RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 LSM14BQ9BX40 385 aaKnown RBP12.11□□□□□ -0.47
DDX56-203ENST00000421223 ZNF341Q9BYN7 854 aa12.11□□□□□ -0.47
DDX56-203ENST00000421223 HERC5Q9UII4 1024 aaKnown RBP12.11□□□□□ -0.47
DDX56-203ENST00000421223 GJA3Q9Y6H8 435 aa12.11□□□□□ -0.47
DDX56-203ENST00000421223 MYH7BA7E2Y1 1941 aa12.1□□□□□ -0.47
DDX56-203ENST00000421223 KRT86O43790 486 aa12.1□□□□□ -0.47
DDX56-203ENST00000421223 TBCAO75347 108 aaKnown RBP12.1□□□□□ -0.47
DDX56-203ENST00000421223 FOSP01100 380 aaPredicted RBP12.1□□□□□ -0.47
DDX56-203ENST00000421223 NR2F2P24468 414 aa12.1□□□□□ -0.47
DDX56-203ENST00000421223 CXCL9Q07325 125 aa12.1□□□□□ -0.47
DDX56-203ENST00000421223 KIF5AQ12840 1032 aa12.1□□□□□ -0.47
DDX56-203ENST00000421223 PSMD2Q13200 908 aa12.1□□□□□ -0.47
DDX56-203ENST00000421223 TBC1D10BQ4KMP7 808 aaPredicted RBP12.1□□□□□ -0.47
DDX56-203ENST00000421223 PRAMEF18Q5VWM3 479 aa12.1□□□□□ -0.47
DDX56-203ENST00000421223 LRRC55Q6ZSA7 311 aa12.1□□□□□ -0.47
DDX56-203ENST00000421223 SRGAP1Q7Z6B7 1085 aa12.1□□□□□ -0.47
DDX56-203ENST00000421223 ETNPPLQ8TBG4 499 aa12.1□□□□□ -0.47
DDX56-203ENST00000421223 EIF2AK1Q9BQI3 630 aaKnown RBP12.1□□□□□ -0.47
DDX56-203ENST00000421223 MYO6Q9UM54 1294 aa12.1□□□□□ -0.47
DDX56-203ENST00000421223 LTBP1Q14766 1721 aa12.1□□□□□ -0.47
DDX56-203ENST00000421223 ATP1A1P05023 1023 aaKnown RBP12.1□□□□□ -0.47
DDX56-203ENST00000421223 MYBP10242 640 aa12.1□□□□□ -0.47
DDX56-203ENST00000421223 H2AFXP16104 143 aaPredicted RBP12.1□□□□□ -0.47
DDX56-203ENST00000421223 KCNA1Q09470 495 aa12.1□□□□□ -0.47
DDX56-203ENST00000421223 LENG9Q96B70 501 aa12.1□□□□□ -0.47
DDX56-203ENST00000421223 DYDC2Q96IM9 177 aa12.1□□□□□ -0.47
DDX56-203ENST00000421223 FZD1Q9UP38 647 aa12.1□□□□□ -0.47
DDX56-203ENST00000421223 SAMM50Q9Y512 469 aa12.1□□□□□ -0.47
DDX56-203ENST00000421223 PCDHB13Q9Y5F0 798 aa12.1□□□□□ -0.47
DDX56-203ENST00000421223 CTAGE15A4D2H0 777 aa12.09□□□□□ -0.47
DDX56-203ENST00000421223 GAS7O60861 476 aa12.09□□□□□ -0.47
DDX56-203ENST00000421223 EGFRP00533 1210 aa12.09□□□□□ -0.47
DDX56-203ENST00000421223 CTAGE8P0CG41 777 aa12.09□□□□□ -0.47
DDX56-203ENST00000421223 SPATA31C1P0DKV0 1188 aa12.09□□□□□ -0.47
DDX56-203ENST00000421223 SREBF1P36956 1147 aa12.09□□□□□ -0.47
DDX56-203ENST00000421223 RAPGEF1Q13905 1077 aa12.09□□□□□ -0.47
DDX56-203ENST00000421223 CTAGE6Q86UF2 777 aa12.09□□□□□ -0.47
DDX56-203ENST00000421223 CTAGE4Q8IX94 777 aa12.09□□□□□ -0.47
DDX56-203ENST00000421223 KRT222Q8N1A0 295 aa12.09□□□□□ -0.47
DDX56-203ENST00000421223 MYCT1Q8N699 235 aa12.09□□□□□ -0.47
DDX56-203ENST00000421223 CHURC1Q8WUH1 139 aa12.09□□□□□ -0.47
DDX56-203ENST00000421223 JDP2Q8WYK2 163 aa12.09□□□□□ -0.47
DDX56-203ENST00000421223 ERGIC2Q96RQ1 377 aa12.09□□□□□ -0.47
DDX56-203ENST00000421223 RUSC1Q9BVN2 902 aa12.09□□□□□ -0.47
DDX56-203ENST00000421223 IFIH1Q9BYX4 1025 aaKnown RBP12.09□□□□□ -0.47
DDX56-203ENST00000421223 HAUS4Q9H6D7 363 aa12.09□□□□□ -0.47
DDX56-203ENST00000421223 MLXIPQ9HAP2 919 aa12.09□□□□□ -0.47
DDX56-203ENST00000421223 TMX2Q9Y320 296 aa12.09□□□□□ -0.47
DDX56-203ENST00000421223 RABGAP1Q9Y3P9 1069 aa12.09□□□□□ -0.47
DDX56-203ENST00000421223 LRRC37AA6NMS7 1700 aa12.09□□□□□ -0.47
DDX56-203ENST00000421223 CETN3O15182 167 aa12.09□□□□□ -0.47
DDX56-203ENST00000421223 ALAS1P13196 640 aa12.09□□□□□ -0.47
DDX56-203ENST00000421223 MATR3P43243 847 aaKnown RBP eCLIP12.09□□□□□ -0.47
DDX56-203ENST00000421223 BMS1Q14692 1282 aaKnown RBP12.09□□□□□ -0.47
DDX56-203ENST00000421223 LDHDQ86WU2 507 aa12.09□□□□□ -0.47
DDX56-203ENST00000421223 TTYH3Q9C0H2 523 aa12.09□□□□□ -0.47
DDX56-203ENST00000421223 ARHGAP20Q9P2F6 1191 aa12.09□□□□□ -0.47
DDX56-203ENST00000421223 ZNRF3Q9ULT6 936 aa12.09□□□□□ -0.47
DDX56-203ENST00000421223 CTDP1Q9Y5B0 961 aaPredicted RBP12.09□□□□□ -0.47
DDX56-203ENST00000421223 ABCB11O95342 1321 aa12.09□□□□□ -0.47
DDX56-203ENST00000421223 WNT10BO00744 389 aa12.08□□□□□ -0.47
DDX56-203ENST00000421223 ZNF185O15231 689 aa12.08□□□□□ -0.47
DDX56-203ENST00000421223 BUB1O43683 1085 aa12.08□□□□□ -0.47
DDX56-203ENST00000421223 VIL1P09327 827 aaKnown RBP12.08□□□□□ -0.47
DDX56-203ENST00000421223 SLC12A3P55017 1021 aa12.08□□□□□ -0.47
DDX56-203ENST00000421223 MRPS25P82663 173 aaKnown RBP12.08□□□□□ -0.47
DDX56-203ENST00000421223 GFPT1Q06210 699 aaPredicted RBP12.08□□□□□ -0.47
DDX56-203ENST00000421223 GIT2Q14161 759 aa12.08□□□□□ -0.47
DDX56-203ENST00000421223 RASA3Q14644 834 aa12.08□□□□□ -0.47
DDX56-203ENST00000421223 GPR161Q8N6U8 529 aaKnown RBP12.08□□□□□ -0.47
DDX56-203ENST00000421223 CEP112Q8N8E3 955 aa12.08□□□□□ -0.47
DDX56-203ENST00000421223 RETREG2Q8NC44 543 aa12.08□□□□□ -0.47
DDX56-203ENST00000421223 WDR18Q9BV38 432 aa12.08□□□□□ -0.47
DDX56-203ENST00000421223 CCPG1Q9ULG6 757 aa12.08□□□□□ -0.47
DDX56-203ENST00000421223 FAM13AO94988 1023 aa12.08□□□□□ -0.48
DDX56-203ENST00000421223 ARP10275 920 aa12.08□□□□□ -0.48
DDX56-203ENST00000421223 ACTN1P12814 892 aa12.08□□□□□ -0.48
DDX56-203ENST00000421223 RPA1P27694 616 aa12.08□□□□□ -0.48
DDX56-203ENST00000421223 INPP5BP32019 993 aa12.08□□□□□ -0.48
DDX56-203ENST00000421223 CXCR5P32302 372 aa12.08□□□□□ -0.48
DDX56-203ENST00000421223 KIF11P52732 1056 aa12.08□□□□□ -0.48
DDX56-203ENST00000421223 SPIRE1Q08AE8 756 aa12.08□□□□□ -0.48
DDX56-203ENST00000421223 RDH13Q8NBN7 331 aa12.08□□□□□ -0.48
DDX56-203ENST00000421223 NOA1Q8NC60 698 aaKnown RBP12.08□□□□□ -0.48
DDX56-203ENST00000421223 BANK1Q8NDB2 785 aa12.08□□□□□ -0.48
DDX56-203ENST00000421223 ARFGAP3Q9NP61 516 aa12.08□□□□□ -0.48
DDX56-203ENST00000421223 SIK3Q9Y2K2 1263 aa12.08□□□□□ -0.48
DDX56-203ENST00000421223 CYP3A7-CYP3A51PA0A087WV96 503 aa12.08□□□□□ -0.48
DDX56-203ENST00000421223 ZNF263O14978 683 aa12.08□□□□□ -0.48
DDX56-203ENST00000421223 ZMYND10O75800 440 aa12.08□□□□□ -0.48
DDX56-203ENST00000421223 MOCS3O95396 460 aa12.08□□□□□ -0.48
DDX56-203ENST00000421223 PNMA6AP0CW24 399 aaPredicted RBP12.08□□□□□ -0.48
DDX56-203ENST00000421223 CYP3A7P24462 503 aa12.08□□□□□ -0.48
DDX56-203ENST00000421223 NMT1P30419 496 aaKnown RBP12.08□□□□□ -0.48
DDX56-203ENST00000421223 MAGEA1P43355 309 aa12.08□□□□□ -0.48
DDX56-203ENST00000421223 RASSF7Q02833 373 aa12.08□□□□□ -0.48
DDX56-203ENST00000421223 SEMA3FQ13275 785 aa12.08□□□□□ -0.48
DDX56-203ENST00000421223 PTPROQ16827 1216 aa12.08□□□□□ -0.48
DDX56-203ENST00000421223 SPDYE2Q495Y8 402 aa12.08□□□□□ -0.48
DDX56-203ENST00000421223 ZC2HC1CQ53FD0 456 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms