENST00000431640 SMC1BQ8NDV3 1235 aa14.2□□□□□ -0.14
DDX56-204ENST00000431640 RBM46Q8TBY0 533 aaKnown RBP14.2□□□□□ -0.14
DDX56-204ENST00000431640 WDR24Q96S15 920 aa14.2□□□□□ -0.14
DDX56-204ENST00000431640 HAUS4Q9H6D7 363 aa14.2□□□□□ -0.14
DDX56-204ENST00000431640 FBXO28Q9NVF7 368 aa14.2□□□□□ -0.14
DDX56-204ENST00000431640 PCDHA2Q9Y5H9 948 aa14.2□□□□□ -0.14
DDX56-204ENST00000431640 COL4A3BPQ9Y5P4 624 aa14.2□□□□□ -0.14
DDX56-204ENST00000431640 TOMM70O94826 608 aa14.19□□□□□ -0.14
DDX56-204ENST00000431640 IPO7O95373 1038 aaKnown RBP14.19□□□□□ -0.14
DDX56-204ENST00000431640 SPATA31C1P0DKV0 1188 aa14.19□□□□□ -0.14
DDX56-204ENST00000431640 STAT3P40763 770 aa14.19□□□□□ -0.14
DDX56-204ENST00000431640 LRRC41Q15345 812 aa14.19□□□□□ -0.14
DDX56-204ENST00000431640 ZCWPW2Q504Y3 356 aa14.19□□□□□ -0.14
DDX56-204ENST00000431640 CCDC174Q6PII3 467 aa14.19□□□□□ -0.14
DDX56-204ENST00000431640 LRRC55Q6ZSA7 311 aa14.19□□□□□ -0.14
DDX56-204ENST00000431640 ERO1BQ86YB8 467 aa14.19□□□□□ -0.14
DDX56-204ENST00000431640 LPAR1Q92633 364 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms