RNA–Protein interactions for RNA: ENST00000429344.6

CACTIN-203, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-203ENST00000429344 USP17L10C9JJH3 530 aa16.41■□□□□ 0.22
CACTIN-203ENST00000429344 CEP104O60308 925 aa16.41■□□□□ 0.22
CACTIN-203ENST00000429344 MMS22LQ6ZRQ5 1243 aa16.41■□□□□ 0.22
CACTIN-203ENST00000429344 DEFB132Q7Z7B7 95 aa16.41■□□□□ 0.22
CACTIN-203ENST00000429344 C4orf32Q8N8J7 132 aa16.41■□□□□ 0.22
CACTIN-203ENST00000429344 KIAA0895Q8NCT3 520 aa16.41■□□□□ 0.22
CACTIN-203ENST00000429344 RNPC3Q96LT9 517 aaKnown RBP16.41■□□□□ 0.22
CACTIN-203ENST00000429344 SH3GLB2Q9NR46 395 aa16.41■□□□□ 0.22
CACTIN-203ENST00000429344 SWAP70Q9UH65 585 aa16.41■□□□□ 0.22
CACTIN-203ENST00000429344 RPS6KA5O75582 802 aa16.41■□□□□ 0.22
CACTIN-203ENST00000429344 MIIPQ5JXC2 388 aa16.41■□□□□ 0.22
CACTIN-203ENST00000429344 NAA35Q5VZE5 725 aa16.41■□□□□ 0.22
CACTIN-203ENST00000429344 GALNT17Q6IS24 598 aa16.41■□□□□ 0.22
CACTIN-203ENST00000429344 FAM133AQ8N9E0 248 aa16.41■□□□□ 0.22
CACTIN-203ENST00000429344 UBLCP1Q8WVY7 318 aaPredicted RBP16.41■□□□□ 0.22
CACTIN-203ENST00000429344 TSG101Q99816 390 aa16.41■□□□□ 0.22
CACTIN-203ENST00000429344 JPH2Q9BR39 696 aaPredicted RBP16.41■□□□□ 0.22
CACTIN-203ENST00000429344 KBTBD4Q9NVX7 518 aa16.41■□□□□ 0.22
CACTIN-203ENST00000429344 SCAF8Q9UPN6 1271 aaKnown RBP16.41■□□□□ 0.22
CACTIN-203ENST00000429344 MYH13Q9UKX3 1938 aa16.41■□□□□ 0.22
CACTIN-203ENST00000429344 MEA1Q16626 185 aa16.4■□□□□ 0.22
CACTIN-203ENST00000429344 PSTPIP2Q9H939 334 aa16.4■□□□□ 0.22
CACTIN-203ENST00000429344 PI4KBQ9UBF8 816 aa16.4■□□□□ 0.22
CACTIN-203ENST00000429344 HDAC9Q9UKV0 1011 aa16.4■□□□□ 0.22
CACTIN-203ENST00000429344 PCDHA1Q9Y5I3 950 aa16.4■□□□□ 0.22
CACTIN-203ENST00000429344 SRCAPQ6ZRS2 3230 aa16.4■□□□□ 0.22
CACTIN-203ENST00000429344 DLGAP5Q15398 846 aa16.4■□□□□ 0.22
CACTIN-203ENST00000429344 CEP57Q86XR8 500 aa16.4■□□□□ 0.22
CACTIN-203ENST00000429344 SPZ1Q9BXG8 430 aa16.4■□□□□ 0.22
CACTIN-203ENST00000429344 ZNF277Q9NRM2 450 aaPredicted RBP16.4■□□□□ 0.22
CACTIN-203ENST00000429344 MYCNP04198 464 aaPredicted RBP16.4■□□□□ 0.22
CACTIN-203ENST00000429344 EEF2P13639 858 aaKnown RBP16.4■□□□□ 0.22
CACTIN-203ENST00000429344 KCNB1Q14721 858 aa16.4■□□□□ 0.22
CACTIN-203ENST00000429344 ABCB5Q2M3G0 1257 aa16.4■□□□□ 0.22
CACTIN-203ENST00000429344 KRT79Q5XKE5 535 aa16.4■□□□□ 0.22
CACTIN-203ENST00000429344 ZBTB12Q9Y330 459 aaPredicted RBP16.4■□□□□ 0.22
CACTIN-203ENST00000429344 GAKO14976 1311 aa16.39■□□□□ 0.22
CACTIN-203ENST00000429344 MYMKA6NI61 221 aa16.39■□□□□ 0.21
CACTIN-203ENST00000429344 SLC15A2Q16348 729 aa16.39■□□□□ 0.21
CACTIN-203ENST00000429344 SLC9C1Q4G0N8 1177 aa16.39■□□□□ 0.21
CACTIN-203ENST00000429344 RETREG2Q8NC44 543 aa16.39■□□□□ 0.21
CACTIN-203ENST00000429344 CUL5Q93034 780 aa16.39■□□□□ 0.21
CACTIN-203ENST00000429344 FAM163AQ96GL9 167 aaPredicted RBP16.39■□□□□ 0.21
CACTIN-203ENST00000429344 PACSIN1Q9BY11 444 aa16.39■□□□□ 0.21
CACTIN-203ENST00000429344 GOPCQ9HD26 462 aa16.39■□□□□ 0.21
CACTIN-203ENST00000429344 ZC3H4Q9UPT8 1303 aaKnown RBP16.39■□□□□ 0.21
CACTIN-203ENST00000429344 ADGRF4Q8IZF3 695 aa16.39■□□□□ 0.21
CACTIN-203ENST00000429344 SEPT11Q9NVA2 429 aaKnown RBP16.39■□□□□ 0.21
CACTIN-203ENST00000429344 WNK3Q9BYP7 1800 aa16.39■□□□□ 0.21
CACTIN-203ENST00000429344 TDP2O95551 362 aa16.39■□□□□ 0.21
CACTIN-203ENST00000429344 GH2P01242 217 aa16.39■□□□□ 0.21
CACTIN-203ENST00000429344 NR1D1P20393 614 aa16.39■□□□□ 0.21
CACTIN-203ENST00000429344 HNRNPH1P31943 449 aaKnown RBP16.39■□□□□ 0.21
CACTIN-203ENST00000429344 RDXP35241 583 aaKnown RBP16.39■□□□□ 0.21
CACTIN-203ENST00000429344 SFMBT2Q5VUG0 894 aa16.39■□□□□ 0.21
CACTIN-203ENST00000429344 APOBEC3HQ6NTF7 200 aaKnown RBP16.39■□□□□ 0.21
CACTIN-203ENST00000429344 TRMT1LQ7Z2T5 733 aaKnown RBP16.39■□□□□ 0.21
CACTIN-203ENST00000429344 SPAG5Q96R06 1193 aa16.39■□□□□ 0.21
CACTIN-203ENST00000429344 PLAGL2Q9UPG8 496 aa16.39■□□□□ 0.21
CACTIN-203ENST00000429344 GOLGA6L7A0A1B0GV03 622 aa16.38■□□□□ 0.21
CACTIN-203ENST00000429344 DDTLA6NHG4 134 aaPredicted RBP16.38■□□□□ 0.21
CACTIN-203ENST00000429344 USP17L15C9J2P7 530 aa16.38■□□□□ 0.21
CACTIN-203ENST00000429344 USP17L13C9JLJ4 530 aa16.38■□□□□ 0.21
CACTIN-203ENST00000429344 USP17L11C9JVI0 530 aa16.38■□□□□ 0.21
CACTIN-203ENST00000429344 USP17L18D6R9N7 530 aa16.38■□□□□ 0.21
CACTIN-203ENST00000429344 USP17L22D6RA61 530 aa16.38■□□□□ 0.21
CACTIN-203ENST00000429344 USP17L17D6RBQ6 530 aa16.38■□□□□ 0.21
CACTIN-203ENST00000429344 USP17L19D6RCP7 530 aa16.38■□□□□ 0.21
CACTIN-203ENST00000429344 USP17L20D6RJB6 530 aa16.38■□□□□ 0.21
CACTIN-203ENST00000429344 KLHL30Q0D2K2 578 aa16.38■□□□□ 0.21
CACTIN-203ENST00000429344 USP17L24Q0WX57 530 aa16.38■□□□□ 0.21
CACTIN-203ENST00000429344 PAK2Q13177 524 aa16.38■□□□□ 0.21
CACTIN-203ENST00000429344 MAN2A1Q16706 1144 aa16.38■□□□□ 0.21
CACTIN-203ENST00000429344 SHROOM1Q2M3G4 852 aaPredicted RBP16.38■□□□□ 0.21
CACTIN-203ENST00000429344 USP17L6PQ6QN14 398 aa16.38■□□□□ 0.21
CACTIN-203ENST00000429344 CCDC17Q96LX7 622 aa16.38■□□□□ 0.21
CACTIN-203ENST00000429344 TLR10Q9BXR5 811 aa16.38■□□□□ 0.21
CACTIN-203ENST00000429344 SUGT1Q9Y2Z0 365 aa16.38■□□□□ 0.21
CACTIN-203ENST00000429344 CTDP1Q9Y5B0 961 aaPredicted RBP16.38■□□□□ 0.21
CACTIN-203ENST00000429344 STRIP1Q5VSL9 837 aa16.38■□□□□ 0.21
CACTIN-203ENST00000429344 MIGA2Q7L4E1 593 aa16.38■□□□□ 0.21
CACTIN-203ENST00000429344 CCDC84Q86UT8 332 aaPredicted RBP16.38■□□□□ 0.21
CACTIN-203ENST00000429344 LARP4BQ92615 738 aaKnown RBP16.38■□□□□ 0.21
CACTIN-203ENST00000429344 TTYH3Q9C0H2 523 aa16.38■□□□□ 0.21
CACTIN-203ENST00000429344 DPH5Q9H2P9 285 aa16.38■□□□□ 0.21
CACTIN-203ENST00000429344 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.38■□□□□ 0.21
CACTIN-203ENST00000429344 KLRC1P26715 233 aa16.38■□□□□ 0.21
CACTIN-203ENST00000429344 BAG6P46379 1132 aa16.38■□□□□ 0.21
CACTIN-203ENST00000429344 GPATCH4Q5T3I0 446 aaKnown RBP16.38■□□□□ 0.21
CACTIN-203ENST00000429344 HHIPL2Q6UWX4 724 aa16.38■□□□□ 0.21
CACTIN-203ENST00000429344 BMP2KQ9NSY1 1161 aaPredicted RBP16.38■□□□□ 0.21
CACTIN-203ENST00000429344 PLAAQ9Y263 795 aa16.38■□□□□ 0.21
CACTIN-203ENST00000429344 DUOX1Q9NRD9 1551 aa16.37■□□□□ 0.21
CACTIN-203ENST00000429344 TLDC2A0PJX2 215 aa16.37■□□□□ 0.21
CACTIN-203ENST00000429344 DCAF17Q5H9S7 520 aaPredicted RBP16.37■□□□□ 0.21
CACTIN-203ENST00000429344 EMBQ6PCB8 327 aa16.37■□□□□ 0.21
CACTIN-203ENST00000429344 MMGT1Q8N4V1 131 aa16.37■□□□□ 0.21
CACTIN-203ENST00000429344 TTLL6Q8N841 843 aa16.37■□□□□ 0.21
CACTIN-203ENST00000429344 AKT1S1Q96B36 256 aa16.37■□□□□ 0.21
CACTIN-203ENST00000429344 CCSER1Q9C0I3 900 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 158.1 ms