RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 POLD1P28340 1107 aa12.79□□□□□ -0.36
UBR4-207ENST00000425413 DNA2P51530 1060 aa12.79□□□□□ -0.36
UBR4-207ENST00000425413 POLR2FP61218 127 aaKnown RBP12.79□□□□□ -0.36
UBR4-207ENST00000425413 CC2D1AQ6P1N0 951 aaPredicted RBP12.79□□□□□ -0.36
UBR4-207ENST00000425413 CTAGE6Q86UF2 777 aa12.79□□□□□ -0.36
UBR4-207ENST00000425413 CTAGE4Q8IX94 777 aa12.79□□□□□ -0.36
UBR4-207ENST00000425413 CEP112Q8N8E3 955 aa12.79□□□□□ -0.36
UBR4-207ENST00000425413 RETREG2Q8NC44 543 aa12.79□□□□□ -0.36
UBR4-207ENST00000425413 ERMNQ8TAM6 284 aa12.79□□□□□ -0.36
UBR4-207ENST00000425413 LSM14BQ9BX40 385 aaKnown RBP12.79□□□□□ -0.36
UBR4-207ENST00000425413 SUGCTQ9HAC7 445 aa12.79□□□□□ -0.36
UBR4-207ENST00000425413 HOMER2Q9NSB8 354 aa12.79□□□□□ -0.36
UBR4-207ENST00000425413 HDAC9Q9UKV0 1011 aa12.79□□□□□ -0.36
UBR4-207ENST00000425413 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.79□□□□□ -0.369e-6■□□□□ 8.4
UBR4-207ENST00000425413 CLIC2O15247 247 aa12.78□□□□□ -0.36
UBR4-207ENST00000425413 EPS15P42566 896 aa12.78□□□□□ -0.36
UBR4-207ENST00000425413 KCNMA1Q12791 1236 aa12.78□□□□□ -0.36
UBR4-207ENST00000425413 ZCWPW2Q504Y3 356 aa12.78□□□□□ -0.36
UBR4-207ENST00000425413 KSR1Q8IVT5 923 aa12.78□□□□□ -0.36
UBR4-207ENST00000425413 CRYGNQ8WXF5 182 aa12.78□□□□□ -0.36
UBR4-207ENST00000425413 WDR18Q9BV38 432 aa12.78□□□□□ -0.36
UBR4-207ENST00000425413 IFIH1Q9BYX4 1025 aaKnown RBP12.78□□□□□ -0.36
UBR4-207ENST00000425413 JADE2Q9NQC1 790 aa12.78□□□□□ -0.36
UBR4-207ENST00000425413 ATRNL1Q5VV63 1379 aa12.78□□□□□ -0.36
UBR4-207ENST00000425413 NR2F2P24468 414 aa12.78□□□□□ -0.36
UBR4-207ENST00000425413 KIF11P52732 1056 aa12.78□□□□□ -0.36
UBR4-207ENST00000425413 GFPT1Q06210 699 aaPredicted RBP12.78□□□□□ -0.36
UBR4-207ENST00000425413 KIF5AQ12840 1032 aa12.78□□□□□ -0.36
UBR4-207ENST00000425413 GIT2Q14161 759 aa12.78□□□□□ -0.36
UBR4-207ENST00000425413 COBLL1Q53SF7 1204 aa12.78□□□□□ -0.36
UBR4-207ENST00000425413 HYIQ5T013 277 aa12.78□□□□□ -0.36
UBR4-207ENST00000425413 CPXCR1Q8N123 301 aa12.78□□□□□ -0.36
UBR4-207ENST00000425413 EIF2AK1Q9BQI3 630 aaKnown RBP12.78□□□□□ -0.36
UBR4-207ENST00000425413 ANKZF1Q9H8Y5 726 aa12.78□□□□□ -0.36
UBR4-207ENST00000425413 PCDHA2Q9Y5H9 948 aa12.78□□□□□ -0.36
UBR4-207ENST00000425413 MOCS3O95396 460 aa12.78□□□□□ -0.36
UBR4-207ENST00000425413 FOSP01100 380 aaPredicted RBP12.78□□□□□ -0.36
UBR4-207ENST00000425413 TCERG1LQ5VWI1 586 aa12.78□□□□□ -0.36
UBR4-207ENST00000425413 POTEAQ6S8J7 498 aa12.78□□□□□ -0.36
UBR4-207ENST00000425413 MAEAQ7L5Y9 396 aa12.78□□□□□ -0.36
UBR4-207ENST00000425413 FAM151AQ8WW52 585 aa12.78□□□□□ -0.36
UBR4-207ENST00000425413 CAMKK2Q96RR4 588 aa12.78□□□□□ -0.36
UBR4-207ENST00000425413 GOPCQ9HD26 462 aa12.78□□□□□ -0.36
UBR4-207ENST00000425413 ARFGAP3Q9NP61 516 aa12.78□□□□□ -0.36
UBR4-207ENST00000425413 HERC5Q9UII4 1024 aaKnown RBP12.78□□□□□ -0.36
UBR4-207ENST00000425413 PLAGL2Q9UPG8 496 aa12.78□□□□□ -0.36
UBR4-207ENST00000425413 ERICH4A6NGS2 130 aa12.77□□□□□ -0.36
UBR4-207ENST00000425413 EIF3CLB5ME19 914 aaKnown RBP12.77□□□□□ -0.36
UBR4-207ENST00000425413 ZRANB2O95218 330 aaKnown RBP eCLIP12.77□□□□□ -0.363e-7■■■■□ 20.9
UBR4-207ENST00000425413 GCNT3O95395 438 aa12.77□□□□□ -0.36
UBR4-207ENST00000425413 ACTN1P12814 892 aa12.77□□□□□ -0.36
UBR4-207ENST00000425413 RPA1P27694 616 aa12.77□□□□□ -0.36
UBR4-207ENST00000425413 PLA2G4AP47712 749 aa12.77□□□□□ -0.36
UBR4-207ENST00000425413 NAP1L1P55209 391 aaKnown RBP12.77□□□□□ -0.36
UBR4-207ENST00000425413 MRPS25P82663 173 aaKnown RBP12.77□□□□□ -0.36
UBR4-207ENST00000425413 DCAF17Q5H9S7 520 aaPredicted RBP12.77□□□□□ -0.36
UBR4-207ENST00000425413 LRCH2Q5VUJ6 765 aa12.77□□□□□ -0.36
UBR4-207ENST00000425413 CAGE1Q8TC20 777 aa12.77□□□□□ -0.36
UBR4-207ENST00000425413 DYDC2Q96IM9 177 aa12.77□□□□□ -0.36
UBR4-207ENST00000425413 AGBL1Q96MI9 1066 aa12.77□□□□□ -0.36
UBR4-207ENST00000425413 MBOAT7Q96N66 472 aa12.77□□□□□ -0.36
UBR4-207ENST00000425413 MMS19Q96T76 1030 aa12.77□□□□□ -0.36
UBR4-207ENST00000425413 EIF3CQ99613 913 aaKnown RBP12.77□□□□□ -0.36
UBR4-207ENST00000425413 ZCCHC17Q9NP64 241 aaKnown RBP12.77□□□□□ -0.36
UBR4-207ENST00000425413 TMX2Q9Y320 296 aa12.77□□□□□ -0.36
UBR4-207ENST00000425413 CNTNAP1P78357 1384 aa12.77□□□□□ -0.37
UBR4-207ENST00000425413 GCOM1H8Y6P7 765 aaPredicted RBP12.77□□□□□ -0.37
UBR4-207ENST00000425413 NPM3O75607 178 aaKnown RBP12.77□□□□□ -0.37
UBR4-207ENST00000425413 ZMYND10O75800 440 aa12.77□□□□□ -0.37
UBR4-207ENST00000425413 TBC1D8O95759 1140 aa12.77□□□□□ -0.37
UBR4-207ENST00000425413 EGFRP00533 1210 aa12.77□□□□□ -0.37
UBR4-207ENST00000425413 POLR2MP0CAP2 368 aa12.77□□□□□ -0.37
UBR4-207ENST00000425413 CXCR5P32302 372 aa12.77□□□□□ -0.37
UBR4-207ENST00000425413 AMPD2Q01433 879 aa12.77□□□□□ -0.37
UBR4-207ENST00000425413 RAPGEF1Q13905 1077 aa12.77□□□□□ -0.37
UBR4-207ENST00000425413 PLS1Q14651 629 aa12.77□□□□□ -0.37
UBR4-207ENST00000425413 Q4G0T1 1027 aa12.77□□□□□ -0.37
UBR4-207ENST00000425413 DNAAF5Q86Y56 855 aa12.77□□□□□ -0.37
UBR4-207ENST00000425413 VAV3Q9UKW4 847 aa12.77□□□□□ -0.37
UBR4-207ENST00000425413 RABGAP1Q9Y3P9 1069 aa12.77□□□□□ -0.37
UBR4-207ENST00000425413 PCDHA13Q9Y5I0 950 aa12.77□□□□□ -0.37
UBR4-207ENST00000425413 CAPN6Q9Y6Q1 641 aa12.77□□□□□ -0.37
UBR4-207ENST00000425413 BUB1O43683 1085 aa12.76□□□□□ -0.37
UBR4-207ENST00000425413 TBCAO75347 108 aaKnown RBP12.76□□□□□ -0.37
UBR4-207ENST00000425413 GABPB1Q06547 395 aaPredicted RBP12.76□□□□□ -0.37
UBR4-207ENST00000425413 CCDC170Q8IYT3 715 aa12.76□□□□□ -0.37
UBR4-207ENST00000425413 BAP1Q92560 729 aa12.76□□□□□ -0.37
UBR4-207ENST00000425413 SH2D3AQ9BRG2 576 aa12.76□□□□□ -0.37
UBR4-207ENST00000425413 ZNF341Q9BYN7 854 aa12.76□□□□□ -0.37
UBR4-207ENST00000425413 KCTD10Q9H3F6 313 aa12.76□□□□□ -0.37
UBR4-207ENST00000425413 SAR1BQ9Y6B6 198 aa12.76□□□□□ -0.37
UBR4-207ENST00000425413 ABCB11O95342 1321 aa12.76□□□□□ -0.37
UBR4-207ENST00000425413 VIL1P09327 827 aaKnown RBP12.76□□□□□ -0.37
UBR4-207ENST00000425413 ARP10275 920 aa12.76□□□□□ -0.37
UBR4-207ENST00000425413 VAV2P52735 878 aa12.76□□□□□ -0.37
UBR4-207ENST00000425413 RASSF7Q02833 373 aa12.76□□□□□ -0.37
UBR4-207ENST00000425413 ZC2HC1CQ53FD0 456 aaPredicted RBP12.76□□□□□ -0.37
UBR4-207ENST00000425413 BTNL9Q6UXG8 535 aa12.76□□□□□ -0.37
UBR4-207ENST00000425413 SECISBP2LQ93073 1101 aaKnown RBP12.76□□□□□ -0.37
UBR4-207ENST00000425413 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms