RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 CDKL5O76039 1030 aa23.53■■□□□ 1.36
HSPG2-205ENST00000427897 DEXIO95424 95 aa23.53■■□□□ 1.36
HSPG2-205ENST00000427897 ARP10275 920 aa23.53■■□□□ 1.36
HSPG2-205ENST00000427897 THPOP40225 353 aa23.53■■□□□ 1.36
HSPG2-205ENST00000427897 PLA2G4DQ86XP0 818 aa23.53■■□□□ 1.36
HSPG2-205ENST00000427897 CYP2W1Q8TAV3 490 aa23.53■■□□□ 1.36
HSPG2-205ENST00000427897 TNPO1Q92973 898 aaKnown RBP23.53■■□□□ 1.36
HSPG2-205ENST00000427897 SH3GLB2Q9NR46 395 aa23.53■■□□□ 1.36
HSPG2-205ENST00000427897 SETD4Q9NVD3 440 aa23.53■■□□□ 1.36
HSPG2-205ENST00000427897 ERAP1Q9NZ08 941 aa23.53■■□□□ 1.36
HSPG2-205ENST00000427897 TCEAL9Q9UHQ7 104 aa23.53■■□□□ 1.36
HSPG2-205ENST00000427897 SCN5AQ14524 2016 aa23.52■■□□□ 1.36
HSPG2-205ENST00000427897 TREHO43280 583 aa23.52■■□□□ 1.36
HSPG2-205ENST00000427897 MARK3P27448 753 aa23.52■■□□□ 1.36
HSPG2-205ENST00000427897 DHX38Q92620 1227 aaKnown RBP23.52■■□□□ 1.36
HSPG2-205ENST00000427897 CTAGE1Q96RT6 745 aa23.52■■□□□ 1.36
HSPG2-205ENST00000427897 TELO2Q9Y4R8 837 aa23.52■■□□□ 1.36
HSPG2-205ENST00000427897 SZT2Q5T011 3432 aa23.51■■□□□ 1.35
HSPG2-205ENST00000427897 GSTTP1A0A1W2PQM5 241 aa23.51■■□□□ 1.35
HSPG2-205ENST00000427897 DDX39AO00148 427 aaKnown RBP23.51■■□□□ 1.35
HSPG2-205ENST00000427897 MEIS1O00470 390 aa23.51■■□□□ 1.35
HSPG2-205ENST00000427897 ATP2A2P16615 1042 aaKnown RBP23.51■■□□□ 1.35
HSPG2-205ENST00000427897 KCNJ6P48051 423 aa23.51■■□□□ 1.35
HSPG2-205ENST00000427897 ZNF618Q5T7W0 954 aa23.51■■□□□ 1.35
HSPG2-205ENST00000427897 NIPA1Q7RTP0 329 aa23.51■■□□□ 1.35
HSPG2-205ENST00000427897 SERINC5Q86VE9 423 aa23.51■■□□□ 1.35
HSPG2-205ENST00000427897 PBX4Q9BYU1 374 aa23.51■■□□□ 1.35
HSPG2-205ENST00000427897 AGO4Q9HCK5 861 aaKnown RBP23.51■■□□□ 1.35
HSPG2-205ENST00000427897 NFASCO94856 1347 aa23.51■■□□□ 1.35
HSPG2-205ENST00000427897 NRCAMQ92823 1304 aa23.51■■□□□ 1.35
HSPG2-205ENST00000427897 TANC1Q9C0D5 1861 aa23.5■■□□□ 1.35
HSPG2-205ENST00000427897 RSPH10B2B2RC85 870 aa23.5■■□□□ 1.35
HSPG2-205ENST00000427897 RSPH10BP0C881 870 aa23.5■■□□□ 1.35
HSPG2-205ENST00000427897 PBX2P40425 430 aa23.5■■□□□ 1.35
HSPG2-205ENST00000427897 RBL2Q08999 1139 aa23.5■■□□□ 1.35
HSPG2-205ENST00000427897 ZNF576Q9H609 170 aa23.5■■□□□ 1.35
HSPG2-205ENST00000427897 SLC28A3Q9HAS3 691 aa23.5■■□□□ 1.35
HSPG2-205ENST00000427897 LAMA3Q16787 3333 aa23.5■■□□□ 1.35
HSPG2-205ENST00000427897 BAIAP3O94812 1187 aa23.49■■□□□ 1.35
HSPG2-205ENST00000427897 CYP3A4P08684 503 aa23.49■■□□□ 1.35
HSPG2-205ENST00000427897 XBP1P17861 261 aa23.49■■□□□ 1.35
HSPG2-205ENST00000427897 ACTR2P61160 394 aa23.49■■□□□ 1.35
HSPG2-205ENST00000427897 HIC1Q14526 733 aa23.49■■□□□ 1.35
HSPG2-205ENST00000427897 RASGRP4Q8TDF6 673 aa23.49■■□□□ 1.35
HSPG2-205ENST00000427897 CDX2Q99626 313 aaPredicted RBP23.49■■□□□ 1.35
HSPG2-205ENST00000427897 ZNF577Q9BSK1 485 aa23.49■■□□□ 1.35
HSPG2-205ENST00000427897 TTYH1Q9H313 450 aaPredicted RBP23.49■■□□□ 1.35
HSPG2-205ENST00000427897 KIF28PB7ZC32 967 aa23.48■■□□□ 1.35
HSPG2-205ENST00000427897 SETQ01105 290 aaPredicted RBP23.48■■□□□ 1.35
HSPG2-205ENST00000427897 PPFIA1Q13136 1202 aa23.48■■□□□ 1.35
HSPG2-205ENST00000427897 IKBKEQ14164 716 aa23.48■■□□□ 1.35
HSPG2-205ENST00000427897 CNKSR3Q6P9H4 555 aa23.48■■□□□ 1.35
HSPG2-205ENST00000427897 GUCD1Q96NT3 240 aa23.48■■□□□ 1.35
HSPG2-205ENST00000427897 SLC9A7Q96T83 725 aa23.48■■□□□ 1.35
HSPG2-205ENST00000427897 C22orf23Q9BZE7 217 aa23.48■■□□□ 1.35
HSPG2-205ENST00000427897 TRPC6Q9Y210 931 aa23.48■■□□□ 1.35
HSPG2-205ENST00000427897 EMSYQ7Z589 1322 aa23.48■■□□□ 1.35
HSPG2-205ENST00000427897 KAT6AQ92794 2004 aa23.47■■□□□ 1.35
HSPG2-205ENST00000427897 FAM86B1E9PN63 330 aa23.47■■□□□ 1.35
HSPG2-205ENST00000427897 BACH1O14867 736 aa23.47■■□□□ 1.35
HSPG2-205ENST00000427897 FAM86B2P0C5J1 330 aa23.47■■□□□ 1.35
HSPG2-205ENST00000427897 STAT5BP51692 787 aa23.47■■□□□ 1.35
HSPG2-205ENST00000427897 RABGGTBP53611 331 aa23.47■■□□□ 1.35
HSPG2-205ENST00000427897 AK2P54819 239 aa23.47■■□□□ 1.35
HSPG2-205ENST00000427897 IGBP1P78318 339 aa23.47■■□□□ 1.35
HSPG2-205ENST00000427897 TRIM71Q2Q1W2 868 aaKnown RBP23.47■■□□□ 1.35
HSPG2-205ENST00000427897 PRR16Q569H4 304 aa23.47■■□□□ 1.35
HSPG2-205ENST00000427897 FAM160B1Q5W0V3 765 aa23.47■■□□□ 1.35
HSPG2-205ENST00000427897 RSPH3Q86UC2 560 aa23.47■■□□□ 1.35
HSPG2-205ENST00000427897 LMBR1Q8WVP7 490 aa23.47■■□□□ 1.35
HSPG2-205ENST00000427897 MYLIPQ8WY64 445 aa23.47■■□□□ 1.35
HSPG2-205ENST00000427897 WNT8BQ93098 351 aa23.47■■□□□ 1.35
HSPG2-205ENST00000427897 UIMC1Q96RL1 719 aa23.47■■□□□ 1.35
HSPG2-205ENST00000427897 NKX2-4Q9H2Z4 354 aa23.47■■□□□ 1.35
HSPG2-205ENST00000427897 TBC1D22BQ9NU19 505 aa23.47■■□□□ 1.35
HSPG2-205ENST00000427897 TPCN1Q9ULQ1 816 aa23.47■■□□□ 1.35
HSPG2-205ENST00000427897 PCDHA4Q9UN74 947 aa23.47■■□□□ 1.35
HSPG2-205ENST00000427897 IPO5O00410 1097 aaKnown RBP23.46■■□□□ 1.35
HSPG2-205ENST00000427897 NEK4P51957 841 aa23.46■■□□□ 1.35
HSPG2-205ENST00000427897 SCRN1Q12765 414 aa23.46■■□□□ 1.35
HSPG2-205ENST00000427897 ITGB3BPQ13352 177 aaPredicted RBP23.46■■□□□ 1.35
HSPG2-205ENST00000427897 GRIK4Q16099 956 aa23.46■■□□□ 1.35
HSPG2-205ENST00000427897 BLIDQ8IZY5 108 aa23.46■■□□□ 1.35
HSPG2-205ENST00000427897 PHOSPHO2Q8TCD6 241 aa23.46■■□□□ 1.35
HSPG2-205ENST00000427897 VWCEQ96DN2 955 aa23.46■■□□□ 1.35
HSPG2-205ENST00000427897 ZBED2Q9BTP6 218 aa23.46■■□□□ 1.35
HSPG2-205ENST00000427897 PCDHA11Q9Y5I1 949 aa23.46■■□□□ 1.35
HSPG2-205ENST00000427897 RRN3P2A6NIE6 340 aa23.45■■□□□ 1.34
HSPG2-205ENST00000427897 ADAMTS3O15072 1205 aa23.45■■□□□ 1.34
HSPG2-205ENST00000427897 PFKFB2O60825 505 aa23.45■■□□□ 1.34
HSPG2-205ENST00000427897 NBNO60934 754 aa23.45■■□□□ 1.34
HSPG2-205ENST00000427897 EFCAB14O75071 495 aa23.45■■□□□ 1.34
HSPG2-205ENST00000427897 CAND2O75155 1236 aa23.45■■□□□ 1.34
HSPG2-205ENST00000427897 CTSHP09668 335 aa23.45■■□□□ 1.34
HSPG2-205ENST00000427897 FOSL2P15408 326 aa23.45■■□□□ 1.34
HSPG2-205ENST00000427897 GALNT17Q6IS24 598 aa23.45■■□□□ 1.34
HSPG2-205ENST00000427897 MIS18BP1Q6P0N0 1132 aa23.45■■□□□ 1.34
HSPG2-205ENST00000427897 SLC17A8Q8NDX2 589 aa23.45■■□□□ 1.34
HSPG2-205ENST00000427897 SAMM50Q9Y512 469 aa23.45■■□□□ 1.34
HSPG2-205ENST00000427897 ABHD14A-ACY1A0A1B0GW23 586 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms