RNA–Protein interactions for RNA: ENST00000430682.5

SMPD4-204, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 820 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-204ENST00000430682 NKX2-4Q9H2Z4 354 aa14.33□□□□□ -0.12
SMPD4-204ENST00000430682 KCNH7Q9NS40 1196 aa14.33□□□□□ -0.12
SMPD4-204ENST00000430682 SETD4Q9NVD3 440 aa14.33□□□□□ -0.12
SMPD4-204ENST00000430682 SLC4A7Q9Y6M7 1214 aa14.33□□□□□ -0.12
SMPD4-204ENST00000430682 XIRP2A4UGR9 3374 aa14.33□□□□□ -0.12
SMPD4-204ENST00000430682 PRRC2BQ5JSZ5 2229 aaKnown RBP14.32□□□□□ -0.12
SMPD4-204ENST00000430682 PSMA5P28066 241 aa14.32□□□□□ -0.12
SMPD4-204ENST00000430682 RFC2P35250 354 aa14.32□□□□□ -0.12
SMPD4-204ENST00000430682 SREBF1P36956 1147 aa14.32□□□□□ -0.12
SMPD4-204ENST00000430682 ITGB3BPQ13352 177 aaPredicted RBP14.32□□□□□ -0.12
SMPD4-204ENST00000430682 MTMR1Q13613 665 aa14.32□□□□□ -0.12
SMPD4-204ENST00000430682 ERICH6BQ5W0A0 696 aa14.32□□□□□ -0.12
SMPD4-204ENST00000430682 RASGRP4Q8TDF6 673 aa14.32□□□□□ -0.12
SMPD4-204ENST00000430682 TM6SF1Q9BZW5 370 aa14.32□□□□□ -0.12
SMPD4-204ENST00000430682 FTOQ9C0B1 505 aaKnown RBP eCLIP14.32□□□□□ -0.12
SMPD4-204ENST00000430682 TMEM265A0A087WTH1 108 aa14.31□□□□□ -0.12
SMPD4-204ENST00000430682 C17orf102A2RUQ5 167 aa14.31□□□□□ -0.12
SMPD4-204ENST00000430682 FAM86B1E9PN63 330 aa14.31□□□□□ -0.12
SMPD4-204ENST00000430682 hCG_1984214I3L0E3 225 aa14.31□□□□□ -0.12
SMPD4-204ENST00000430682 MEIS1O00470 390 aa14.31□□□□□ -0.12
SMPD4-204ENST00000430682 CXCL10P02778 98 aa14.31□□□□□ -0.12
SMPD4-204ENST00000430682 PFKMP08237 780 aa14.31□□□□□ -0.12
SMPD4-204ENST00000430682 FAM86B2P0C5J1 330 aa14.31□□□□□ -0.12
SMPD4-204ENST00000430682 IFNAR1P17181 557 aa14.31□□□□□ -0.12
SMPD4-204ENST00000430682 SPRED2Q7Z698 418 aa14.31□□□□□ -0.12
SMPD4-204ENST00000430682 ZNF713Q8N859 430 aaPredicted RBP14.31□□□□□ -0.12
SMPD4-204ENST00000430682 LMBR1Q8WVP7 490 aa14.31□□□□□ -0.12
SMPD4-204ENST00000430682 ATP6V0A1Q93050 837 aa14.31□□□□□ -0.12
SMPD4-204ENST00000430682 ZBTB10Q96DT7 871 aa14.31□□□□□ -0.12
SMPD4-204ENST00000430682 SLC26A6Q9BXS9 759 aa14.31□□□□□ -0.12
SMPD4-204ENST00000430682 ZMYND12Q9H0C1 365 aa14.31□□□□□ -0.12
SMPD4-204ENST00000430682 CYP46A1Q9Y6A2 500 aa14.31□□□□□ -0.12
SMPD4-204ENST00000430682 IGLV3-22A0A075B6J6 115 aa14.3□□□□□ -0.12
SMPD4-204ENST00000430682 CCDC196A0A1B0GTZ2 297 aa14.3□□□□□ -0.12
SMPD4-204ENST00000430682 SEC24BO95487 1268 aa14.3□□□□□ -0.12
SMPD4-204ENST00000430682 FOSP01100 380 aaPredicted RBP14.3□□□□□ -0.12
SMPD4-204ENST00000430682 ATP2A2P16615 1042 aaKnown RBP14.3□□□□□ -0.12
SMPD4-204ENST00000430682 DEFB103AP81534 67 aa14.3□□□□□ -0.12
SMPD4-204ENST00000430682 ARHGAP4P98171 946 aa14.3□□□□□ -0.12
SMPD4-204ENST00000430682 ADGRE1Q14246 886 aa14.3□□□□□ -0.12
SMPD4-204ENST00000430682 CEP55Q53EZ4 464 aa14.3□□□□□ -0.12
SMPD4-204ENST00000430682 CCDC155Q8N6L0 562 aa14.3□□□□□ -0.12
SMPD4-204ENST00000430682 GIMAP8Q8ND71 665 aaPredicted RBP14.3□□□□□ -0.12
SMPD4-204ENST00000430682 SLC17A8Q8NDX2 589 aa14.3□□□□□ -0.12
SMPD4-204ENST00000430682 SEPT1Q8WYJ6 367 aa14.3□□□□□ -0.12
SMPD4-204ENST00000430682 AIFM3Q96NN9 605 aa14.3□□□□□ -0.12
SMPD4-204ENST00000430682 PRDM12Q9H4Q4 367 aa14.3□□□□□ -0.12
SMPD4-204ENST00000430682 AGO4Q9HCK5 861 aaKnown RBP14.3□□□□□ -0.12
SMPD4-204ENST00000430682 VPS54Q9P1Q0 977 aa14.3□□□□□ -0.12
SMPD4-204ENST00000430682 ESYT2A0FGR8 921 aa14.29□□□□□ -0.12
SMPD4-204ENST00000430682 MAFGO15525 162 aa14.29□□□□□ -0.12
SMPD4-204ENST00000430682 DHX15O43143 795 aaKnown RBP14.29□□□□□ -0.12
SMPD4-204ENST00000430682 LGR5O75473 907 aa14.29□□□□□ -0.12
SMPD4-204ENST00000430682 CCNE2O96020 404 aa14.29□□□□□ -0.12
SMPD4-204ENST00000430682 MARK3P27448 753 aa14.29□□□□□ -0.12
SMPD4-204ENST00000430682 THPOP40225 353 aa14.29□□□□□ -0.12
SMPD4-204ENST00000430682 WDR5P61964 334 aaKnown RBP14.29□□□□□ -0.12
SMPD4-204ENST00000430682 STK3Q13188 491 aa14.29□□□□□ -0.12
SMPD4-204ENST00000430682 AP3B2Q13367 1082 aa14.29□□□□□ -0.12
SMPD4-204ENST00000430682 RUFY4Q6ZNE9 571 aa14.29□□□□□ -0.12
SMPD4-204ENST00000430682 USP38Q8NB14 1042 aa14.29□□□□□ -0.12
SMPD4-204ENST00000430682 CDHR1Q96JP9 859 aa14.29□□□□□ -0.12
SMPD4-204ENST00000430682 RNF26Q9BY78 433 aaPredicted RBP14.29□□□□□ -0.12
SMPD4-204ENST00000430682 MTIF3Q9H2K0 278 aaKnown RBP14.29□□□□□ -0.12
SMPD4-204ENST00000430682 PCDHA11Q9Y5I1 949 aa14.29□□□□□ -0.12
SMPD4-204ENST00000430682 NFASCO94856 1347 aa14.28□□□□□ -0.12
SMPD4-204ENST00000430682 CYP3A4P08684 503 aa14.28□□□□□ -0.12
SMPD4-204ENST00000430682 CTSHP09668 335 aa14.28□□□□□ -0.12
SMPD4-204ENST00000430682 FOSL2P15408 326 aa14.28□□□□□ -0.12
SMPD4-204ENST00000430682 COL4A4P53420 1690 aaPredicted RBP14.28□□□□□ -0.12
SMPD4-204ENST00000430682 ACTR2P61160 394 aa14.28□□□□□ -0.12
SMPD4-204ENST00000430682 MKRN4PQ13434 485 aaPredicted RBP14.28□□□□□ -0.12
SMPD4-204ENST00000430682 NPY5RQ15761 445 aa14.28□□□□□ -0.12
SMPD4-204ENST00000430682 RAB30Q15771 203 aa14.28□□□□□ -0.12
SMPD4-204ENST00000430682 MARCH8Q5T0T0 291 aa14.28□□□□□ -0.12
SMPD4-204ENST00000430682 HERC6Q8IVU3 1022 aa14.28□□□□□ -0.12
SMPD4-204ENST00000430682 MAFAQ8NHW3 353 aaPredicted RBP14.28□□□□□ -0.12
SMPD4-204ENST00000430682 ZNF274Q96GC6 653 aaPredicted RBP14.28□□□□□ -0.12
SMPD4-204ENST00000430682 EHMT1Q9H9B1 1298 aa14.28□□□□□ -0.12
SMPD4-204ENST00000430682 JPH1Q9HDC5 661 aaPredicted RBP14.28□□□□□ -0.12
SMPD4-204ENST00000430682 PDRG1Q9NUG6 133 aa14.28□□□□□ -0.12
SMPD4-204ENST00000430682 SLC9A2Q9UBY0 812 aa14.28□□□□□ -0.12
SMPD4-204ENST00000430682 MSRAQ9UJ68 235 aa14.28□□□□□ -0.12
SMPD4-204ENST00000430682 TTC28Q96AY4 2481 aa14.27□□□□□ -0.12
SMPD4-204ENST00000430682 NLRC5Q86WI3 1866 aa14.27□□□□□ -0.12
SMPD4-204ENST00000430682 LCHNA4D1U4 455 aa14.27□□□□□ -0.13
SMPD4-204ENST00000430682 RSPH10B2B2RC85 870 aa14.27□□□□□ -0.13
SMPD4-204ENST00000430682 DDX39AO00148 427 aaKnown RBP14.27□□□□□ -0.13
SMPD4-204ENST00000430682 RFXAPO00287 272 aa14.27□□□□□ -0.13
SMPD4-204ENST00000430682 ATG7O95352 703 aa14.27□□□□□ -0.13
SMPD4-204ENST00000430682 CA3P07451 260 aa14.27□□□□□ -0.13
SMPD4-204ENST00000430682 RSPH10BP0C881 870 aa14.27□□□□□ -0.13
SMPD4-204ENST00000430682 ACTN1P12814 892 aa14.27□□□□□ -0.13
SMPD4-204ENST00000430682 CNKSR3Q6P9H4 555 aa14.27□□□□□ -0.13
SMPD4-204ENST00000430682 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.27□□□□□ -0.13
SMPD4-204ENST00000430682 PLA2G4DQ86XP0 818 aa14.27□□□□□ -0.13
SMPD4-204ENST00000430682 TEX2Q8IWB9 1127 aa14.27□□□□□ -0.13
SMPD4-204ENST00000430682 REXO1Q8N1G1 1221 aaKnown RBP14.27□□□□□ -0.13
SMPD4-204ENST00000430682 DBF4BQ8NFT6 615 aa14.27□□□□□ -0.13
SMPD4-204ENST00000430682 TRAPPC12Q8WVT3 735 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms