RNA–Protein interactions for RNA: ENST00000428098.5

DDX39B-208, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-208ENST00000428098 UBALD2Q8IYN6 164 aa13.99□□□□□ -0.17
DDX39B-208ENST00000428098 IWS1Q96ST2 819 aa13.99□□□□□ -0.17
DDX39B-208ENST00000428098 RMDN3Q96TC7 470 aa13.99□□□□□ -0.17
DDX39B-208ENST00000428098 SEC62Q99442 399 aaKnown RBP13.99□□□□□ -0.17
DDX39B-208ENST00000428098 TMEM47Q9BQJ4 181 aa13.99□□□□□ -0.17
DDX39B-208ENST00000428098 SETD4Q9NVD3 440 aa13.99□□□□□ -0.17
DDX39B-208ENST00000428098 SORCS3Q9UPU3 1222 aa13.99□□□□□ -0.17
DDX39B-208ENST00000428098 MRVI1Q9Y6F6 885 aa13.99□□□□□ -0.17
DDX39B-208ENST00000428098 WDR19Q8NEZ3 1342 aa13.98□□□□□ -0.17
DDX39B-208ENST00000428098 H3BRB1 525 aa13.98□□□□□ -0.17
DDX39B-208ENST00000428098 CAND2O75155 1236 aa13.98□□□□□ -0.17
DDX39B-208ENST00000428098 NR3C2P08235 984 aa13.98□□□□□ -0.17
DDX39B-208ENST00000428098 GHRP10912 638 aa13.98□□□□□ -0.17
DDX39B-208ENST00000428098 GNAT2P19087 354 aa13.98□□□□□ -0.17
DDX39B-208ENST00000428098 EIF2AK2P19525 551 aaKnown RBP13.98□□□□□ -0.17
DDX39B-208ENST00000428098 MTMR3Q13615 1198 aa13.98□□□□□ -0.17
DDX39B-208ENST00000428098 LPIN1Q14693 890 aa13.98□□□□□ -0.17
DDX39B-208ENST00000428098 KBTBD3Q8NAB2 608 aa13.98□□□□□ -0.17
DDX39B-208ENST00000428098 SPATA33Q96N06 139 aa13.98□□□□□ -0.17
DDX39B-208ENST00000428098 CPVLQ9H3G5 476 aa13.98□□□□□ -0.17
DDX39B-208ENST00000428098 TUT1Q9H6E5 874 aaKnown RBP13.98□□□□□ -0.17
DDX39B-208ENST00000428098 USP24Q9UPU5 2620 aa13.98□□□□□ -0.17
DDX39B-208ENST00000428098 RANBP6O60518 1105 aaKnown RBP13.97□□□□□ -0.17
DDX39B-208ENST00000428098 ASGR2P07307 311 aa13.97□□□□□ -0.17
DDX39B-208ENST00000428098 NPR3P17342 541 aa13.97□□□□□ -0.17
DDX39B-208ENST00000428098 ERVFC1P60507 584 aa13.97□□□□□ -0.17
DDX39B-208ENST00000428098 ADAM17P78536 824 aa13.97□□□□□ -0.17
DDX39B-208ENST00000428098 ANGPT1Q15389 498 aa13.97□□□□□ -0.17
DDX39B-208ENST00000428098 DUSP6Q16828 381 aa13.97□□□□□ -0.17
DDX39B-208ENST00000428098 PPP4R3BQ5MIZ7 849 aa13.97□□□□□ -0.17
DDX39B-208ENST00000428098 CWF19L1Q69YN2 538 aaKnown RBP13.97□□□□□ -0.17
DDX39B-208ENST00000428098 ANKRD54Q6NXT1 300 aa13.97□□□□□ -0.17
DDX39B-208ENST00000428098 TMEM184AQ6ZMB5 413 aa13.97□□□□□ -0.17
DDX39B-208ENST00000428098 KCNG4Q8TDN1 519 aa13.97□□□□□ -0.17
DDX39B-208ENST00000428098 MICAL1Q8TDZ2 1067 aa13.97□□□□□ -0.17
DDX39B-208ENST00000428098 LINC01599Q8WXQ3 324 aa13.97□□□□□ -0.17
DDX39B-208ENST00000428098 GPKOWQ92917 476 aaPredicted RBP eCLIP13.97□□□□□ -0.17
DDX39B-208ENST00000428098 NEK1Q96PY6 1258 aa13.97□□□□□ -0.17
DDX39B-208ENST00000428098 TSHZ2Q9NRE2 1034 aa13.97□□□□□ -0.17
DDX39B-208ENST00000428098 GPR179Q6PRD1 2367 aa13.96□□□□□ -0.17
DDX39B-208ENST00000428098 C2CD4DB7Z1M9 353 aa13.96□□□□□ -0.17
DDX39B-208ENST00000428098 FOXP2O15409 715 aa13.96□□□□□ -0.17
DDX39B-208ENST00000428098 RAB11FIP3O75154 756 aa13.96□□□□□ -0.17
DDX39B-208ENST00000428098 GGPS1O95749 300 aa13.96□□□□□ -0.17
DDX39B-208ENST00000428098 SLC3A2P08195 630 aaKnown RBP13.96□□□□□ -0.17
DDX39B-208ENST00000428098 PDHBP11177 359 aa13.96□□□□□ -0.17
DDX39B-208ENST00000428098 TECP42680 631 aa13.96□□□□□ -0.17
DDX39B-208ENST00000428098 GATMP50440 423 aa13.96□□□□□ -0.17
DDX39B-208ENST00000428098 ZNF543Q08ER8 600 aa13.96□□□□□ -0.17
DDX39B-208ENST00000428098 PAN2Q504Q3 1202 aaKnown RBP13.96□□□□□ -0.17
DDX39B-208ENST00000428098 FTSJ3Q8IY81 847 aaKnown RBP13.96□□□□□ -0.17
DDX39B-208ENST00000428098 CMTR2Q8IYT2 770 aaKnown RBP13.96□□□□□ -0.17
DDX39B-208ENST00000428098 DCLK2Q8N568 766 aa13.96□□□□□ -0.17
DDX39B-208ENST00000428098 FLCNQ8NFG4 579 aa13.96□□□□□ -0.17
DDX39B-208ENST00000428098 ZFP91Q96JP5 570 aaPredicted RBP13.96□□□□□ -0.17
DDX39B-208ENST00000428098 PNMA2Q9UL42 364 aa13.96□□□□□ -0.17
DDX39B-208ENST00000428098 KIAA1671Q9BY89 1806 aa13.95□□□□□ -0.18
DDX39B-208ENST00000428098 LMNAP02545 664 aaKnown RBP13.95□□□□□ -0.18
DDX39B-208ENST00000428098 LGALS2P05162 132 aa13.95□□□□□ -0.18
DDX39B-208ENST00000428098 TOP1P11387 765 aaKnown RBP13.95□□□□□ -0.18
DDX39B-208ENST00000428098 ARHGEF16Q5VV41 709 aa13.95□□□□□ -0.18
DDX39B-208ENST00000428098 CCDC105Q8IYK2 499 aa13.95□□□□□ -0.18
DDX39B-208ENST00000428098 NACAP1Q9BZK3 213 aa13.95□□□□□ -0.18
DDX39B-208ENST00000428098 UBA5Q9GZZ9 404 aa13.95□□□□□ -0.18
DDX39B-208ENST00000428098 AGO3Q9H9G7 860 aaKnown RBP13.95□□□□□ -0.18
DDX39B-208ENST00000428098 PXMP2Q9NR77 195 aa13.95□□□□□ -0.18
DDX39B-208ENST00000428098 LIMD1Q9UGP4 676 aa13.95□□□□□ -0.18
DDX39B-208ENST00000428098 RALYQ9UKM9 306 aaKnown RBP13.95□□□□□ -0.18
DDX39B-208ENST00000428098 TELO2Q9Y4R8 837 aa13.95□□□□□ -0.18
DDX39B-208ENST00000428098 R4GN57 208 aa13.95□□□□□ -0.18
DDX39B-208ENST00000428098 PLXNA4Q9HCM2 1894 aa13.95□□□□□ -0.18
DDX39B-208ENST00000428098 SMARCA5O60264 1052 aaPredicted RBP13.94□□□□□ -0.18
DDX39B-208ENST00000428098 GOLGA8HP0CJ92 632 aa13.94□□□□□ -0.18
DDX39B-208ENST00000428098 MGAT3Q09327 533 aa13.94□□□□□ -0.18
DDX39B-208ENST00000428098 RUFY4Q6ZNE9 571 aa13.94□□□□□ -0.18
DDX39B-208ENST00000428098 DTWD2Q8NBA8 298 aa13.94□□□□□ -0.18
DDX39B-208ENST00000428098 NAPBQ9H115 298 aa13.94□□□□□ -0.18
DDX39B-208ENST00000428098 MFSD1Q9H3U5 465 aa13.94□□□□□ -0.18
DDX39B-208ENST00000428098 POMKQ9H5K3 350 aa13.94□□□□□ -0.18
DDX39B-208ENST00000428098 FSCN2O14926 492 aa13.93□□□□□ -0.18
DDX39B-208ENST00000428098 SNHG28P0DPA3 235 aa13.93□□□□□ -0.18
DDX39B-208ENST00000428098 AOC1P19801 751 aa13.93□□□□□ -0.18
DDX39B-208ENST00000428098 UBA1P22314 1058 aaKnown RBP13.93□□□□□ -0.18
DDX39B-208ENST00000428098 RSPO4Q2I0M5 234 aaPredicted RBP13.93□□□□□ -0.18
DDX39B-208ENST00000428098 PANK1Q8TE04 598 aa13.93□□□□□ -0.18
DDX39B-208ENST00000428098 LMBR1Q8WVP7 490 aa13.93□□□□□ -0.18
DDX39B-208ENST00000428098 CDCA3Q99618 268 aaPredicted RBP13.93□□□□□ -0.18
DDX39B-208ENST00000428098 NR2E1Q9Y466 385 aa13.93□□□□□ -0.18
DDX39B-208ENST00000428098 FGRP09769 529 aa13.92□□□□□ -0.18
DDX39B-208ENST00000428098 MYCLP12524 364 aaPredicted RBP13.92□□□□□ -0.18
DDX39B-208ENST00000428098 ARHGAP4P98171 946 aa13.92□□□□□ -0.18
DDX39B-208ENST00000428098 FBXO47Q5MNV8 452 aa13.92□□□□□ -0.18
DDX39B-208ENST00000428098 TSHZ3Q63HK5 1081 aa13.92□□□□□ -0.18
DDX39B-208ENST00000428098 LLGL2Q6P1M3 1020 aa13.92□□□□□ -0.18
DDX39B-208ENST00000428098 VSIG10LQ86VR7 867 aa13.92□□□□□ -0.18
DDX39B-208ENST00000428098 TRIM50Q86XT4 487 aa13.92□□□□□ -0.18
DDX39B-208ENST00000428098 IL31RAQ8NI17 732 aa13.92□□□□□ -0.18
DDX39B-208ENST00000428098 CYP2W1Q8TAV3 490 aa13.92□□□□□ -0.18
DDX39B-208ENST00000428098 PDCD2LQ9BRP1 358 aa13.92□□□□□ -0.18
DDX39B-208ENST00000428098 MAF1Q9H063 256 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms