RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 DDX25Q9UHL0 483 aaKnown RBP20.92■□□□□ 0.94
HDAC6-205ENST00000423941 ATP11BQ9Y2G3 1177 aa20.92■□□□□ 0.94
HDAC6-205ENST00000423941 ZNF286BP0CG31 522 aa20.91■□□□□ 0.94
HDAC6-205ENST00000423941 HOXC8P31273 242 aa20.91■□□□□ 0.94
HDAC6-205ENST00000423941 PSEN2P49810 448 aa20.91■□□□□ 0.94
HDAC6-205ENST00000423941 ZNF746Q6NUN9 644 aaPredicted RBP20.91■□□□□ 0.94
HDAC6-205ENST00000423941 EMSYQ7Z589 1322 aa20.91■□□□□ 0.94
HDAC6-205ENST00000423941 C7orf61Q8IZ16 206 aa20.91■□□□□ 0.94
HDAC6-205ENST00000423941 FAM20AQ96MK3 541 aa20.91■□□□□ 0.94
HDAC6-205ENST00000423941 PDLIM7Q9NR12 457 aa20.91■□□□□ 0.94
HDAC6-205ENST00000423941 DCDC2CA8MYV0 355 aa20.9■□□□□ 0.94
HDAC6-205ENST00000423941 CCNT1O60563 726 aaKnown RBP20.9■□□□□ 0.94
HDAC6-205ENST00000423941 MFSD10Q14728 455 aa20.9■□□□□ 0.94
HDAC6-205ENST00000423941 KIAA0753Q2KHM9 967 aa20.9■□□□□ 0.94
HDAC6-205ENST00000423941 LARP1BQ659C4 914 aaKnown RBP20.9■□□□□ 0.94
HDAC6-205ENST00000423941 HAS1Q92839 578 aa20.9■□□□□ 0.94
HDAC6-205ENST00000423941 TBX21Q9UL17 535 aa20.9■□□□□ 0.94
HDAC6-205ENST00000423941 TRIP12Q14669 1992 aaPredicted RBP20.89■□□□□ 0.93
HDAC6-205ENST00000423941 H0YGN5 161 aa20.89■□□□□ 0.93
HDAC6-205ENST00000423941 KIAA0355O15063 1070 aa20.89■□□□□ 0.93
HDAC6-205ENST00000423941 B4GALT4O60513 344 aa20.89■□□□□ 0.93
HDAC6-205ENST00000423941 TRAPPC10P48553 1259 aa20.89■□□□□ 0.93
HDAC6-205ENST00000423941 KRT76Q01546 638 aa20.89■□□□□ 0.93
HDAC6-205ENST00000423941 SP4Q02446 784 aa20.89■□□□□ 0.93
HDAC6-205ENST00000423941 PLPPR4Q7Z2D5 763 aa20.89■□□□□ 0.93
HDAC6-205ENST00000423941 SH3RF1Q7Z6J0 888 aa20.89■□□□□ 0.93
HDAC6-205ENST00000423941 CTAGE1Q96RT6 745 aa20.89■□□□□ 0.93
HDAC6-205ENST00000423941 SMARCAD1Q9H4L7 1026 aa20.89■□□□□ 0.93
HDAC6-205ENST00000423941 GTF2IRD1Q9UHL9 959 aa20.89■□□□□ 0.93
HDAC6-205ENST00000423941 LTBP2Q14767 1821 aa20.89■□□□□ 0.93
HDAC6-205ENST00000423941 MYH9P35579 1960 aaKnown RBP20.88■□□□□ 0.93
HDAC6-205ENST00000423941 TRIM43BA6NCK2 446 aa20.88■□□□□ 0.93
HDAC6-205ENST00000423941 PQBP1O60828 265 aaKnown RBP20.88■□□□□ 0.93
HDAC6-205ENST00000423941 CLTBP09497 229 aa20.88■□□□□ 0.93
HDAC6-205ENST00000423941 TOB1P50616 345 aaPredicted RBP20.88■□□□□ 0.93
HDAC6-205ENST00000423941 ADAM17P78536 824 aa20.88■□□□□ 0.93
HDAC6-205ENST00000423941 ORC2Q13416 577 aaPredicted RBP20.88■□□□□ 0.93
HDAC6-205ENST00000423941 LRCH2Q5VUJ6 765 aa20.88■□□□□ 0.93
HDAC6-205ENST00000423941 TRIM50Q86XT4 487 aa20.88■□□□□ 0.93
HDAC6-205ENST00000423941 HSCBQ8IWL3 235 aa20.88■□□□□ 0.93
HDAC6-205ENST00000423941 SMAP1Q8IYB5 467 aaPredicted RBP20.88■□□□□ 0.93
HDAC6-205ENST00000423941 AFAP1L1Q8TED9 768 aa20.88■□□□□ 0.93
HDAC6-205ENST00000423941 GJA10Q969M2 543 aa20.88■□□□□ 0.93
HDAC6-205ENST00000423941 TRIM43Q96BQ3 446 aaPredicted RBP20.88■□□□□ 0.93
HDAC6-205ENST00000423941 MTMR9Q96QG7 549 aa20.88■□□□□ 0.93
HDAC6-205ENST00000423941 UIMC1Q96RL1 719 aa20.88■□□□□ 0.93
HDAC6-205ENST00000423941 RNPEPQ9H4A4 650 aa20.88■□□□□ 0.93
HDAC6-205ENST00000423941 HDAC6Q9UBN7 1215 aa20.88■□□□□ 0.93
HDAC6-205ENST00000423941 DDX39AO00148 427 aaKnown RBP20.87■□□□□ 0.93
HDAC6-205ENST00000423941 GAS7O60861 476 aa20.87■□□□□ 0.93
HDAC6-205ENST00000423941 SUPT20HL2P0C7V6 817 aa20.87■□□□□ 0.93
HDAC6-205ENST00000423941 PDCP20941 246 aa20.87■□□□□ 0.93
HDAC6-205ENST00000423941 HIC1Q14526 733 aa20.87■□□□□ 0.93
HDAC6-205ENST00000423941 UTP14CQ5TAP6 766 aaKnown RBP20.87■□□□□ 0.93
HDAC6-205ENST00000423941 GDF6Q6KF10 455 aaPredicted RBP20.87■□□□□ 0.93
HDAC6-205ENST00000423941 RDM1Q8NG50 284 aa20.87■□□□□ 0.93
HDAC6-205ENST00000423941 TEKT3Q9BXF9 490 aa20.87■□□□□ 0.93
HDAC6-205ENST00000423941 TRPV6Q9H1D0 765 aa20.87■□□□□ 0.93
HDAC6-205ENST00000423941 ERAP1Q9NZ08 941 aa20.87■□□□□ 0.93
HDAC6-205ENST00000423941 VAV3Q9UKW4 847 aa20.87■□□□□ 0.93
HDAC6-205ENST00000423941 PCDHA10Q9Y5I2 948 aa20.87■□□□□ 0.93
HDAC6-205ENST00000423941 MAFBQ9Y5Q3 323 aaPredicted RBP20.87■□□□□ 0.93
HDAC6-205ENST00000423941 KAT6AQ92794 2004 aa20.87■□□□□ 0.93
HDAC6-205ENST00000423941 TLR3O15455 904 aaKnown RBP20.86■□□□□ 0.93
HDAC6-205ENST00000423941 SLC26A2P50443 739 aa20.86■□□□□ 0.93
HDAC6-205ENST00000423941 SPIRE1Q08AE8 756 aa20.86■□□□□ 0.93
HDAC6-205ENST00000423941 PPP2R5CQ13362 524 aa20.86■□□□□ 0.93
HDAC6-205ENST00000423941 POTEDQ86YR6 584 aa20.86■□□□□ 0.93
HDAC6-205ENST00000423941 PPP1R13LQ8WUF5 828 aa20.86■□□□□ 0.93
HDAC6-205ENST00000423941 UNC45AQ9H3U1 944 aa20.86■□□□□ 0.93
HDAC6-205ENST00000423941 ZNF215Q9UL58 517 aaPredicted RBP20.86■□□□□ 0.93
HDAC6-205ENST00000423941 H3BQV1 296 aa20.85■□□□□ 0.93
HDAC6-205ENST00000423941 SYT1P21579 422 aa20.85■□□□□ 0.93
HDAC6-205ENST00000423941 ITGB8P26012 769 aa20.85■□□□□ 0.93
HDAC6-205ENST00000423941 SFNP31947 248 aa20.85■□□□□ 0.93
HDAC6-205ENST00000423941 STAT5BP51692 787 aa20.85■□□□□ 0.93
HDAC6-205ENST00000423941 MIS18BP1Q6P0N0 1132 aa20.85■□□□□ 0.93
HDAC6-205ENST00000423941 CCDC60Q8IWA6 550 aaPredicted RBP20.85■□□□□ 0.93
HDAC6-205ENST00000423941 SLFN12Q8IYM2 578 aa20.85■□□□□ 0.93
HDAC6-205ENST00000423941 C7orf31Q8N865 590 aa20.85■□□□□ 0.93
HDAC6-205ENST00000423941 C4orf32Q8N8J7 132 aa20.85■□□□□ 0.93
HDAC6-205ENST00000423941 TRMT13Q9NUP7 481 aaKnown RBP20.85■□□□□ 0.93
HDAC6-205ENST00000423941 TMEM39AQ9NV64 488 aa20.85■□□□□ 0.93
HDAC6-205ENST00000423941 ZMYND8Q9ULU4 1186 aaPredicted RBP20.85■□□□□ 0.93
HDAC6-205ENST00000423941 WDR64B1ANS9 1081 aa20.84■□□□□ 0.93
HDAC6-205ENST00000423941 SMIM10L2AP0DMW4 78 aa20.84■□□□□ 0.93
HDAC6-205ENST00000423941 SMIM10L2BP0DMW5 78 aa20.84■□□□□ 0.93
HDAC6-205ENST00000423941 ATP4AP20648 1035 aa20.84■□□□□ 0.93
HDAC6-205ENST00000423941 PRPF38BQ5VTL8 546 aaKnown RBP20.84■□□□□ 0.93
HDAC6-205ENST00000423941 GLG1Q92896 1179 aa20.84■□□□□ 0.93
HDAC6-205ENST00000423941 GDF15Q99988 308 aa20.84■□□□□ 0.93
HDAC6-205ENST00000423941 TMEM60Q9H2L4 133 aa20.84■□□□□ 0.93
HDAC6-205ENST00000423941 PRO3102Q9H379 93 aa20.84■□□□□ 0.93
HDAC6-205ENST00000423941 DISC1Q9NRI5 854 aa20.84■□□□□ 0.93
HDAC6-205ENST00000423941 NEMFO60524 1076 aa20.83■□□□□ 0.93
HDAC6-205ENST00000423941 PSAPP07602 524 aa20.83■□□□□ 0.93
HDAC6-205ENST00000423941 SYN1P17600 705 aa20.83■□□□□ 0.93
HDAC6-205ENST00000423941 JAK3P52333 1124 aa20.83■□□□□ 0.93
HDAC6-205ENST00000423941 RBL2Q08999 1139 aa20.83■□□□□ 0.93
HDAC6-205ENST00000423941 GNL2Q13823 731 aaKnown RBP20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms