RNA–Protein interactions for RNA: ENST00000428950.2

CCDC144A-208, Transcript of coiled-coil domain containing 144A, human

TSL 5

Gene CCDC144A, Length 780 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCDC144A-208	ENST00000428950		K7ESM1	405 aa		4.9	□□□□□ -1.63
CCDC144A-208	ENST00000428950	WNT9A	O14904	365 aa		4.9	□□□□□ -1.63
CCDC144A-208	ENST00000428950	NAT1	P18440	290 aa		4.9	□□□□□ -1.63
CCDC144A-208	ENST00000428950	IL13	P35225	146 aa		4.9	□□□□□ -1.63
CCDC144A-208	ENST00000428950	EPHA5	P54756	1037 aa		4.9	□□□□□ -1.63
CCDC144A-208	ENST00000428950	MLLT6	P55198	1093 aa	Predicted RBP	4.9	□□□□□ -1.63
CCDC144A-208	ENST00000428950	GABRE	P78334	506 aa		4.9	□□□□□ -1.63
CCDC144A-208	ENST00000428950	SF3A1	Q15459	793 aa	Known RBP	4.9	□□□□□ -1.63
CCDC144A-208	ENST00000428950	SPATS1	Q496A3	300 aa		4.9	□□□□□ -1.63
CCDC144A-208	ENST00000428950	KCTD1	Q719H9	257 aa		4.9	□□□□□ -1.63
CCDC144A-208	ENST00000428950	MRPS23	Q9Y3D9	190 aa	Known RBP	4.9	□□□□□ -1.63
CCDC144A-208	ENST00000428950	ARVCF	O00192	962 aa		4.89	□□□□□ -1.63
CCDC144A-208	ENST00000428950	PLAT	P00750	562 aa		4.89	□□□□□ -1.63
CCDC144A-208	ENST00000428950	CYP1A1	P04798	512 aa	Predicted RBP	4.89	□□□□□ -1.63
CCDC144A-208	ENST00000428950	ITGB3	P05106	788 aa		4.89	□□□□□ -1.63
CCDC144A-208	ENST00000428950	COL6A1	P12109	1028 aa		4.89	□□□□□ -1.63
CCDC144A-208	ENST00000428950	KRTAP10-2	P60368	255 aa		4.89	□□□□□ -1.63
CCDC144A-208	ENST00000428950	GUCY1A3	Q02108	690 aa		4.89	□□□□□ -1.63
CCDC144A-208	ENST00000428950	ZC3H12B	Q5HYM0	836 aa	Known RBP	4.89	□□□□□ -1.63
CCDC144A-208	ENST00000428950	CD276	Q5ZPR3	534 aa		4.89	□□□□□ -1.63
CCDC144A-208	ENST00000428950	TRMT10B	Q6PF06	316 aa	Known RBP	4.89	□□□□□ -1.63
CCDC144A-208	ENST00000428950	PCDH19	Q8TAB3	1148 aa		4.89	□□□□□ -1.63
CCDC144A-208	ENST00000428950	MBD6	Q96DN6	1003 aa		4.89	□□□□□ -1.63
CCDC144A-208	ENST00000428950	DHRS4	Q9BTZ2	278 aa		4.89	□□□□□ -1.63
CCDC144A-208	ENST00000428950	CD244	Q9BZW8	370 aa		4.89	□□□□□ -1.63
CCDC144A-208	ENST00000428950	TMEM168	Q9H0V1	697 aa		4.89	□□□□□ -1.63
CCDC144A-208	ENST00000428950	FTSJ1	Q9UET6	329 aa		4.89	□□□□□ -1.63
CCDC144A-208	ENST00000428950	INVS	Q9Y283	1065 aa		4.89	□□□□□ -1.63
CCDC144A-208	ENST00000428950	TCRBV5S4A2T	A0A5A2	114 aa		4.88	□□□□□ -1.63
CCDC144A-208	ENST00000428950	ZNF839	A8K0R7	811 aa		4.88	□□□□□ -1.63
CCDC144A-208	ENST00000428950	GPR19	Q15760	415 aa		4.88	□□□□□ -1.63
CCDC144A-208	ENST00000428950	SKIDA1	Q1XH10	827 aa		4.88	□□□□□ -1.63
CCDC144A-208	ENST00000428950	SOGA3	Q5TF21	947 aa		4.88	□□□□□ -1.63
CCDC144A-208	ENST00000428950	PKN3	Q6P5Z2	889 aa		4.88	□□□□□ -1.63
CCDC144A-208	ENST00000428950	PLEKHH3	Q7Z736	793 aa		4.88	□□□□□ -1.63
CCDC144A-208	ENST00000428950	SH3RF2	Q8TEC5	729 aa		4.88	□□□□□ -1.63
CCDC144A-208	ENST00000428950	KISS1R	Q969F8	398 aa	Predicted RBP	4.88	□□□□□ -1.63
CCDC144A-208	ENST00000428950	FBXW5	Q969U6	566 aa		4.88	□□□□□ -1.63
CCDC144A-208	ENST00000428950	MKL1	Q969V6	931 aa		4.88	□□□□□ -1.63
CCDC144A-208	ENST00000428950	SRPK1	Q96SB4	655 aa	Known RBP	4.88	□□□□□ -1.63
CCDC144A-208	ENST00000428950	SRPK3	Q9UPE1	567 aa		4.88	□□□□□ -1.63
CCDC144A-208	ENST00000428950	PCDHA8	Q9Y5H6	950 aa		4.88	□□□□□ -1.63
CCDC144A-208	ENST00000428950	ACOT7	O00154	380 aa		4.87	□□□□□ -1.63
CCDC144A-208	ENST00000428950	B4GALT3	O60512	393 aa		4.87	□□□□□ -1.63
CCDC144A-208	ENST00000428950	CRTAM	O95727	393 aa		4.87	□□□□□ -1.63
CCDC144A-208	ENST00000428950	CHGB	P05060	677 aa		4.87	□□□□□ -1.63
CCDC144A-208	ENST00000428950	CKM	P06732	381 aa		4.87	□□□□□ -1.63
CCDC144A-208	ENST00000428950	ADRB1	P08588	477 aa		4.87	□□□□□ -1.63
CCDC144A-208	ENST00000428950	NFKB2	Q00653	900 aa		4.87	□□□□□ -1.63
CCDC144A-208	ENST00000428950	ZNF827	Q17R98	1081 aa		4.87	□□□□□ -1.63
CCDC144A-208	ENST00000428950	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	4.87	□□□□□ -1.63
CCDC144A-208	ENST00000428950	FIGN	Q5HY92	759 aa		4.87	□□□□□ -1.63
CCDC144A-208	ENST00000428950	PHF19	Q5T6S3	580 aa		4.87	□□□□□ -1.63
CCDC144A-208	ENST00000428950	NLGN4X	Q8N0W4	816 aa		4.87	□□□□□ -1.63
CCDC144A-208	ENST00000428950	KLHL36	Q8N4N3	616 aa		4.87	□□□□□ -1.63
CCDC144A-208	ENST00000428950	RBM15	Q96T37	977 aa	Known RBP eCLIP	4.87	□□□□□ -1.63
CCDC144A-208	ENST00000428950	DNAJC7	Q99615	494 aa		4.87	□□□□□ -1.63
CCDC144A-208	ENST00000428950	CATSPERZ	Q9NTU4	200 aa		4.87	□□□□□ -1.63
CCDC144A-208	ENST00000428950	NDOR1	Q9UHB4	597 aa		4.87	□□□□□ -1.63
CCDC144A-208	ENST00000428950	ZFP69B	Q9UJL9	534 aa		4.87	□□□□□ -1.63
CCDC144A-208	ENST00000428950	CBLC	Q9ULV8	474 aa		4.87	□□□□□ -1.63
CCDC144A-208	ENST00000428950	PCDHA9	Q9Y5H5	950 aa		4.87	□□□□□ -1.63
CCDC144A-208	ENST00000428950	MAN2B1	O00754	1011 aa		4.86	□□□□□ -1.63
CCDC144A-208	ENST00000428950	FBXO21	O94952	628 aa		4.86	□□□□□ -1.63
CCDC144A-208	ENST00000428950	KNG1	P01042	644 aa		4.86	□□□□□ -1.63
CCDC144A-208	ENST00000428950	AMY2A	P04746	511 aa		4.86	□□□□□ -1.63
CCDC144A-208	ENST00000428950	ENO2	P09104	434 aa	Predicted RBP	4.86	□□□□□ -1.63
CCDC144A-208	ENST00000428950	SRGAP2C	P0DJJ0	459 aa		4.86	□□□□□ -1.63
CCDC144A-208	ENST00000428950	PYGM	P11217	842 aa		4.86	□□□□□ -1.63
CCDC144A-208	ENST00000428950	PDE6A	P16499	860 aa		4.86	□□□□□ -1.63
CCDC144A-208	ENST00000428950	PTPN1	P18031	435 aa	Known RBP	4.86	□□□□□ -1.63
CCDC144A-208	ENST00000428950	AMY2B	P19961	511 aa		4.86	□□□□□ -1.63
CCDC144A-208	ENST00000428950	GLRB	P48167	497 aa		4.86	□□□□□ -1.63
CCDC144A-208	ENST00000428950	ST5	P78524	1137 aa		4.86	□□□□□ -1.63
CCDC144A-208	ENST00000428950	PFKP	Q01813	784 aa		4.86	□□□□□ -1.63
CCDC144A-208	ENST00000428950	NFATC3	Q12968	1075 aa		4.86	□□□□□ -1.63
CCDC144A-208	ENST00000428950	SURF1	Q15526	300 aa		4.86	□□□□□ -1.63
CCDC144A-208	ENST00000428950	SMAD2	Q15796	467 aa	Known RBP	4.86	□□□□□ -1.63
CCDC144A-208	ENST00000428950	FAM47C	Q5HY64	1035 aa		4.86	□□□□□ -1.63
CCDC144A-208	ENST00000428950	BTBD8	Q5XKL5	378 aa		4.86	□□□□□ -1.63
CCDC144A-208	ENST00000428950	HHIPL2	Q6UWX4	724 aa		4.86	□□□□□ -1.63
CCDC144A-208	ENST00000428950	ARHGAP36	Q6ZRI8	547 aa		4.86	□□□□□ -1.63
CCDC144A-208	ENST00000428950	C16orf59	Q7L2K0	433 aa		4.86	□□□□□ -1.63
CCDC144A-208	ENST00000428950	PTRH1	Q86Y79	214 aa	Known RBP	4.86	□□□□□ -1.63
CCDC144A-208	ENST00000428950	JMY	Q8N9B5	988 aa		4.86	□□□□□ -1.63
CCDC144A-208	ENST00000428950	ZSWIM2	Q8NEG5	633 aa		4.86	□□□□□ -1.63
CCDC144A-208	ENST00000428950	NUDT10	Q8NFP7	164 aa		4.86	□□□□□ -1.63
CCDC144A-208	ENST00000428950	PMFBP1	Q8TBY8	1022 aa		4.86	□□□□□ -1.63
CCDC144A-208	ENST00000428950	NUDT11	Q96G61	164 aa		4.86	□□□□□ -1.63
CCDC144A-208	ENST00000428950	SLC52A2	Q9HAB3	445 aa		4.86	□□□□□ -1.63
CCDC144A-208	ENST00000428950	BARX1	Q9HBU1	254 aa	Predicted RBP	4.86	□□□□□ -1.63
CCDC144A-208	ENST00000428950	KCND1	Q9NSA2	647 aa		4.86	□□□□□ -1.63
CCDC144A-208	ENST00000428950	ARHGAP20	Q9P2F6	1191 aa		4.86	□□□□□ -1.63
CCDC144A-208	ENST00000428950	ATP23	Q9Y6H3	246 aa		4.86	□□□□□ -1.63
CCDC144A-208	ENST00000428950	CCDC66	A2RUB6	948 aa		4.85	□□□□□ -1.63
CCDC144A-208	ENST00000428950	FAM90A27P	A6NNH2	459 aa		4.85	□□□□□ -1.63
CCDC144A-208	ENST00000428950	ZNF561-AS1	K7EIQ3	104 aa		4.85	□□□□□ -1.63
CCDC144A-208	ENST00000428950	GSTA4	O15217	222 aa		4.85	□□□□□ -1.63
CCDC144A-208	ENST00000428950	LAMTOR5	O43504	91 aa		4.85	□□□□□ -1.63
CCDC144A-208	ENST00000428950	EFCAB14	O75071	495 aa		4.85	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms