RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 TAOK3Q9H2K8 898 aa9.66□□□□□ -0.86
CDC42BPA-206ENST00000429440 ABCF3Q9NUQ8 709 aa9.66□□□□□ -0.86
CDC42BPA-206ENST00000429440 IL1RAPL1Q9NZN1 696 aa9.66□□□□□ -0.86
CDC42BPA-206ENST00000429440 STK38LQ9Y2H1 464 aa9.66□□□□□ -0.86
CDC42BPA-206ENST00000429440 LUC7L2Q9Y383 392 aaKnown RBP9.66□□□□□ -0.86
CDC42BPA-206ENST00000429440 COL18A1P39060 1754 aa9.66□□□□□ -0.86
CDC42BPA-206ENST00000429440 CARMIL3Q8ND23 1372 aa9.65□□□□□ -0.86
CDC42BPA-206ENST00000429440 MYPNQ86TC9 1320 aa9.65□□□□□ -0.86
CDC42BPA-206ENST00000429440 A0A0G2JS52 829 aa9.65□□□□□ -0.86
CDC42BPA-206ENST00000429440 SIGLEC16A6NMB1 481 aa9.65□□□□□ -0.86
CDC42BPA-206ENST00000429440 NVLO15381 856 aaKnown RBP9.65□□□□□ -0.86
CDC42BPA-206ENST00000429440 AKR1B10O60218 316 aa9.65□□□□□ -0.86
CDC42BPA-206ENST00000429440 TBC1D12O60347 775 aa9.65□□□□□ -0.86
CDC42BPA-206ENST00000429440 SURF6O75683 361 aaKnown RBP9.65□□□□□ -0.86
CDC42BPA-206ENST00000429440 PTDSS1P48651 473 aaKnown RBP9.65□□□□□ -0.86
CDC42BPA-206ENST00000429440 ZNF844Q08AG5 666 aa9.65□□□□□ -0.86
CDC42BPA-206ENST00000429440 RCN1Q15293 331 aa9.65□□□□□ -0.86
CDC42BPA-206ENST00000429440 DIXDC1Q155Q3 683 aa9.65□□□□□ -0.86
CDC42BPA-206ENST00000429440 IMMTQ16891 758 aaKnown RBP9.65□□□□□ -0.86
CDC42BPA-206ENST00000429440 GRAMD4Q6IC98 578 aa9.65□□□□□ -0.86
CDC42BPA-206ENST00000429440 DQX1Q8TE96 717 aaKnown RBP9.65□□□□□ -0.86
CDC42BPA-206ENST00000429440 IFT81Q8WYA0 676 aa9.65□□□□□ -0.86
CDC42BPA-206ENST00000429440 GFM2Q969S9 779 aaKnown RBP9.65□□□□□ -0.86
CDC42BPA-206ENST00000429440 FAM114A2Q9NRY5 505 aa9.65□□□□□ -0.86
CDC42BPA-206ENST00000429440 ITM2BQ9Y287 266 aa9.65□□□□□ -0.86
CDC42BPA-206ENST00000429440 TBC1D30Q9Y2I9 924 aa9.65□□□□□ -0.86
CDC42BPA-206ENST00000429440 MED23Q9ULK4 1368 aa9.65□□□□□ -0.86
CDC42BPA-206ENST00000429440 CCDC162PA2VCL2 907 aa9.65□□□□□ -0.86
CDC42BPA-206ENST00000429440 PI4KAP2A4QPH2 592 aa9.65□□□□□ -0.86
CDC42BPA-206ENST00000429440 O00370 1275 aa9.65□□□□□ -0.86
CDC42BPA-206ENST00000429440 RNMTO43148 476 aaKnown RBP9.65□□□□□ -0.86
CDC42BPA-206ENST00000429440 TIMM44O43615 452 aa9.65□□□□□ -0.86
CDC42BPA-206ENST00000429440 ACTN4O43707 911 aaKnown RBP9.65□□□□□ -0.86
CDC42BPA-206ENST00000429440 GLI1P08151 1106 aa9.65□□□□□ -0.86
CDC42BPA-206ENST00000429440 MMEP08473 750 aa9.65□□□□□ -0.86
CDC42BPA-206ENST00000429440 UBTFL1P0CB47 393 aaPredicted RBP9.65□□□□□ -0.86
CDC42BPA-206ENST00000429440 POTEJP0CG39 1038 aa9.65□□□□□ -0.86
CDC42BPA-206ENST00000429440 PROSER3Q2NL68 480 aa9.65□□□□□ -0.86
CDC42BPA-206ENST00000429440 LONRF3Q496Y0 759 aa9.65□□□□□ -0.86
CDC42BPA-206ENST00000429440 LIN52Q52LA3 116 aa9.65□□□□□ -0.86
CDC42BPA-206ENST00000429440 ZNF394Q53GI3 561 aa9.65□□□□□ -0.86
CDC42BPA-206ENST00000429440 WASHC2DQ5SRD0 308 aa9.65□□□□□ -0.86
CDC42BPA-206ENST00000429440 TCERG1LQ5VWI1 586 aa9.65□□□□□ -0.86
CDC42BPA-206ENST00000429440 SHC4Q6S5L8 630 aa9.65□□□□□ -0.86
CDC42BPA-206ENST00000429440 PACS1Q6VY07 963 aa9.65□□□□□ -0.86
CDC42BPA-206ENST00000429440 PI4KAP1Q8N8J0 262 aa9.65□□□□□ -0.86
CDC42BPA-206ENST00000429440 RNF25Q96BH1 459 aaPredicted RBP9.65□□□□□ -0.86
CDC42BPA-206ENST00000429440 AGBL1Q96MI9 1066 aa9.65□□□□□ -0.86
CDC42BPA-206ENST00000429440 ZMAT2Q96NC0 199 aaKnown RBP9.65□□□□□ -0.86
CDC42BPA-206ENST00000429440 NUP88Q99567 741 aaPredicted RBP9.65□□□□□ -0.86
CDC42BPA-206ENST00000429440 CHP1Q99653 195 aa9.65□□□□□ -0.86
CDC42BPA-206ENST00000429440 CGREF1Q99674 301 aa9.65□□□□□ -0.86
CDC42BPA-206ENST00000429440 HNRNPABQ99729 332 aaKnown RBP9.65□□□□□ -0.86
CDC42BPA-206ENST00000429440 EPB41L5Q9HCM4 733 aa9.65□□□□□ -0.86
CDC42BPA-206ENST00000429440 UBAP1Q9NZ09 502 aa9.65□□□□□ -0.86
CDC42BPA-206ENST00000429440 RABL2BQ9UNT1 228 aa9.65□□□□□ -0.86
CDC42BPA-206ENST00000429440 HYOU1Q9Y4L1 999 aa9.65□□□□□ -0.86
CDC42BPA-206ENST00000429440 PRAMEF22A3QJZ6 481 aa9.64□□□□□ -0.87
CDC42BPA-206ENST00000429440 OAS1P00973 400 aaKnown RBP9.64□□□□□ -0.87
CDC42BPA-206ENST00000429440 CPA3P15088 417 aa9.64□□□□□ -0.87
CDC42BPA-206ENST00000429440 TCF7P36402 384 aaPredicted RBP9.64□□□□□ -0.87
CDC42BPA-206ENST00000429440 HSD17B3P37058 310 aa9.64□□□□□ -0.87
CDC42BPA-206ENST00000429440 VHLP40337 213 aa9.64□□□□□ -0.87
CDC42BPA-206ENST00000429440 ACADVLP49748 655 aa9.64□□□□□ -0.87
CDC42BPA-206ENST00000429440 CCT8P50990 548 aa9.64□□□□□ -0.87
CDC42BPA-206ENST00000429440 ADARP55265 1226 aaKnown RBP9.64□□□□□ -0.87
CDC42BPA-206ENST00000429440 MTMR3Q13615 1198 aa9.64□□□□□ -0.87
CDC42BPA-206ENST00000429440 ITGA7Q13683 1181 aa9.64□□□□□ -0.87
CDC42BPA-206ENST00000429440 CCDC153Q494R4 210 aa9.64□□□□□ -0.87
CDC42BPA-206ENST00000429440 SYDE2Q5VT97 1194 aa9.64□□□□□ -0.87
CDC42BPA-206ENST00000429440 OTUD6AQ7L8S5 288 aa9.64□□□□□ -0.87
CDC42BPA-206ENST00000429440 PPP1R42Q7Z4L9 355 aa9.64□□□□□ -0.87
CDC42BPA-206ENST00000429440 DZIP1Q86YF9 867 aaKnown RBP9.64□□□□□ -0.87
CDC42BPA-206ENST00000429440 TRMT44Q8IYL2 757 aaKnown RBP9.64□□□□□ -0.87
CDC42BPA-206ENST00000429440 KRI1Q8N9T8 703 aaKnown RBP9.64□□□□□ -0.87
CDC42BPA-206ENST00000429440 TLCD1Q96CP7 247 aa9.64□□□□□ -0.87
CDC42BPA-206ENST00000429440 GPATCH3Q96I76 525 aa9.64□□□□□ -0.87
CDC42BPA-206ENST00000429440 AGXT2Q9BYV1 514 aa9.64□□□□□ -0.87
CDC42BPA-206ENST00000429440 PPP1R12CQ9BZL4 782 aa9.64□□□□□ -0.87
CDC42BPA-206ENST00000429440 RETREG1Q9H6L5 497 aa9.64□□□□□ -0.87
CDC42BPA-206ENST00000429440 ECHDC1Q9NTX5 307 aa9.64□□□□□ -0.87
CDC42BPA-206ENST00000429440 KIAA1522Q9P206 1035 aaPredicted RBP9.64□□□□□ -0.87
CDC42BPA-206ENST00000429440 STOML1Q9UBI4 398 aa9.64□□□□□ -0.87
CDC42BPA-206ENST00000429440 TAF6LQ9Y6J9 622 aa9.64□□□□□ -0.87
CDC42BPA-206ENST00000429440 SCN11AQ9UI33 1791 aa9.64□□□□□ -0.87
CDC42BPA-206ENST00000429440 RFX7Q2KHR2 1363 aa9.64□□□□□ -0.87
CDC42BPA-206ENST00000429440 C5P01031 1676 aa9.64□□□□□ -0.87
CDC42BPA-206ENST00000429440 BTBD11A6QL63 1104 aa9.64□□□□□ -0.87
CDC42BPA-206ENST00000429440 SNX3O60493 162 aa9.64□□□□□ -0.87
CDC42BPA-206ENST00000429440 HEXIM1O94992 359 aaKnown RBP9.64□□□□□ -0.87
CDC42BPA-206ENST00000429440 CLCN2P51788 898 aa9.64□□□□□ -0.87
CDC42BPA-206ENST00000429440 NMIQ13287 307 aaPredicted RBP9.64□□□□□ -0.87
CDC42BPA-206ENST00000429440 SPIDRQ14159 915 aa9.64□□□□□ -0.87
CDC42BPA-206ENST00000429440 RCN2Q14257 317 aa9.64□□□□□ -0.87
CDC42BPA-206ENST00000429440 MAP7D3Q8IWC1 876 aa9.64□□□□□ -0.87
CDC42BPA-206ENST00000429440 RBM46Q8TBY0 533 aaKnown RBP9.64□□□□□ -0.87
CDC42BPA-206ENST00000429440 DIS3LQ8TF46 1054 aaKnown RBP9.64□□□□□ -0.87
CDC42BPA-206ENST00000429440 DNAJC7Q99615 494 aa9.64□□□□□ -0.87
CDC42BPA-206ENST00000429440 ELAC2Q9BQ52 826 aaKnown RBP9.64□□□□□ -0.87
CDC42BPA-206ENST00000429440 ETNK2Q9NVF9 386 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms