RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 TSTD1Q8NFU3 115 aa3.94□□□□□ -1.78
TOP2A-201ENST00000423485 TGFBRAP1Q8WUH2 860 aa3.94□□□□□ -1.78
TOP2A-201ENST00000423485 MRPS31Q92665 395 aaKnown RBP3.94□□□□□ -1.78
TOP2A-201ENST00000423485 FAM89AQ96GI7 184 aa3.94□□□□□ -1.78
TOP2A-201ENST00000423485 KANSL3Q9P2N6 904 aa3.94□□□□□ -1.78
TOP2A-201ENST00000423485 ZBTB1Q9Y2K1 713 aa3.94□□□□□ -1.78
TOP2A-201ENST00000423485 PXDNQ92626 1479 aa3.94□□□□□ -1.78
TOP2A-201ENST00000423485 LAMB4A4D0S4 1761 aa3.93□□□□□ -1.78
TOP2A-201ENST00000423485 A6NCN8 305 aa3.93□□□□□ -1.78
TOP2A-201ENST00000423485 RRN3P2A6NIE6 340 aa3.93□□□□□ -1.78
TOP2A-201ENST00000423485 RASGRP1O95267 797 aa3.93□□□□□ -1.78
TOP2A-201ENST00000423485 GJB6O95452 261 aa3.93□□□□□ -1.78
TOP2A-201ENST00000423485 SSR1P43307 286 aaKnown RBP3.93□□□□□ -1.78
TOP2A-201ENST00000423485 CCDC14Q49A88 953 aa3.93□□□□□ -1.78
TOP2A-201ENST00000423485 ANO1Q5XXA6 986 aa3.93□□□□□ -1.78
TOP2A-201ENST00000423485 TBC1D9BQ66K14 1250 aa3.93□□□□□ -1.78
TOP2A-201ENST00000423485 CAND1Q86VP6 1230 aaKnown RBP3.93□□□□□ -1.78
TOP2A-201ENST00000423485 APOL5Q9BWW9 433 aa3.93□□□□□ -1.78
TOP2A-201ENST00000423485 KCNH6Q9H252 994 aa3.93□□□□□ -1.78
TOP2A-201ENST00000423485 SEPT11Q9NVA2 429 aaKnown RBP3.93□□□□□ -1.78
TOP2A-201ENST00000423485 MAGEC2Q9UBF1 373 aaPredicted RBP3.93□□□□□ -1.78
TOP2A-201ENST00000423485 FEM1BQ9UK73 627 aa3.93□□□□□ -1.78
TOP2A-201ENST00000423485 STXBP5LQ9Y2K9 1186 aa3.93□□□□□ -1.78
TOP2A-201ENST00000423485 ZBTB12Q9Y330 459 aaPredicted RBP3.93□□□□□ -1.78
TOP2A-201ENST00000423485 GAKO14976 1311 aa3.93□□□□□ -1.78
TOP2A-201ENST00000423485 SPDYE16A6NNV3 312 aaPredicted RBP3.93□□□□□ -1.78
TOP2A-201ENST00000423485 H3BUI4 141 aa3.93□□□□□ -1.78
TOP2A-201ENST00000423485 HEXIM1O94992 359 aaKnown RBP3.93□□□□□ -1.78
TOP2A-201ENST00000423485 ATXN8OSP0DMR3 200 aa3.93□□□□□ -1.78
TOP2A-201ENST00000423485 PPP2R2BQ00005 443 aa3.93□□□□□ -1.78
TOP2A-201ENST00000423485 PTPN12Q05209 780 aaKnown RBP3.93□□□□□ -1.78
TOP2A-201ENST00000423485 NKX1-1Q15270 411 aaPredicted RBP3.93□□□□□ -1.78
TOP2A-201ENST00000423485 SPDYE2Q495Y8 402 aa3.93□□□□□ -1.78
TOP2A-201ENST00000423485 MAPKAPK5Q8IW41 473 aa3.93□□□□□ -1.78
TOP2A-201ENST00000423485 TTC30BQ8N4P2 665 aa3.93□□□□□ -1.78
TOP2A-201ENST00000423485 MYL10Q9BUA6 226 aa3.93□□□□□ -1.78
TOP2A-201ENST00000423485 KANSL2Q9H9L4 492 aa3.93□□□□□ -1.78
TOP2A-201ENST00000423485 ZCCHC17Q9NP64 241 aaKnown RBP3.93□□□□□ -1.78
TOP2A-201ENST00000423485 V9GY48 417 aaPredicted RBP3.93□□□□□ -1.78
TOP2A-201ENST00000423485 POLRMTO00411 1230 aaKnown RBP3.93□□□□□ -1.78
TOP2A-201ENST00000423485 OPHN1O60890 802 aa3.93□□□□□ -1.78
TOP2A-201ENST00000423485 LMNAP02545 664 aaKnown RBP3.93□□□□□ -1.78
TOP2A-201ENST00000423485 CYP2E1P05181 493 aaPredicted RBP3.93□□□□□ -1.78
TOP2A-201ENST00000423485 ZNF853P0CG23 659 aa3.93□□□□□ -1.78
TOP2A-201ENST00000423485 HARSP12081 509 aaKnown RBP3.93□□□□□ -1.78
TOP2A-201ENST00000423485 ELNP15502 786 aa3.93□□□□□ -1.78
TOP2A-201ENST00000423485 ERCC3P19447 782 aa3.93□□□□□ -1.78
TOP2A-201ENST00000423485 AVPR1AP37288 418 aa3.93□□□□□ -1.78
TOP2A-201ENST00000423485 PIP4K2AP48426 406 aaPredicted RBP3.93□□□□□ -1.78
TOP2A-201ENST00000423485 HNRNPUQ00839 825 aaKnown RBP eCLIP3.93□□□□□ -1.78
TOP2A-201ENST00000423485 TBC1D25Q3MII6 688 aa3.93□□□□□ -1.78
TOP2A-201ENST00000423485 PDZD4Q76G19 769 aaPredicted RBP3.93□□□□□ -1.78
TOP2A-201ENST00000423485 TRIM48Q8IWZ4 208 aa3.93□□□□□ -1.78
TOP2A-201ENST00000423485 MMTAG2Q9BU76 263 aaKnown RBP3.93□□□□□ -1.78
TOP2A-201ENST00000423485 YIPF2Q9BWQ6 316 aa3.93□□□□□ -1.78
TOP2A-201ENST00000423485 FTHL17Q9BXU8 183 aa3.93□□□□□ -1.78
TOP2A-201ENST00000423485 GTPBP4Q9BZE4 634 aaKnown RBP3.93□□□□□ -1.78
TOP2A-201ENST00000423485 CNNM2Q9H8M5 875 aa3.93□□□□□ -1.78
TOP2A-201ENST00000423485 SFMBT1Q9UHJ3 866 aa3.93□□□□□ -1.78
TOP2A-201ENST00000423485 CPSF3Q9UKF6 684 aaKnown RBP3.93□□□□□ -1.78
TOP2A-201ENST00000423485 ANGPTL2Q9UKU9 493 aa3.93□□□□□ -1.78
TOP2A-201ENST00000423485 USP42Q9H9J4 1324 aaKnown RBP3.93□□□□□ -1.78
TOP2A-201ENST00000423485 SLC9A3R1O14745 358 aaPredicted RBP3.93□□□□□ -1.78
TOP2A-201ENST00000423485 PPFIA2O75334 1257 aa3.93□□□□□ -1.78
TOP2A-201ENST00000423485 ZFYP08048 801 aaPredicted RBP3.93□□□□□ -1.78
TOP2A-201ENST00000423485 SLC10A3P09131 477 aa3.93□□□□□ -1.78
TOP2A-201ENST00000423485 EN2P19622 333 aaPredicted RBP3.93□□□□□ -1.78
TOP2A-201ENST00000423485 VARSP26640 1264 aaKnown RBP3.93□□□□□ -1.78
TOP2A-201ENST00000423485 MAGEA9P43362 315 aa3.93□□□□□ -1.78
TOP2A-201ENST00000423485 LMAN2Q12907 356 aa3.93□□□□□ -1.78
TOP2A-201ENST00000423485 CPA6Q8N4T0 437 aa3.93□□□□□ -1.78
TOP2A-201ENST00000423485 MTMR14Q8NCE2 650 aa3.93□□□□□ -1.78
TOP2A-201ENST00000423485 ATP6V0A1Q93050 837 aa3.93□□□□□ -1.78
TOP2A-201ENST00000423485 YY1AP1Q9H869 796 aa3.93□□□□□ -1.78
TOP2A-201ENST00000423485 STIM2Q9P246 746 aa3.93□□□□□ -1.78
TOP2A-201ENST00000423485 PCDHB8Q9UN66 801 aa3.93□□□□□ -1.78
TOP2A-201ENST00000423485 MRPS23Q9Y3D9 190 aaKnown RBP3.93□□□□□ -1.78
TOP2A-201ENST00000423485 NF1P21359 2839 aa3.93□□□□□ -1.78
TOP2A-201ENST00000423485 ZANQ9Y493 2812 aa3.93□□□□□ -1.78
TOP2A-201ENST00000423485 PITPNM2Q9BZ72 1349 aa3.93□□□□□ -1.78
TOP2A-201ENST00000423485 ZNF233A6NK53 670 aa3.93□□□□□ -1.78
TOP2A-201ENST00000423485 TTLL13PA6NNM8 815 aa3.93□□□□□ -1.78
TOP2A-201ENST00000423485 USP27XA6NNY8 438 aa3.93□□□□□ -1.78
TOP2A-201ENST00000423485 VPS4BO75351 444 aa3.93□□□□□ -1.78
TOP2A-201ENST00000423485 TP53P04637 393 aaPredicted RBP3.93□□□□□ -1.78
TOP2A-201ENST00000423485 TXNP10599 105 aaKnown RBP3.93□□□□□ -1.78
TOP2A-201ENST00000423485 NOS2P35228 1153 aa3.93□□□□□ -1.78
TOP2A-201ENST00000423485 FBXW4P57775 412 aa3.93□□□□□ -1.78
TOP2A-201ENST00000423485 YWHAEP62258 255 aaKnown RBP3.93□□□□□ -1.78
TOP2A-201ENST00000423485 BECN1Q14457 450 aa3.93□□□□□ -1.78
TOP2A-201ENST00000423485 PPP2R5AQ15172 486 aa3.93□□□□□ -1.78
TOP2A-201ENST00000423485 E4F1Q66K89 784 aaPredicted RBP3.93□□□□□ -1.78
TOP2A-201ENST00000423485 USP53Q70EK8 1073 aa3.93□□□□□ -1.78
TOP2A-201ENST00000423485 RPAINQ86UA6 219 aa3.93□□□□□ -1.78
TOP2A-201ENST00000423485 RAB42Q8N4Z0 105 aa3.93□□□□□ -1.78
TOP2A-201ENST00000423485 SRBD1Q8N5C6 995 aaKnown RBP3.93□□□□□ -1.78
TOP2A-201ENST00000423485 OTUD6BQ8N6M0 293 aa3.93□□□□□ -1.78
TOP2A-201ENST00000423485 ACRBPQ8NEB7 543 aa3.93□□□□□ -1.78
TOP2A-201ENST00000423485 NOX5Q96PH1 765 aa3.93□□□□□ -1.78
TOP2A-201ENST00000423485 DDX23Q9BUQ8 820 aaKnown RBP3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms