RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 COASYQ13057 564 aa16.05■□□□□ 0.16
CDK3-201ENST00000425876 PABPC4Q13310 644 aaKnown RBP eCLIP16.05■□□□□ 0.16
CDK3-201ENST00000425876 NR1I3Q14994 352 aa16.05■□□□□ 0.16
CDK3-201ENST00000425876 ARSHQ5FYA8 562 aa16.05■□□□□ 0.16
CDK3-201ENST00000425876 CENPPQ6IPU0 288 aa16.05■□□□□ 0.16
CDK3-201ENST00000425876 TMC6Q7Z403 805 aa16.05■□□□□ 0.16
CDK3-201ENST00000425876 FILIP1Q7Z7B0 1213 aa16.05■□□□□ 0.16
CDK3-201ENST00000425876 ANKRD20A12PQ8NF67 263 aa16.05■□□□□ 0.16
CDK3-201ENST00000425876 OPTNQ96CV9 577 aa16.05■□□□□ 0.16
CDK3-201ENST00000425876 GPRASP2Q96D09 838 aa16.05■□□□□ 0.16
CDK3-201ENST00000425876 PANK4Q9NVE7 773 aa16.05■□□□□ 0.16
CDK3-201ENST00000425876 INTS13Q9NVM9 706 aa16.05■□□□□ 0.16
CDK3-201ENST00000425876 RGL1Q9NZL6 768 aa16.05■□□□□ 0.16
CDK3-201ENST00000425876 ADD3Q9UEY8 706 aaKnown RBP16.05■□□□□ 0.16
CDK3-201ENST00000425876 PSMC6P62333 389 aa16.04■□□□□ 0.16
CDK3-201ENST00000425876 CYP4A11Q02928 519 aa16.04■□□□□ 0.16
CDK3-201ENST00000425876 FSTL1Q12841 308 aa16.04■□□□□ 0.16
CDK3-201ENST00000425876 MOGSQ13724 837 aa16.04■□□□□ 0.16
CDK3-201ENST00000425876 PLS1Q14651 629 aa16.04■□□□□ 0.16
CDK3-201ENST00000425876 FILIP1LQ4L180 1135 aa16.04■□□□□ 0.16
CDK3-201ENST00000425876 CHADLQ6NUI6 762 aa16.04■□□□□ 0.16
CDK3-201ENST00000425876 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.04■□□□□ 0.16
CDK3-201ENST00000425876 LRRC8AQ8IWT6 810 aa16.04■□□□□ 0.16
CDK3-201ENST00000425876 CCDC150Q8NCX0 1101 aa16.04■□□□□ 0.16
CDK3-201ENST00000425876 DNERQ8NFT8 737 aa16.04■□□□□ 0.16
CDK3-201ENST00000425876 CACTINQ8WUQ7 758 aaKnown RBP16.04■□□□□ 0.16
CDK3-201ENST00000425876 DYDC2Q96IM9 177 aa16.04■□□□□ 0.16
CDK3-201ENST00000425876 INPP4AQ96PE3 977 aaPredicted RBP16.04■□□□□ 0.16
CDK3-201ENST00000425876 NACC1Q96RE7 527 aa16.04■□□□□ 0.16
CDK3-201ENST00000425876 SLC39A2Q9NP94 309 aa16.04■□□□□ 0.16
CDK3-201ENST00000425876 CLEC11AQ9Y240 323 aa16.04■□□□□ 0.16
CDK3-201ENST00000425876 PFASO15067 1338 aa16.04■□□□□ 0.16
CDK3-201ENST00000425876 MYCLP12524 364 aaPredicted RBP16.04■□□□□ 0.16
CDK3-201ENST00000425876 EEF1GP26641 437 aaKnown RBP16.04■□□□□ 0.16
CDK3-201ENST00000425876 COPB2P35606 906 aa16.04■□□□□ 0.16
CDK3-201ENST00000425876 PMS1P54277 932 aaKnown RBP16.04■□□□□ 0.16
CDK3-201ENST00000425876 FKBP1BP68106 108 aa16.04■□□□□ 0.16
CDK3-201ENST00000425876 ITGB3BPQ13352 177 aaPredicted RBP16.04■□□□□ 0.16
CDK3-201ENST00000425876 HSP90AA4PQ58FG1 418 aa16.04■□□□□ 0.16
CDK3-201ENST00000425876 TCP11X2Q5H9J9 407 aa16.04■□□□□ 0.16
CDK3-201ENST00000425876 FAM26FQ5R3K3 315 aa16.04■□□□□ 0.16
CDK3-201ENST00000425876 MAP1SQ66K74 1059 aaPredicted RBP16.04■□□□□ 0.16
CDK3-201ENST00000425876 NLRX1Q86UT6 975 aa16.04■□□□□ 0.16
CDK3-201ENST00000425876 ZFP91Q96JP5 570 aaPredicted RBP16.04■□□□□ 0.16
CDK3-201ENST00000425876 TRIM47Q96LD4 638 aa16.04■□□□□ 0.16
CDK3-201ENST00000425876 IWS1Q96ST2 819 aa16.04■□□□□ 0.16
CDK3-201ENST00000425876 DUSP9Q99956 384 aaKnown RBP16.04■□□□□ 0.16
CDK3-201ENST00000425876 ASCC2Q9H1I8 757 aaPredicted RBP16.04■□□□□ 0.16
CDK3-201ENST00000425876 KCND2Q9NZV8 630 aa16.04■□□□□ 0.16
CDK3-201ENST00000425876 BTBD7Q9P203 1132 aa16.04■□□□□ 0.16
CDK3-201ENST00000425876 CHMP2AO43633 222 aa16.03■□□□□ 0.16
CDK3-201ENST00000425876 KIF20AO95235 890 aa16.03■□□□□ 0.16
CDK3-201ENST00000425876 P4HBP07237 508 aaKnown RBP16.03■□□□□ 0.16
CDK3-201ENST00000425876 HERVK_113P62684 666 aa16.03■□□□□ 0.16
CDK3-201ENST00000425876 LRRC63Q05C16 580 aa16.03■□□□□ 0.16
CDK3-201ENST00000425876 GIT2Q14161 759 aa16.03■□□□□ 0.16
CDK3-201ENST00000425876 CTTNQ14247 550 aaKnown RBP16.03■□□□□ 0.16
CDK3-201ENST00000425876 KRT31Q15323 416 aa16.03■□□□□ 0.16
CDK3-201ENST00000425876 MIER3Q7Z3K6 550 aa16.03■□□□□ 0.16
CDK3-201ENST00000425876 IRF2BP1Q8IU81 584 aa16.03■□□□□ 0.16
CDK3-201ENST00000425876 TPH2Q8IWU9 490 aa16.03■□□□□ 0.16
CDK3-201ENST00000425876 RDM1Q8NG50 284 aa16.03■□□□□ 0.16
CDK3-201ENST00000425876 KIAA1524Q8TCG1 905 aa16.03■□□□□ 0.16
CDK3-201ENST00000425876 CDHR1Q96JP9 859 aa16.03■□□□□ 0.16
CDK3-201ENST00000425876 SPATC1LQ9H0A9 340 aa16.03■□□□□ 0.16
CDK3-201ENST00000425876 BHMT2Q9H2M3 363 aa16.03■□□□□ 0.16
CDK3-201ENST00000425876 RTN4Q9NQC3 1192 aaKnown RBP16.03■□□□□ 0.16
CDK3-201ENST00000425876 PCDHA2Q9Y5H9 948 aa16.03■□□□□ 0.16
CDK3-201ENST00000425876 TRIM49BA6NDI0 452 aa16.02■□□□□ 0.16
CDK3-201ENST00000425876 KCNJ18B7U540 433 aa16.02■□□□□ 0.16
CDK3-201ENST00000425876 LYPLA2O95372 231 aa16.02■□□□□ 0.16
CDK3-201ENST00000425876 SLC25A27O95847 323 aa16.02■□□□□ 0.16
CDK3-201ENST00000425876 KRT18P05783 430 aaKnown RBP16.02■□□□□ 0.16
CDK3-201ENST00000425876 OSBPP22059 807 aa16.02■□□□□ 0.16
CDK3-201ENST00000425876 KRT76Q01546 638 aa16.02■□□□□ 0.16
CDK3-201ENST00000425876 SNAPC2Q13487 334 aa16.02■□□□□ 0.16
CDK3-201ENST00000425876 KCNJ12Q14500 433 aa16.02■□□□□ 0.16
CDK3-201ENST00000425876 SPECC1LQ69YQ0 1117 aa16.02■□□□□ 0.16
CDK3-201ENST00000425876 ANKRD40Q6AI12 368 aa16.02■□□□□ 0.16
CDK3-201ENST00000425876 FAM114A1Q8IWE2 563 aa16.02■□□□□ 0.16
CDK3-201ENST00000425876 MYOCDQ8IZQ8 938 aa16.02■□□□□ 0.16
CDK3-201ENST00000425876 CSGALNACT2Q8N6G5 542 aa16.02■□□□□ 0.16
CDK3-201ENST00000425876 HPS3Q969F9 1004 aa16.02■□□□□ 0.16
CDK3-201ENST00000425876 SLC10A4Q96EP9 437 aa16.02■□□□□ 0.16
CDK3-201ENST00000425876 PURBQ96QR8 312 aaKnown RBP16.02■□□□□ 0.16
CDK3-201ENST00000425876 SRRTQ9BXP5 876 aaKnown RBP16.02■□□□□ 0.16
CDK3-201ENST00000425876 SEMA6BQ9H3T3 888 aa16.02■□□□□ 0.16
CDK3-201ENST00000425876 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.02■□□□□ 0.16
CDK3-201ENST00000425876 FGFR1OPO95684 399 aaKnown RBP16.01■□□□□ 0.15
CDK3-201ENST00000425876 SFNP31947 248 aa16.01■□□□□ 0.15
CDK3-201ENST00000425876 PBX1P40424 430 aa16.01■□□□□ 0.15
CDK3-201ENST00000425876 JAK3P52333 1124 aa16.01■□□□□ 0.15
CDK3-201ENST00000425876 TBX2Q13207 712 aaPredicted RBP16.01■□□□□ 0.15
CDK3-201ENST00000425876 HERC4Q5GLZ8 1057 aaPredicted RBP16.01■□□□□ 0.15
CDK3-201ENST00000425876 GPAT2Q6NUI2 795 aa16.01■□□□□ 0.15
CDK3-201ENST00000425876 RINT1Q6NUQ1 792 aa16.01■□□□□ 0.15
CDK3-201ENST00000425876 SENP7Q9BQF6 1050 aa16.01■□□□□ 0.15
CDK3-201ENST00000425876 LXNQ9BS40 222 aa16.01■□□□□ 0.15
CDK3-201ENST00000425876 ZSWIM4Q9H7M6 989 aa16.01■□□□□ 0.15
CDK3-201ENST00000425876 TESPA1A2RU30 521 aaPredicted RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms