RNA–Protein interactions for RNA: ENST00000424011.6

CMTM3-202, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CMTM3, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-202ENST00000424011 TSG101Q99816 390 aa18.35■□□□□ 0.53
CMTM3-202ENST00000424011 EMILIN3Q9NT22 766 aa18.35■□□□□ 0.53
CMTM3-202ENST00000424011 A0A1W2PQC6 194 aa18.34■□□□□ 0.53
CMTM3-202ENST00000424011 POTEFA5A3E0 1075 aa18.34■□□□□ 0.53
CMTM3-202ENST00000424011 RNF225M0QZC1 329 aaPredicted RBP18.34■□□□□ 0.53
CMTM3-202ENST00000424011 SLU7O95391 586 aaKnown RBP18.34■□□□□ 0.53
CMTM3-202ENST00000424011 KRT18P05783 430 aaKnown RBP18.34■□□□□ 0.53
CMTM3-202ENST00000424011 POTEIP0CG38 1075 aa18.34■□□□□ 0.53
CMTM3-202ENST00000424011 CYP11B2P19099 503 aa18.34■□□□□ 0.53
CMTM3-202ENST00000424011 SLC12A3P55017 1021 aa18.34■□□□□ 0.53
CMTM3-202ENST00000424011 SPP2Q13103 211 aa18.34■□□□□ 0.53
CMTM3-202ENST00000424011 PPP2R5CQ13362 524 aa18.34■□□□□ 0.53
CMTM3-202ENST00000424011 BMS1Q14692 1282 aaKnown RBP18.34■□□□□ 0.53
CMTM3-202ENST00000424011 POTEGQ6S5H5 508 aa18.34■□□□□ 0.53
CMTM3-202ENST00000424011 POTEEQ6S8J3 1075 aa18.34■□□□□ 0.53
CMTM3-202ENST00000424011 SYT2Q8N9I0 419 aaPredicted RBP18.34■□□□□ 0.53
CMTM3-202ENST00000424011 SLC5A5Q92911 643 aa18.34■□□□□ 0.53
CMTM3-202ENST00000424011 SECISBP2LQ93073 1101 aaKnown RBP18.34■□□□□ 0.53
CMTM3-202ENST00000424011 HPS3Q969F9 1004 aa18.34■□□□□ 0.53
CMTM3-202ENST00000424011 WDR11Q9BZH6 1224 aa18.34■□□□□ 0.53
CMTM3-202ENST00000424011 RPAP3Q9H6T3 665 aaPredicted RBP18.34■□□□□ 0.53
CMTM3-202ENST00000424011 SPATA31C1P0DKV0 1188 aa18.34■□□□□ 0.53
CMTM3-202ENST00000424011 PTPRAP18433 802 aa18.34■□□□□ 0.53
CMTM3-202ENST00000424011 MUTP22033 750 aa18.34■□□□□ 0.53
CMTM3-202ENST00000424011 TNNT3P45378 269 aaPredicted RBP18.34■□□□□ 0.53
CMTM3-202ENST00000424011 DNM2P50570 870 aa18.34■□□□□ 0.53
CMTM3-202ENST00000424011 SUPT20HL1Q3ZLR7 823 aa18.34■□□□□ 0.53
CMTM3-202ENST00000424011 FAM26FQ5R3K3 315 aa18.34■□□□□ 0.53
CMTM3-202ENST00000424011 MYOCDQ8IZQ8 938 aa18.34■□□□□ 0.53
CMTM3-202ENST00000424011 EIF2AK1Q9BQI3 630 aaKnown RBP18.34■□□□□ 0.53
CMTM3-202ENST00000424011 TUBGCP2Q9BSJ2 902 aa18.34■□□□□ 0.53
CMTM3-202ENST00000424011 SEMA6BQ9H3T3 888 aa18.34■□□□□ 0.53
CMTM3-202ENST00000424011 TUFT1Q9NNX1 390 aa18.34■□□□□ 0.53
CMTM3-202ENST00000424011 GEMIN8Q9NWZ8 242 aaKnown RBP18.34■□□□□ 0.53
CMTM3-202ENST00000424011 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.34■□□□□ 0.53
CMTM3-202ENST00000424011 V9GYY5 206 aaPredicted RBP18.34■□□□□ 0.53
CMTM3-202ENST00000424011 ZC3H4Q9UPT8 1303 aaKnown RBP18.34■□□□□ 0.53
CMTM3-202ENST00000424011 C19orf81C9J6K1 198 aa18.33■□□□□ 0.53
CMTM3-202ENST00000424011 MEIS1O00470 390 aa18.33■□□□□ 0.53
CMTM3-202ENST00000424011 PSMD10O75832 226 aa18.33■□□□□ 0.53
CMTM3-202ENST00000424011 OTOP1Q7RTM1 612 aa18.33■□□□□ 0.53
CMTM3-202ENST00000424011 MB21D1Q8N884 522 aa18.33■□□□□ 0.53
CMTM3-202ENST00000424011 CLEC4DQ8WXI8 215 aa18.33■□□□□ 0.53
CMTM3-202ENST00000424011 ZNF446Q9NWS9 450 aa18.33■□□□□ 0.53
CMTM3-202ENST00000424011 GOLGA6L9A6NEM1 432 aa18.33■□□□□ 0.52
CMTM3-202ENST00000424011 GAS7O60861 476 aa18.33■□□□□ 0.52
CMTM3-202ENST00000424011 ELF2Q15723 593 aa18.33■□□□□ 0.52
CMTM3-202ENST00000424011 CPXCR1Q8N123 301 aa18.33■□□□□ 0.52
CMTM3-202ENST00000424011 CNOT6LQ96LI5 555 aaKnown RBP18.33■□□□□ 0.52
CMTM3-202ENST00000424011 ZNF577Q9BSK1 485 aa18.33■□□□□ 0.52
CMTM3-202ENST00000424011 MRPL44Q9H9J2 332 aaKnown RBP18.33■□□□□ 0.52
CMTM3-202ENST00000424011 ALAS1P13196 640 aa18.32■□□□□ 0.52
CMTM3-202ENST00000424011 MUM1L1Q5H9M0 696 aa18.32■□□□□ 0.52
CMTM3-202ENST00000424011 NIPA1Q7RTP0 329 aa18.32■□□□□ 0.52
CMTM3-202ENST00000424011 EEF2KMTQ96G04 330 aa18.32■□□□□ 0.52
CMTM3-202ENST00000424011 C12orf42Q96LP6 360 aa18.32■□□□□ 0.52
CMTM3-202ENST00000424011 MXRA8Q9BRK3 442 aa18.32■□□□□ 0.52
CMTM3-202ENST00000424011 RAVER2Q9HCJ3 691 aaKnown RBP18.32■□□□□ 0.52
CMTM3-202ENST00000424011 RPTORQ8N122 1335 aa18.32■□□□□ 0.52
CMTM3-202ENST00000424011 FRMD3A2A2Y4 597 aa18.32■□□□□ 0.52
CMTM3-202ENST00000424011 GLTPD2A6NH11 291 aa18.32■□□□□ 0.52
CMTM3-202ENST00000424011 PES1O00541 588 aaKnown RBP18.32■□□□□ 0.52
CMTM3-202ENST00000424011 BCRP11274 1271 aa18.32■□□□□ 0.52
CMTM3-202ENST00000424011 FECHP22830 423 aa18.32■□□□□ 0.52
CMTM3-202ENST00000424011 MTIF2P46199 727 aaKnown RBP18.32■□□□□ 0.52
CMTM3-202ENST00000424011 HERC4Q5GLZ8 1057 aaPredicted RBP18.32■□□□□ 0.52
CMTM3-202ENST00000424011 LRRN4CLQ8ND94 238 aa18.32■□□□□ 0.52
CMTM3-202ENST00000424011 ZKSCAN4Q969J2 545 aaPredicted RBP18.32■□□□□ 0.52
CMTM3-202ENST00000424011 RIT2Q99578 217 aa18.32■□□□□ 0.52
CMTM3-202ENST00000424011 ADGRG1Q9Y653 693 aa18.32■□□□□ 0.52
CMTM3-202ENST00000424011 NFIBO00712 420 aa18.31■□□□□ 0.52
CMTM3-202ENST00000424011 CCDC175P0C221 793 aa18.31■□□□□ 0.52
CMTM3-202ENST00000424011 ZNF507Q8TCN5 953 aa18.31■□□□□ 0.52
CMTM3-202ENST00000424011 DCPSQ96C86 337 aaKnown RBP18.31■□□□□ 0.52
CMTM3-202ENST00000424011 KLRG1Q96E93 195 aa18.31■□□□□ 0.52
CMTM3-202ENST00000424011 WDR24Q96S15 920 aa18.31■□□□□ 0.52
CMTM3-202ENST00000424011 HSD17B14Q9BPX1 270 aa18.31■□□□□ 0.52
CMTM3-202ENST00000424011 RASSF4Q9H2L5 321 aa18.31■□□□□ 0.52
CMTM3-202ENST00000424011 ABHD10Q9NUJ1 306 aa18.31■□□□□ 0.52
CMTM3-202ENST00000424011 RSPH14Q9UHP6 348 aa18.31■□□□□ 0.52
CMTM3-202ENST00000424011 EYA4O95677 639 aa18.31■□□□□ 0.52
CMTM3-202ENST00000424011 GNG11P61952 73 aa18.31■□□□□ 0.52
CMTM3-202ENST00000424011 UBXN2AP68543 259 aa18.31■□□□□ 0.52
CMTM3-202ENST00000424011 NOL9Q5SY16 702 aaKnown RBP18.31■□□□□ 0.52
CMTM3-202ENST00000424011 USP50Q70EL3 339 aaPredicted RBP18.31■□□□□ 0.52
CMTM3-202ENST00000424011 TEKT3Q9BXF9 490 aa18.31■□□□□ 0.52
CMTM3-202ENST00000424011 ZHX2Q9Y6X8 837 aa18.31■□□□□ 0.52
CMTM3-202ENST00000424011 DOCK1Q14185 1865 aa18.3■□□□□ 0.52
CMTM3-202ENST00000424011 A0A0U1RQJ8 604 aa18.3■□□□□ 0.52
CMTM3-202ENST00000424011 VWA5AO00534 786 aa18.3■□□□□ 0.52
CMTM3-202ENST00000424011 ERVK-24P63145 666 aa18.3■□□□□ 0.52
CMTM3-202ENST00000424011 PABPC4Q13310 644 aaKnown RBP eCLIP18.3■□□□□ 0.521e-6■□□□□ 9.5
CMTM3-202ENST00000424011 ARSHQ5FYA8 562 aa18.3■□□□□ 0.52
CMTM3-202ENST00000424011 FKBP15Q5T1M5 1219 aa18.3■□□□□ 0.52
CMTM3-202ENST00000424011 RETREG2Q8NC44 543 aa18.3■□□□□ 0.52
CMTM3-202ENST00000424011 ATRIPQ8WXE1 791 aa18.3■□□□□ 0.52
CMTM3-202ENST00000424011 NOC4LQ9BVI4 516 aaKnown RBP18.3■□□□□ 0.52
CMTM3-202ENST00000424011 NUP58Q9BVL2 599 aa18.3■□□□□ 0.52
CMTM3-202ENST00000424011 IPO5O00410 1097 aaKnown RBP18.29■□□□□ 0.52
CMTM3-202ENST00000424011 EML1O00423 815 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms