RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 CHMLP26374 656 aa19.44■□□□□ 0.7
UPF3AP3-201ENST00000420996 PDE4AP27815 886 aa19.44■□□□□ 0.7
UPF3AP3-201ENST00000420996 ARHGAP4P98171 946 aa19.44■□□□□ 0.7
UPF3AP3-201ENST00000420996 GIMAP8Q8ND71 665 aaPredicted RBP19.44■□□□□ 0.7
UPF3AP3-201ENST00000420996 SPZ1Q9BXG8 430 aa19.44■□□□□ 0.7
UPF3AP3-201ENST00000420996 TELO2Q9Y4R8 837 aa19.44■□□□□ 0.7
UPF3AP3-201ENST00000420996 TAF6LQ9Y6J9 622 aa19.44■□□□□ 0.7
UPF3AP3-201ENST00000420996 NRCAMQ92823 1304 aa19.44■□□□□ 0.7
UPF3AP3-201ENST00000420996 FAM86C2PA6NEL3 165 aa19.43■□□□□ 0.7
UPF3AP3-201ENST00000420996 SMARCA1P28370 1054 aa19.43■□□□□ 0.7
UPF3AP3-201ENST00000420996 USP17L6PQ6QN14 398 aa19.43■□□□□ 0.7
UPF3AP3-201ENST00000420996 RPAINQ86UA6 219 aa19.43■□□□□ 0.7
UPF3AP3-201ENST00000420996 NLRX1Q86UT6 975 aa19.43■□□□□ 0.7
UPF3AP3-201ENST00000420996 PABPC5Q96DU9 382 aaKnown RBP19.43■□□□□ 0.7
UPF3AP3-201ENST00000420996 RRP36Q96EU6 259 aaKnown RBP19.43■□□□□ 0.7
UPF3AP3-201ENST00000420996 IL17RAQ96F46 866 aa19.43■□□□□ 0.7
UPF3AP3-201ENST00000420996 MEIS2O14770 477 aa19.42■□□□□ 0.7
UPF3AP3-201ENST00000420996 CHRNA1P02708 482 aa19.42■□□□□ 0.7
UPF3AP3-201ENST00000420996 SSTR3P32745 418 aaPredicted RBP19.42■□□□□ 0.7
UPF3AP3-201ENST00000420996 ANTXR2P58335 489 aa19.42■□□□□ 0.7
UPF3AP3-201ENST00000420996 SP4Q02446 784 aa19.42■□□□□ 0.7
UPF3AP3-201ENST00000420996 COL19A1Q14993 1142 aa19.42■□□□□ 0.7
UPF3AP3-201ENST00000420996 TCEAL5Q5H9L2 206 aa19.42■□□□□ 0.7
UPF3AP3-201ENST00000420996 NSUN3Q9H649 340 aaKnown RBP19.42■□□□□ 0.7
UPF3AP3-201ENST00000420996 EHMT1Q9H9B1 1298 aa19.42■□□□□ 0.7
UPF3AP3-201ENST00000420996 PRR33A8MZF0 331 aa19.41■□□□□ 0.7
UPF3AP3-201ENST00000420996 H3BQ06 376 aaPredicted RBP19.41■□□□□ 0.7
UPF3AP3-201ENST00000420996 KIF5BP33176 963 aa19.41■□□□□ 0.7
UPF3AP3-201ENST00000420996 TAF2Q6P1X5 1199 aa19.41■□□□□ 0.7
UPF3AP3-201ENST00000420996 MB21D2Q8IYB1 491 aaPredicted RBP19.41■□□□□ 0.7
UPF3AP3-201ENST00000420996 ZNF654Q8IZM8 581 aa19.41■□□□□ 0.7
UPF3AP3-201ENST00000420996 FIBCD1Q8N539 461 aa19.41■□□□□ 0.7
UPF3AP3-201ENST00000420996 CTCFLQ8NI51 663 aaPredicted RBP19.41■□□□□ 0.7
UPF3AP3-201ENST00000420996 GPRASP2Q96D09 838 aa19.41■□□□□ 0.7
UPF3AP3-201ENST00000420996 LZTS2Q9BRK4 669 aa19.41■□□□□ 0.7
UPF3AP3-201ENST00000420996 FAM50BQ9Y247 325 aa19.41■□□□□ 0.7
UPF3AP3-201ENST00000420996 C5orf67F2Z3F1 127 aa19.4■□□□□ 0.7
UPF3AP3-201ENST00000420996 SGSM2O43147 1006 aa19.4■□□□□ 0.7
UPF3AP3-201ENST00000420996 DDAH1O94760 285 aa19.4■□□□□ 0.7
UPF3AP3-201ENST00000420996 RB1P06400 928 aa19.4■□□□□ 0.7
UPF3AP3-201ENST00000420996 ALADP13716 330 aa19.4■□□□□ 0.7
UPF3AP3-201ENST00000420996 TCF7P36402 384 aaPredicted RBP19.4■□□□□ 0.7
UPF3AP3-201ENST00000420996 RUFY4Q6ZNE9 571 aa19.4■□□□□ 0.7
UPF3AP3-201ENST00000420996 RSPH3Q86UC2 560 aa19.4■□□□□ 0.7
UPF3AP3-201ENST00000420996 CDHR1Q96JP9 859 aa19.4■□□□□ 0.7
UPF3AP3-201ENST00000420996 LY9Q9HBG7 655 aa19.4■□□□□ 0.7
UPF3AP3-201ENST00000420996 SEC63Q9UGP8 760 aaKnown RBP19.4■□□□□ 0.7
UPF3AP3-201ENST00000420996 SUPT16HQ9Y5B9 1047 aaKnown RBP19.4■□□□□ 0.7
UPF3AP3-201ENST00000420996 ATG2AQ2TAZ0 1938 aa19.39■□□□□ 0.7
UPF3AP3-201ENST00000420996 NCK2O43639 380 aa19.39■□□□□ 0.69
UPF3AP3-201ENST00000420996 ATP9AO75110 1047 aa19.39■□□□□ 0.69
UPF3AP3-201ENST00000420996 GHRP10912 638 aa19.39■□□□□ 0.69
UPF3AP3-201ENST00000420996 KCNA2P16389 499 aa19.39■□□□□ 0.69
UPF3AP3-201ENST00000420996 CTNNB1P35222 781 aa19.39■□□□□ 0.69
UPF3AP3-201ENST00000420996 BMPR1AP36894 532 aa19.39■□□□□ 0.69
UPF3AP3-201ENST00000420996 GNAQP50148 359 aa19.39■□□□□ 0.69
UPF3AP3-201ENST00000420996 SEPT1Q8WYJ6 367 aa19.39■□□□□ 0.69
UPF3AP3-201ENST00000420996 MAP4K1Q92918 833 aa19.39■□□□□ 0.69
UPF3AP3-201ENST00000420996 MTA3Q9BTC8 594 aa19.39■□□□□ 0.69
UPF3AP3-201ENST00000420996 C11orf84Q9BUA3 381 aaPredicted RBP19.39■□□□□ 0.69
UPF3AP3-201ENST00000420996 MYL10Q9BUA6 226 aa19.39■□□□□ 0.69
UPF3AP3-201ENST00000420996 LMAN2LQ9H0V9 348 aa19.39■□□□□ 0.69
UPF3AP3-201ENST00000420996 RWDD3Q9Y3V2 267 aa19.39■□□□□ 0.69
UPF3AP3-201ENST00000420996 GSTTP1A0A1W2PQM5 241 aa19.38■□□□□ 0.69
UPF3AP3-201ENST00000420996 ENPP3O14638 875 aa19.38■□□□□ 0.69
UPF3AP3-201ENST00000420996 LINC00271P0C7V0 271 aa19.38■□□□□ 0.69
UPF3AP3-201ENST00000420996 TTC3P53804 2025 aa19.38■□□□□ 0.69
UPF3AP3-201ENST00000420996 MGAT3Q09327 533 aa19.38■□□□□ 0.69
UPF3AP3-201ENST00000420996 PPFIA1Q13136 1202 aa19.38■□□□□ 0.69
UPF3AP3-201ENST00000420996 LPIN1Q14693 890 aa19.38■□□□□ 0.69
UPF3AP3-201ENST00000420996 EP400NLQ6ZTU2 488 aa19.38■□□□□ 0.69
UPF3AP3-201ENST00000420996 TMTC2Q8N394 836 aa19.38■□□□□ 0.69
UPF3AP3-201ENST00000420996 PSTPIP2Q9H939 334 aa19.38■□□□□ 0.69
UPF3AP3-201ENST00000420996 CLDND1Q9NY35 253 aa19.38■□□□□ 0.69
UPF3AP3-201ENST00000420996 ERAP1Q9NZ08 941 aa19.38■□□□□ 0.69
UPF3AP3-201ENST00000420996 PRKAG3Q9UGI9 489 aa19.38■□□□□ 0.69
UPF3AP3-201ENST00000420996 MYO7AQ13402 2215 aa19.37■□□□□ 0.69
UPF3AP3-201ENST00000420996 ADGRA3Q8IWK6 1321 aa19.37■□□□□ 0.69
UPF3AP3-201ENST00000420996 MBLAC1A4D2B0 266 aaPredicted RBP19.37■□□□□ 0.69
UPF3AP3-201ENST00000420996 ITGB5P18084 799 aa19.37■□□□□ 0.69
UPF3AP3-201ENST00000420996 GRIK4Q16099 956 aa19.37■□□□□ 0.69
UPF3AP3-201ENST00000420996 CASC1Q6TDU7 716 aa19.37■□□□□ 0.69
UPF3AP3-201ENST00000420996 SRBD1Q8N5C6 995 aaKnown RBP19.37■□□□□ 0.69
UPF3AP3-201ENST00000420996 CLP1Q92989 425 aaKnown RBP19.37■□□□□ 0.69
UPF3AP3-201ENST00000420996 SMARCAD1Q9H4L7 1026 aa19.37■□□□□ 0.69
UPF3AP3-201ENST00000420996 RC3H2Q9HBD1 1191 aaKnown RBP19.37■□□□□ 0.69
UPF3AP3-201ENST00000420996 TUBE1Q9UJT0 475 aa19.37■□□□□ 0.69
UPF3AP3-201ENST00000420996 RBM8AQ9Y5S9 174 aaKnown RBP19.37■□□□□ 0.69
UPF3AP3-201ENST00000420996 UBIAD1Q9Y5Z9 338 aa19.37■□□□□ 0.69
UPF3AP3-201ENST00000420996 PLEKHA8P1O95397 391 aa19.36■□□□□ 0.69
UPF3AP3-201ENST00000420996 LTBRP36941 435 aa19.36■□□□□ 0.69
UPF3AP3-201ENST00000420996 ZP2Q05996 745 aa19.36■□□□□ 0.69
UPF3AP3-201ENST00000420996 CTC1Q2NKJ3 1217 aa19.36■□□□□ 0.69
UPF3AP3-201ENST00000420996 FBXO47Q5MNV8 452 aa19.36■□□□□ 0.69
UPF3AP3-201ENST00000420996 MARCH8Q5T0T0 291 aa19.36■□□□□ 0.69
UPF3AP3-201ENST00000420996 DNAJB3Q8WWF6 145 aa19.36■□□□□ 0.69
UPF3AP3-201ENST00000420996 GLG1Q92896 1179 aa19.36■□□□□ 0.69
UPF3AP3-201ENST00000420996 ZNF689Q96CS4 500 aaPredicted RBP19.36■□□□□ 0.69
UPF3AP3-201ENST00000420996 POTEB3A0JP26 581 aa19.35■□□□□ 0.69
UPF3AP3-201ENST00000420996 C19orf67A6NJJ6 358 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms