RNA–Protein interactions for RNA: ENST00000431183.6

SMPD4-205, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-205ENST00000431183 USP11P51784 963 aa12.53□□□□□ -0.4
SMPD4-205ENST00000431183 MRPS9P82933 396 aaKnown RBP12.53□□□□□ -0.4
SMPD4-205ENST00000431183 CATSPERGQ6ZRH7 1159 aa12.53□□□□□ -0.4
SMPD4-205ENST00000431183 FBXO16Q8IX29 292 aaPredicted RBP12.53□□□□□ -0.4
SMPD4-205ENST00000431183 CLEC4DQ8WXI8 215 aa12.53□□□□□ -0.4
SMPD4-205ENST00000431183 COPS5Q92905 334 aa12.53□□□□□ -0.4
SMPD4-205ENST00000431183 FAM84AQ96KN4 292 aa12.53□□□□□ -0.4
SMPD4-205ENST00000431183 DESI2Q9BSY9 194 aa12.53□□□□□ -0.4
SMPD4-205ENST00000431183 GLT8D2Q9H1C3 349 aa12.53□□□□□ -0.4
SMPD4-205ENST00000431183 MLXIPQ9HAP2 919 aa12.53□□□□□ -0.4
SMPD4-205ENST00000431183 GABBR1Q9UBS5 961 aa12.53□□□□□ -0.4
SMPD4-205ENST00000431183 SEPT9Q9UHD8 586 aaPredicted RBP12.53□□□□□ -0.4
SMPD4-205ENST00000431183 TUBE1Q9UJT0 475 aa12.53□□□□□ -0.4
SMPD4-205ENST00000431183 B4DLN1 442 aa12.53□□□□□ -0.4
SMPD4-205ENST00000431183 TKFCQ3LXA3 575 aa12.53□□□□□ -0.4
SMPD4-205ENST00000431183 FAM26FQ5R3K3 315 aa12.53□□□□□ -0.4
SMPD4-205ENST00000431183 PPFIBP1Q86W92 1011 aa12.53□□□□□ -0.4
SMPD4-205ENST00000431183 GSDMAQ96QA5 445 aa12.53□□□□□ -0.4
SMPD4-205ENST00000431183 PDCD2LQ9BRP1 358 aa12.53□□□□□ -0.4
SMPD4-205ENST00000431183 FAM207AQ9NSI2 230 aaPredicted RBP12.53□□□□□ -0.4
SMPD4-205ENST00000431183 RMND1Q9NWS8 449 aa12.53□□□□□ -0.4
SMPD4-205ENST00000431183 CDK5RAP2Q96SN8 1893 aa12.53□□□□□ -0.4
SMPD4-205ENST00000431183 GCFC2P16383 781 aaKnown RBP12.52□□□□□ -0.4
SMPD4-205ENST00000431183 LY6KQ17RY6 165 aa12.52□□□□□ -0.4
SMPD4-205ENST00000431183 ODR4Q5SWX8 454 aa12.52□□□□□ -0.4
SMPD4-205ENST00000431183 BTNL9Q6UXG8 535 aa12.52□□□□□ -0.4
SMPD4-205ENST00000431183 MTMR8Q96EF0 704 aa12.52□□□□□ -0.4
SMPD4-205ENST00000431183 GPBP1L1Q9HC44 474 aaPredicted RBP12.52□□□□□ -0.4
SMPD4-205ENST00000431183 TMEM51Q9NW97 253 aa12.52□□□□□ -0.4
SMPD4-205ENST00000431183 MYH8P13535 1937 aa12.52□□□□□ -0.4
SMPD4-205ENST00000431183 MYH4Q9Y623 1939 aa12.52□□□□□ -0.4
SMPD4-205ENST00000431183 C19orf81C9J6K1 198 aa12.52□□□□□ -0.4
SMPD4-205ENST00000431183 NOP56O00567 594 aaKnown RBP12.52□□□□□ -0.4
SMPD4-205ENST00000431183 CSDE1O75534 798 aaKnown RBP12.52□□□□□ -0.4
SMPD4-205ENST00000431183 CLK2P49760 499 aaKnown RBP12.52□□□□□ -0.4
SMPD4-205ENST00000431183 NCAPHQ15003 741 aa12.52□□□□□ -0.4
SMPD4-205ENST00000431183 ANKRD40Q6AI12 368 aa12.52□□□□□ -0.4
SMPD4-205ENST00000431183 PPP4R3AQ6IN85 833 aa12.52□□□□□ -0.4
SMPD4-205ENST00000431183 USP50Q70EL3 339 aaPredicted RBP12.52□□□□□ -0.4
SMPD4-205ENST00000431183 PNMA8AQ86V59 439 aaPredicted RBP12.52□□□□□ -0.4
SMPD4-205ENST00000431183 IGSF22Q8N9C0 903 aa12.52□□□□□ -0.4
SMPD4-205ENST00000431183 MED15Q96RN5 788 aa12.52□□□□□ -0.4
SMPD4-205ENST00000431183 REEP2Q9BRK0 252 aa12.52□□□□□ -0.4
SMPD4-205ENST00000431183 MOV10L1Q9BXT6 1211 aaKnown RBP12.52□□□□□ -0.4
SMPD4-205ENST00000431183 SPATC1LQ9H0A9 340 aa12.52□□□□□ -0.4
SMPD4-205ENST00000431183 ZNF214Q9UL59 606 aaPredicted RBP12.52□□□□□ -0.4
SMPD4-205ENST00000431183 PDHXO00330 501 aa12.52□□□□□ -0.41
SMPD4-205ENST00000431183 LAD1O00515 517 aa12.52□□□□□ -0.41
SMPD4-205ENST00000431183 RIOK3O14730 519 aaKnown RBP12.52□□□□□ -0.41
SMPD4-205ENST00000431183 DNA2P51530 1060 aa12.52□□□□□ -0.41
SMPD4-205ENST00000431183 PGM5Q15124 567 aa12.52□□□□□ -0.41
SMPD4-205ENST00000431183 RBM43Q6ZSC3 357 aaKnown RBP12.52□□□□□ -0.41
SMPD4-205ENST00000431183 NSUN6Q8TEA1 469 aaKnown RBP12.52□□□□□ -0.41
SMPD4-205ENST00000431183 FAM212AQ96EL1 285 aa12.52□□□□□ -0.41
SMPD4-205ENST00000431183 MXRA8Q9BRK3 442 aa12.52□□□□□ -0.41
SMPD4-205ENST00000431183 WRAP73Q9P2S5 460 aaPredicted RBP12.52□□□□□ -0.41
SMPD4-205ENST00000431183 LTBP1Q14766 1721 aa12.52□□□□□ -0.41
SMPD4-205ENST00000431183 KCNJ18B7U540 433 aa12.51□□□□□ -0.41
SMPD4-205ENST00000431183 TISP43B9A030 160 aa12.51□□□□□ -0.41
SMPD4-205ENST00000431183 KLK7P49862 253 aa12.51□□□□□ -0.41
SMPD4-205ENST00000431183 APBA1Q02410 837 aa12.51□□□□□ -0.41
SMPD4-205ENST00000431183 TRAF1Q13077 416 aa12.51□□□□□ -0.41
SMPD4-205ENST00000431183 KCNJ12Q14500 433 aa12.51□□□□□ -0.41
SMPD4-205ENST00000431183 PRAMEF19Q5SWL8 479 aa12.51□□□□□ -0.41
SMPD4-205ENST00000431183 AK8Q96MA6 479 aa12.51□□□□□ -0.41
SMPD4-205ENST00000431183 SCLT1Q96NL6 688 aa12.51□□□□□ -0.41
SMPD4-205ENST00000431183 CCSER1Q9C0I3 900 aa12.51□□□□□ -0.41
SMPD4-205ENST00000431183 GOLGA8IPA6NC78 632 aa12.51□□□□□ -0.41
SMPD4-205ENST00000431183 GOLGA8JA6NMD2 632 aa12.51□□□□□ -0.41
SMPD4-205ENST00000431183 PPP1R3GB7ZBB8 358 aa12.51□□□□□ -0.41
SMPD4-205ENST00000431183 CASP5P51878 434 aa12.51□□□□□ -0.41
SMPD4-205ENST00000431183 COASYQ13057 564 aa12.51□□□□□ -0.41
SMPD4-205ENST00000431183 ITGB3BPQ13352 177 aaPredicted RBP12.51□□□□□ -0.41
SMPD4-205ENST00000431183 CCDC65Q8IXS2 484 aa12.51□□□□□ -0.41
SMPD4-205ENST00000431183 METTL13Q8N6R0 699 aa12.51□□□□□ -0.41
SMPD4-205ENST00000431183 CEP170P1Q96L14 293 aa12.51□□□□□ -0.41
SMPD4-205ENST00000431183 NLRC4Q9NPP4 1024 aa12.51□□□□□ -0.41
SMPD4-205ENST00000431183 PXMP2Q9NR77 195 aa12.51□□□□□ -0.41
SMPD4-205ENST00000431183 LAMA2P24043 3122 aaKnown RBP12.51□□□□□ -0.41
SMPD4-205ENST00000431183 MYBP10242 640 aa12.51□□□□□ -0.41
SMPD4-205ENST00000431183 GJA5P36382 358 aa12.51□□□□□ -0.41
SMPD4-205ENST00000431183 ZNF658Q5TYW1 1059 aaPredicted RBP12.51□□□□□ -0.41
SMPD4-205ENST00000431183 CDR2LQ86X02 465 aaPredicted RBP12.51□□□□□ -0.41
SMPD4-205ENST00000431183 LENG9Q96B70 501 aa12.51□□□□□ -0.41
SMPD4-205ENST00000431183 BICD1Q96G01 975 aa12.51□□□□□ -0.41
SMPD4-205ENST00000431183 TRIM21P19474 475 aaKnown RBP12.5□□□□□ -0.41
SMPD4-205ENST00000431183 CNGA1P29973 690 aa12.5□□□□□ -0.41
SMPD4-205ENST00000431183 NOC4LQ9BVI4 516 aaKnown RBP12.5□□□□□ -0.41
SMPD4-205ENST00000431183 PDGFCQ9NRA1 345 aa12.5□□□□□ -0.41
SMPD4-205ENST00000431183 CYP2B6P20813 491 aa12.5□□□□□ -0.41
SMPD4-205ENST00000431183 PEX3P56589 373 aa12.5□□□□□ -0.41
SMPD4-205ENST00000431183 SNAPC2Q13487 334 aa12.5□□□□□ -0.41
SMPD4-205ENST00000431183 UGCGQ16739 394 aa12.5□□□□□ -0.41
SMPD4-205ENST00000431183 CCAR2Q8N163 923 aaKnown RBP12.5□□□□□ -0.41
SMPD4-205ENST00000431183 ETNPPLQ8TBG4 499 aa12.5□□□□□ -0.41
SMPD4-205ENST00000431183 PRPHP41219 470 aa12.5□□□□□ -0.41
SMPD4-205ENST00000431183 NT5C2P49902 561 aa12.5□□□□□ -0.41
SMPD4-205ENST00000431183 TBC1D8BQ0IIM8 1120 aa12.5□□□□□ -0.41
SMPD4-205ENST00000431183 CNNM4Q6P4Q7 775 aa12.5□□□□□ -0.41
SMPD4-205ENST00000431183 OTOP1Q7RTM1 612 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms