RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 AFG1LQ8WV93 481 aa17.7■□□□□ 0.42
DDX55-203ENST00000421670 EMID1Q96A84 441 aaPredicted RBP17.7■□□□□ 0.42
DDX55-203ENST00000421670 FERMT2Q96AC1 680 aa17.7■□□□□ 0.42
DDX55-203ENST00000421670 XPNPEP3Q9NQH7 507 aa17.7■□□□□ 0.42
DDX55-203ENST00000421670 PAK6Q9NQU5 681 aaPredicted RBP17.7■□□□□ 0.42
DDX55-203ENST00000421670 MORC2Q9Y6X9 1032 aaPredicted RBP17.7■□□□□ 0.42
DDX55-203ENST00000421670 MKI67P46013 3256 aaKnown RBP17.69■□□□□ 0.42
DDX55-203ENST00000421670 ARID2Q68CP9 1835 aa17.69■□□□□ 0.42
DDX55-203ENST00000421670 MYADML2A6NDP7 307 aa17.69■□□□□ 0.42
DDX55-203ENST00000421670 NOP56O00567 594 aaKnown RBP17.69■□□□□ 0.42
DDX55-203ENST00000421670 CDC25AP30304 524 aa17.69■□□□□ 0.42
DDX55-203ENST00000421670 TPRNQ4KMQ1 711 aa17.69■□□□□ 0.42
DDX55-203ENST00000421670 SPECC1Q5M775 1068 aa17.69■□□□□ 0.42
DDX55-203ENST00000421670 ZNF746Q6NUN9 644 aaPredicted RBP17.69■□□□□ 0.42
DDX55-203ENST00000421670 GPR20Q99678 358 aa17.69■□□□□ 0.42
DDX55-203ENST00000421670 AP5M1Q9H0R1 490 aa17.69■□□□□ 0.42
DDX55-203ENST00000421670 RNF208Q9H0X6 261 aa17.69■□□□□ 0.42
DDX55-203ENST00000421670 CSRNP2Q9H175 543 aa17.69■□□□□ 0.42
DDX55-203ENST00000421670 PCDHA7Q9UN72 937 aa17.69■□□□□ 0.42
DDX55-203ENST00000421670 SAMM50Q9Y512 469 aa17.69■□□□□ 0.42
DDX55-203ENST00000421670 WDR64B1ANS9 1081 aa17.68■□□□□ 0.42
DDX55-203ENST00000421670 MYCNP04198 464 aaPredicted RBP17.68■□□□□ 0.42
DDX55-203ENST00000421670 MMP3P08254 477 aa17.68■□□□□ 0.42
DDX55-203ENST00000421670 C6orf222P0C671 652 aaPredicted RBP17.68■□□□□ 0.42
DDX55-203ENST00000421670 BEX3Q00994 111 aa17.68■□□□□ 0.42
DDX55-203ENST00000421670 LHX8Q68G74 356 aa17.68■□□□□ 0.42
DDX55-203ENST00000421670 MIER3Q7Z3K6 550 aa17.68■□□□□ 0.42
DDX55-203ENST00000421670 PPTC7Q8NI37 304 aa17.68■□□□□ 0.42
DDX55-203ENST00000421670 DEFB118Q96PH6 123 aa17.68■□□□□ 0.42
DDX55-203ENST00000421670 DISC1Q9NRI5 854 aa17.68■□□□□ 0.42
DDX55-203ENST00000421670 LRWD1Q9UFC0 647 aa17.68■□□□□ 0.42
DDX55-203ENST00000421670 KIAA0100Q14667 2235 aaKnown RBP17.67■□□□□ 0.42
DDX55-203ENST00000421670 LOXHD1Q8IVV2 1947 aa17.67■□□□□ 0.42
DDX55-203ENST00000421670 GSTTP1A0A1W2PQM5 241 aa17.67■□□□□ 0.42
DDX55-203ENST00000421670 CTAGE5O15320 804 aa17.67■□□□□ 0.42
DDX55-203ENST00000421670 MSCO60682 206 aa17.67■□□□□ 0.42
DDX55-203ENST00000421670 ADAMTS4O75173 837 aa17.67■□□□□ 0.42
DDX55-203ENST00000421670 TCF7P36402 384 aaPredicted RBP17.67■□□□□ 0.42
DDX55-203ENST00000421670 GJA9P57773 515 aa17.67■□□□□ 0.42
DDX55-203ENST00000421670 AXDND1Q5T1B0 1012 aaPredicted RBP17.67■□□□□ 0.42
DDX55-203ENST00000421670 CLEC17AQ6ZS10 378 aa17.67■□□□□ 0.42
DDX55-203ENST00000421670 SMAP1Q8IYB5 467 aaPredicted RBP17.67■□□□□ 0.42
DDX55-203ENST00000421670 GBP4Q96PP9 640 aa17.67■□□□□ 0.42
DDX55-203ENST00000421670 RAB34Q9BZG1 259 aa17.67■□□□□ 0.42
DDX55-203ENST00000421670 UPF3AQ9H1J1 476 aaKnown RBP17.67■□□□□ 0.42
DDX55-203ENST00000421670 Q9Y3F1 56 aa17.67■□□□□ 0.42
DDX55-203ENST00000421670 CUTAO60888 179 aa17.66■□□□□ 0.42
DDX55-203ENST00000421670 SFNP31947 248 aa17.66■□□□□ 0.42
DDX55-203ENST00000421670 LONP1P36776 959 aaKnown RBP17.66■□□□□ 0.42
DDX55-203ENST00000421670 JAK3P52333 1124 aa17.66■□□□□ 0.42
DDX55-203ENST00000421670 CYP4A11Q02928 519 aa17.66■□□□□ 0.42
DDX55-203ENST00000421670 FSCN1Q16658 493 aaKnown RBP17.66■□□□□ 0.42
DDX55-203ENST00000421670 ABHD15Q6UXT9 468 aa17.66■□□□□ 0.42
DDX55-203ENST00000421670 USP49Q70CQ1 688 aa17.66■□□□□ 0.42
DDX55-203ENST00000421670 TRIM50Q86XT4 487 aa17.66■□□□□ 0.42
DDX55-203ENST00000421670 CCDC60Q8IWA6 550 aaPredicted RBP17.66■□□□□ 0.42
DDX55-203ENST00000421670 A6NJR5 290 aa17.66■□□□□ 0.42
DDX55-203ENST00000421670 SUPT20HL2P0C7V6 817 aa17.66■□□□□ 0.42
DDX55-203ENST00000421670 ZNF286BP0CG31 522 aa17.66■□□□□ 0.42
DDX55-203ENST00000421670 CPT1AP50416 773 aa17.66■□□□□ 0.42
DDX55-203ENST00000421670 PDIA5Q14554 519 aa17.66■□□□□ 0.42
DDX55-203ENST00000421670 BANK1Q8NDB2 785 aa17.66■□□□□ 0.42
DDX55-203ENST00000421670 SEPT1Q8WYJ6 367 aa17.66■□□□□ 0.42
DDX55-203ENST00000421670 EPSTI1Q96J88 318 aa17.66■□□□□ 0.42
DDX55-203ENST00000421670 EIF2AK1Q9BQI3 630 aaKnown RBP17.66■□□□□ 0.42
DDX55-203ENST00000421670 SPC25Q9HBM1 224 aa17.66■□□□□ 0.42
DDX55-203ENST00000421670 RGL1Q9NZL6 768 aa17.66■□□□□ 0.42
DDX55-203ENST00000421670 PCDHA10Q9Y5I2 948 aa17.66■□□□□ 0.42
DDX55-203ENST00000421670 BACH1O14867 736 aa17.65■□□□□ 0.42
DDX55-203ENST00000421670 ATG7O95352 703 aa17.65■□□□□ 0.42
DDX55-203ENST00000421670 PSAPP07602 524 aa17.65■□□□□ 0.42
DDX55-203ENST00000421670 UGCGQ16739 394 aa17.65■□□□□ 0.42
DDX55-203ENST00000421670 UTP14CQ5TAP6 766 aaKnown RBP17.65■□□□□ 0.42
DDX55-203ENST00000421670 MIS18BP1Q6P0N0 1132 aa17.65■□□□□ 0.42
DDX55-203ENST00000421670 SHC4Q6S5L8 630 aa17.65■□□□□ 0.42
DDX55-203ENST00000421670 SNX29Q8TEQ0 813 aa17.65■□□□□ 0.42
DDX55-203ENST00000421670 SYMPKQ92797 1274 aaKnown RBP17.65■□□□□ 0.42
DDX55-203ENST00000421670 DYDC2Q96IM9 177 aa17.65■□□□□ 0.42
DDX55-203ENST00000421670 AK8Q96MA6 479 aa17.65■□□□□ 0.42
DDX55-203ENST00000421670 MMTAG2Q9BU76 263 aaKnown RBP17.65■□□□□ 0.42
DDX55-203ENST00000421670 SCN10AQ9Y5Y9 1956 aa17.64■□□□□ 0.41
DDX55-203ENST00000421670 KAT6AQ92794 2004 aa17.64■□□□□ 0.41
DDX55-203ENST00000421670 MED24O75448 989 aa17.64■□□□□ 0.41
DDX55-203ENST00000421670 LGALS2P05162 132 aa17.64■□□□□ 0.41
DDX55-203ENST00000421670 HOXD8P13378 290 aaPredicted RBP17.64■□□□□ 0.41
DDX55-203ENST00000421670 EPHA7Q15375 998 aa17.64■□□□□ 0.41
DDX55-203ENST00000421670 ZRSR1Q15695 479 aaKnown RBP17.64■□□□□ 0.41
DDX55-203ENST00000421670 DGKDQ16760 1214 aa17.64■□□□□ 0.41
DDX55-203ENST00000421670 CSPP1Q1MSJ5 1256 aa17.64■□□□□ 0.41
DDX55-203ENST00000421670 GNASQ5JWF2 1037 aa17.64■□□□□ 0.41
DDX55-203ENST00000421670 SWSAP1Q6NVH7 229 aa17.64■□□□□ 0.41
DDX55-203ENST00000421670 TMEM87AQ8NBN3 555 aa17.64■□□□□ 0.41
DDX55-203ENST00000421670 RDM1Q8NG50 284 aa17.64■□□□□ 0.41
DDX55-203ENST00000421670 ERMNQ8TAM6 284 aa17.64■□□□□ 0.41
DDX55-203ENST00000421670 PCYT2Q99447 389 aa17.64■□□□□ 0.41
DDX55-203ENST00000421670 GABBR1Q9UBS5 961 aa17.64■□□□□ 0.41
DDX55-203ENST00000421670 EMSYQ7Z589 1322 aa17.64■□□□□ 0.41
DDX55-203ENST00000421670 IGSF9BQ9UPX0 1349 aa17.64■□□□□ 0.41
DDX55-203ENST00000421670 IGKV6D-21A0A0A0MT36 114 aa17.63■□□□□ 0.41
DDX55-203ENST00000421670 POTEB3A0JP26 581 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms