RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 DNAI1Q9UI46 699 aa10.7□□□□□ -0.7
CMSS1-201ENST00000421999 NUP98P52948 1817 aa10.7□□□□□ -0.7
CMSS1-201ENST00000421999 DYNC1LI2O43237 492 aaPredicted RBP10.69□□□□□ -0.7
CMSS1-201ENST00000421999 GBP2P32456 591 aaPredicted RBP10.69□□□□□ -0.7
CMSS1-201ENST00000421999 VWA3BQ502W6 1294 aa10.69□□□□□ -0.7
CMSS1-201ENST00000421999 GPRC5AQ8NFJ5 357 aa10.69□□□□□ -0.7
CMSS1-201ENST00000421999 LMBR1Q8WVP7 490 aa10.69□□□□□ -0.7
CMSS1-201ENST00000421999 FAM20AQ96MK3 541 aa10.69□□□□□ -0.7
CMSS1-201ENST00000421999 SPATA33Q96N06 139 aa10.69□□□□□ -0.7
CMSS1-201ENST00000421999 TMEM60Q9H2L4 133 aa10.69□□□□□ -0.7
CMSS1-201ENST00000421999 RIOX1Q9H6W3 641 aa10.69□□□□□ -0.7
CMSS1-201ENST00000421999 FBXO2Q9UK22 296 aaPredicted RBP10.69□□□□□ -0.7
CMSS1-201ENST00000421999 POTEB3A0JP26 581 aa10.69□□□□□ -0.7
CMSS1-201ENST00000421999 SFI1A8K8P3 1242 aa10.69□□□□□ -0.7
CMSS1-201ENST00000421999 POTECB2RU33 542 aa10.69□□□□□ -0.7
CMSS1-201ENST00000421999 SPOPO43791 374 aa10.69□□□□□ -0.7
CMSS1-201ENST00000421999 POTEBQ6S5H4 581 aa10.69□□□□□ -0.7
CMSS1-201ENST00000421999 JAKMIP2Q96AA8 810 aa10.69□□□□□ -0.7
CMSS1-201ENST00000421999 TBC1D22BQ9NU19 505 aa10.69□□□□□ -0.7
CMSS1-201ENST00000421999 MAN1B1Q9UKM7 699 aa10.69□□□□□ -0.7
CMSS1-201ENST00000421999 ZBBXA8MT70 800 aa10.69□□□□□ -0.7
CMSS1-201ENST00000421999 XPOTO43592 962 aaKnown RBP10.69□□□□□ -0.7
CMSS1-201ENST00000421999 ZNF75DP51815 510 aa10.69□□□□□ -0.7
CMSS1-201ENST00000421999 SWSAP1Q6NVH7 229 aa10.69□□□□□ -0.7
CMSS1-201ENST00000421999 C7orf31Q8N865 590 aa10.69□□□□□ -0.7
CMSS1-201ENST00000421999 BANK1Q8NDB2 785 aa10.69□□□□□ -0.7
CMSS1-201ENST00000421999 ANKS1AQ92625 1134 aa10.69□□□□□ -0.7
CMSS1-201ENST00000421999 XPO4Q9C0E2 1151 aaKnown RBP10.69□□□□□ -0.7
CMSS1-201ENST00000421999 PCIF1Q9H4Z3 704 aa10.69□□□□□ -0.7
CMSS1-201ENST00000421999 E9PMD0 336 aa10.68□□□□□ -0.7
CMSS1-201ENST00000421999 FOXN1O15353 648 aa10.68□□□□□ -0.7
CMSS1-201ENST00000421999 GNAT1P11488 350 aa10.68□□□□□ -0.7
CMSS1-201ENST00000421999 YY1P25490 414 aa10.68□□□□□ -0.7
CMSS1-201ENST00000421999 PEX3P56589 373 aa10.68□□□□□ -0.7
CMSS1-201ENST00000421999 TFAMQ00059 246 aaKnown RBP10.68□□□□□ -0.7
CMSS1-201ENST00000421999 KRT76Q01546 638 aa10.68□□□□□ -0.7
CMSS1-201ENST00000421999 GRIN1Q05586 938 aa10.68□□□□□ -0.7
CMSS1-201ENST00000421999 ASIC2Q16515 512 aa10.68□□□□□ -0.7
CMSS1-201ENST00000421999 ZBTB33Q86T24 672 aa10.68□□□□□ -0.7
CMSS1-201ENST00000421999 GMCL1P1Q8NEA9 526 aa10.68□□□□□ -0.7
CMSS1-201ENST00000421999 PARVGQ9HBI0 331 aa10.68□□□□□ -0.7
CMSS1-201ENST00000421999 C1orf112Q9NSG2 853 aa10.68□□□□□ -0.7
CMSS1-201ENST00000421999 PPP2R3BQ9Y5P8 575 aa10.68□□□□□ -0.7
CMSS1-201ENST00000421999 ABCA3Q99758 1704 aa10.68□□□□□ -0.7
CMSS1-201ENST00000421999 CLIC2O15247 247 aa10.68□□□□□ -0.7
CMSS1-201ENST00000421999 NR2F2P24468 414 aa10.68□□□□□ -0.7
CMSS1-201ENST00000421999 RPS6P62753 249 aaKnown RBP10.68□□□□□ -0.7
CMSS1-201ENST00000421999 KLHL30Q0D2K2 578 aa10.68□□□□□ -0.7
CMSS1-201ENST00000421999 CUL4BQ13620 913 aa10.68□□□□□ -0.7
CMSS1-201ENST00000421999 SLC9C1Q4G0N8 1177 aa10.68□□□□□ -0.7
CMSS1-201ENST00000421999 GIMAP8Q8ND71 665 aaPredicted RBP10.68□□□□□ -0.7
CMSS1-201ENST00000421999 C7orf43Q8WVR3 580 aa10.68□□□□□ -0.7
CMSS1-201ENST00000421999 PPP1R9BQ96SB3 815 aa10.68□□□□□ -0.7
CMSS1-201ENST00000421999 MED10Q9BTT4 135 aa10.68□□□□□ -0.7
CMSS1-201ENST00000421999 ZMYND15Q9H091 742 aa10.68□□□□□ -0.7
CMSS1-201ENST00000421999 MAGEF1Q9HAY2 307 aa10.68□□□□□ -0.7
CMSS1-201ENST00000421999 GINM1Q9NU53 330 aa10.68□□□□□ -0.7
CMSS1-201ENST00000421999 GABBR1Q9UBS5 961 aa10.68□□□□□ -0.7
CMSS1-201ENST00000421999 COL1A1P02452 1464 aaPredicted RBP10.68□□□□□ -0.7
CMSS1-201ENST00000421999 POTEFA5A3E0 1075 aa10.68□□□□□ -0.7
CMSS1-201ENST00000421999 POTEIP0CG38 1075 aa10.68□□□□□ -0.7
CMSS1-201ENST00000421999 ATF7P17544 494 aaPredicted RBP10.68□□□□□ -0.7
CMSS1-201ENST00000421999 MORC3Q14149 939 aa10.68□□□□□ -0.7
CMSS1-201ENST00000421999 POTEGQ6S5H5 508 aa10.68□□□□□ -0.7
CMSS1-201ENST00000421999 POTEEQ6S8J3 1075 aa10.68□□□□□ -0.7
CMSS1-201ENST00000421999 MOB2Q70IA6 237 aa10.68□□□□□ -0.7
CMSS1-201ENST00000421999 PRDM5Q9NQX1 630 aaPredicted RBP10.68□□□□□ -0.7
CMSS1-201ENST00000421999 TACC3Q9Y6A5 838 aa10.68□□□□□ -0.7
CMSS1-201ENST00000421999 JAK3P52333 1124 aa10.67□□□□□ -0.7
CMSS1-201ENST00000421999 GTF2A2P52657 109 aa10.67□□□□□ -0.7
CMSS1-201ENST00000421999 IFFO1Q0D2I5 559 aa10.67□□□□□ -0.7
CMSS1-201ENST00000421999 CCDC102AQ96A19 550 aa10.67□□□□□ -0.7
CMSS1-201ENST00000421999 SELENOOQ9BVL4 669 aa10.67□□□□□ -0.7
CMSS1-201ENST00000421999 WDR70Q9NW82 654 aa10.67□□□□□ -0.7
CMSS1-201ENST00000421999 ESYT2A0FGR8 921 aa10.67□□□□□ -0.7
CMSS1-201ENST00000421999 TLR3O15455 904 aaKnown RBP10.67□□□□□ -0.7
CMSS1-201ENST00000421999 GNA14O95837 355 aa10.67□□□□□ -0.7
CMSS1-201ENST00000421999 SNX16P57768 344 aa10.67□□□□□ -0.7
CMSS1-201ENST00000421999 CCDC122Q5T0U0 273 aa10.67□□□□□ -0.7
CMSS1-201ENST00000421999 RRAGAQ7L523 313 aa10.67□□□□□ -0.7
CMSS1-201ENST00000421999 THNSL1Q8IYQ7 743 aa10.67□□□□□ -0.7
CMSS1-201ENST00000421999 CDCA5Q96FF9 252 aa10.67□□□□□ -0.7
CMSS1-201ENST00000421999 BAG1Q99933 345 aaPredicted RBP10.67□□□□□ -0.7
CMSS1-201ENST00000421999 NUDT12Q9BQG2 462 aa10.67□□□□□ -0.7
CMSS1-201ENST00000421999 KIAA1683Q9H0B3 1180 aa10.67□□□□□ -0.7
CMSS1-201ENST00000421999 GBP3Q9H0R5 595 aa10.67□□□□□ -0.7
CMSS1-201ENST00000421999 HESX1Q9UBX0 185 aa10.67□□□□□ -0.7
CMSS1-201ENST00000421999 TOGARAM1Q9Y4F4 1720 aa10.67□□□□□ -0.7
CMSS1-201ENST00000421999 EGFRP00533 1210 aa10.67□□□□□ -0.7
CMSS1-201ENST00000421999 GABPAQ06546 454 aa10.67□□□□□ -0.7
CMSS1-201ENST00000421999 USP50Q70EL3 339 aaPredicted RBP10.67□□□□□ -0.7
CMSS1-201ENST00000421999 SH3BP5LQ7L8J4 393 aa10.67□□□□□ -0.7
CMSS1-201ENST00000421999 GSTA5Q7RTV2 222 aa10.67□□□□□ -0.7
CMSS1-201ENST00000421999 MICAL1Q8TDZ2 1067 aa10.67□□□□□ -0.7
CMSS1-201ENST00000421999 DYDC2Q96IM9 177 aa10.67□□□□□ -0.7
CMSS1-201ENST00000421999 FAM167AQ96KS9 214 aa10.67□□□□□ -0.7
CMSS1-201ENST00000421999 METTL14Q9HCE5 456 aaKnown RBP10.67□□□□□ -0.7
CMSS1-201ENST00000421999 A0A1W2PRG0 241 aa10.67□□□□□ -0.7
CMSS1-201ENST00000421999 DAPK3O43293 454 aa10.67□□□□□ -0.7
CMSS1-201ENST00000421999 GGPS1O95749 300 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms