RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 WNT8BQ93098 351 aa24.4■■□□□ 1.5
PTPN4-202ENST00000420482 SETD4Q9NVD3 440 aa24.4■■□□□ 1.5
PTPN4-202ENST00000420482 BARHL2Q9NY43 387 aa24.4■■□□□ 1.5
PTPN4-202ENST00000420482 ERAP1Q9NZ08 941 aa24.4■■□□□ 1.5
PTPN4-202ENST00000420482 ATP9AO75110 1047 aa24.39■■□□□ 1.49
PTPN4-202ENST00000420482 PSMA5P28066 241 aa24.39■■□□□ 1.49
PTPN4-202ENST00000420482 ARHGAP4P98171 946 aa24.39■■□□□ 1.49
PTPN4-202ENST00000420482 AP3B2Q13367 1082 aa24.39■■□□□ 1.49
PTPN4-202ENST00000420482 HIC1Q14526 733 aa24.39■■□□□ 1.49
PTPN4-202ENST00000420482 CCDC85BQ15834 202 aaPredicted RBP24.39■■□□□ 1.49
PTPN4-202ENST00000420482 TRAF7Q6Q0C0 670 aa24.39■■□□□ 1.49
PTPN4-202ENST00000420482 TRIM50Q86XT4 487 aa24.39■■□□□ 1.49
PTPN4-202ENST00000420482 CCDC12Q8WUD4 166 aaPredicted RBP24.39■■□□□ 1.49
PTPN4-202ENST00000420482 GLG1Q92896 1179 aa24.39■■□□□ 1.49
PTPN4-202ENST00000420482 JAKMIP1Q96N16 626 aaKnown RBP24.39■■□□□ 1.49
PTPN4-202ENST00000420482 RAD9AQ99638 391 aa24.39■■□□□ 1.49
PTPN4-202ENST00000420482 SMARCAD1Q9H4L7 1026 aa24.39■■□□□ 1.49
PTPN4-202ENST00000420482 SMCO2A6NFE2 343 aa24.38■■□□□ 1.49
PTPN4-202ENST00000420482 AMHP03971 560 aa24.38■■□□□ 1.49
PTPN4-202ENST00000420482 NEFLP07196 543 aa24.38■■□□□ 1.49
PTPN4-202ENST00000420482 HSPA4P34932 840 aa24.38■■□□□ 1.49
PTPN4-202ENST00000420482 TAP1Q03518 808 aa24.38■■□□□ 1.49
PTPN4-202ENST00000420482 MCTP2Q6DN12 878 aa24.38■■□□□ 1.49
PTPN4-202ENST00000420482 Q6ZUG5 572 aa24.38■■□□□ 1.49
PTPN4-202ENST00000420482 RSPH3Q86UC2 560 aa24.38■■□□□ 1.49
PTPN4-202ENST00000420482 SEPT8Q92599 483 aa24.38■■□□□ 1.49
PTPN4-202ENST00000420482 MXRA8Q9BRK3 442 aa24.38■■□□□ 1.49
PTPN4-202ENST00000420482 SDF4Q9BRK5 362 aa24.38■■□□□ 1.49
PTPN4-202ENST00000420482 JPH1Q9HDC5 661 aaPredicted RBP24.38■■□□□ 1.49
PTPN4-202ENST00000420482 PKD2L1Q9P0L9 805 aa24.38■■□□□ 1.49
PTPN4-202ENST00000420482 DOCK5Q9H7D0 1870 aa24.38■■□□□ 1.49
PTPN4-202ENST00000420482 STXBP3O00186 592 aa24.37■■□□□ 1.49
PTPN4-202ENST00000420482 TNFRSF10AO00220 468 aa24.37■■□□□ 1.49
PTPN4-202ENST00000420482 GJB5O95377 273 aa24.37■■□□□ 1.49
PTPN4-202ENST00000420482 DEFB103AP81534 67 aa24.37■■□□□ 1.49
PTPN4-202ENST00000420482 FUT2Q10981 343 aa24.37■■□□□ 1.49
PTPN4-202ENST00000420482 MBTPS1Q14703 1052 aa24.37■■□□□ 1.49
PTPN4-202ENST00000420482 TAF2Q6P1X5 1199 aa24.37■■□□□ 1.49
PTPN4-202ENST00000420482 LMBR1Q8WVP7 490 aa24.37■■□□□ 1.49
PTPN4-202ENST00000420482 ARNTL2Q8WYA1 636 aa24.37■■□□□ 1.49
PTPN4-202ENST00000420482 KCNB2Q92953 911 aa24.37■■□□□ 1.49
PTPN4-202ENST00000420482 ANO3Q9BYT9 981 aa24.37■■□□□ 1.49
PTPN4-202ENST00000420482 AZI2Q9H6S1 392 aa24.37■■□□□ 1.49
PTPN4-202ENST00000420482 REV3LO60673 3130 aa24.37■■□□□ 1.49
PTPN4-202ENST00000420482 RPLP2P05387 115 aaKnown RBP24.36■■□□□ 1.49
PTPN4-202ENST00000420482 AKAP17AQ02040 695 aaKnown RBP24.36■■□□□ 1.49
PTPN4-202ENST00000420482 PPFIA1Q13136 1202 aa24.36■■□□□ 1.49
PTPN4-202ENST00000420482 PLEKHG4Q58EX7 1191 aa24.36■■□□□ 1.49
PTPN4-202ENST00000420482 MICALL1Q8N3F8 863 aa24.36■■□□□ 1.49
PTPN4-202ENST00000420482 IL27Q8NEV9 243 aa24.36■■□□□ 1.49
PTPN4-202ENST00000420482 DBF4BQ8NFT6 615 aa24.36■■□□□ 1.49
PTPN4-202ENST00000420482 APBB2Q92870 758 aa24.36■■□□□ 1.49
PTPN4-202ENST00000420482 BRF1Q92994 677 aa24.36■■□□□ 1.49
PTPN4-202ENST00000420482 ASB2Q96Q27 587 aa24.36■■□□□ 1.49
PTPN4-202ENST00000420482 CERS4Q9HA82 394 aa24.36■■□□□ 1.49
PTPN4-202ENST00000420482 KCNH7Q9NS40 1196 aa24.36■■□□□ 1.49
PTPN4-202ENST00000420482 SLC9A2Q9UBY0 812 aa24.36■■□□□ 1.49
PTPN4-202ENST00000420482 PRRC2BQ5JSZ5 2229 aaKnown RBP24.36■■□□□ 1.49
PTPN4-202ENST00000420482 BDP1A6H8Y1 2624 aa24.35■■□□□ 1.49
PTPN4-202ENST00000420482 CTSHP09668 335 aa24.35■■□□□ 1.49
PTPN4-202ENST00000420482 POU3F3P20264 500 aaPredicted RBP24.35■■□□□ 1.49
PTPN4-202ENST00000420482 CDC27P30260 824 aa24.35■■□□□ 1.49
PTPN4-202ENST00000420482 ZNF76P36508 570 aa24.35■■□□□ 1.49
PTPN4-202ENST00000420482 APOBRQ0VD83 1088 aa24.35■■□□□ 1.49
PTPN4-202ENST00000420482 PFKFB3Q16875 520 aaPredicted RBP24.35■■□□□ 1.49
PTPN4-202ENST00000420482 CEP55Q53EZ4 464 aa24.35■■□□□ 1.49
PTPN4-202ENST00000420482 INSL6Q9Y581 213 aa24.35■■□□□ 1.49
PTPN4-202ENST00000420482 SNX14Q9Y5W7 946 aa24.35■■□□□ 1.49
PTPN4-202ENST00000420482 TCF20Q9UGU0 1960 aaKnown RBP24.34■■□□□ 1.49
PTPN4-202ENST00000420482 GSTTP1A0A1W2PQM5 241 aa24.34■■□□□ 1.49
PTPN4-202ENST00000420482 EPB41L2O43491 1005 aaKnown RBP24.34■■□□□ 1.49
PTPN4-202ENST00000420482 SCG2P13521 617 aa24.34■■□□□ 1.49
PTPN4-202ENST00000420482 ADAM17P78536 824 aa24.34■■□□□ 1.49
PTPN4-202ENST00000420482 MRPS5P82675 430 aaKnown RBP24.34■■□□□ 1.49
PTPN4-202ENST00000420482 TYW1BQ6NUM6 668 aa24.34■■□□□ 1.49
PTPN4-202ENST00000420482 FBXL16Q8N461 479 aa24.34■■□□□ 1.49
PTPN4-202ENST00000420482 C6orf50Q9HD87 102 aa24.34■■□□□ 1.49
PTPN4-202ENST00000420482 NFASCO94856 1347 aa24.34■■□□□ 1.49
PTPN4-202ENST00000420482 COL4A4P53420 1690 aaPredicted RBP24.34■■□□□ 1.49
PTPN4-202ENST00000420482 MARK3P27448 753 aa24.33■■□□□ 1.49
PTPN4-202ENST00000420482 ADD1P35611 737 aaKnown RBP24.33■■□□□ 1.49
PTPN4-202ENST00000420482 SREBF1P36956 1147 aa24.33■■□□□ 1.49
PTPN4-202ENST00000420482 GRIK4Q16099 956 aa24.33■■□□□ 1.49
PTPN4-202ENST00000420482 MYOCDQ8IZQ8 938 aa24.33■■□□□ 1.49
PTPN4-202ENST00000420482 FAM217BQ9NTX9 383 aaPredicted RBP24.33■■□□□ 1.49
PTPN4-202ENST00000420482 TUBE1Q9UJT0 475 aa24.33■■□□□ 1.49
PTPN4-202ENST00000420482 RRN3P2A6NIE6 340 aa24.32■■□□□ 1.48
PTPN4-202ENST00000420482 RPS6KB1P23443 525 aa24.32■■□□□ 1.48
PTPN4-202ENST00000420482 GNA11P29992 359 aa24.32■■□□□ 1.48
PTPN4-202ENST00000420482 SKIV2LQ15477 1246 aaKnown RBP24.32■■□□□ 1.48
PTPN4-202ENST00000420482 AAK1Q2M2I8 961 aa24.32■■□□□ 1.48
PTPN4-202ENST00000420482 FAM26DQ5JW98 314 aa24.32■■□□□ 1.48
PTPN4-202ENST00000420482 NIPA1Q7RTP0 329 aa24.32■■□□□ 1.48
PTPN4-202ENST00000420482 RPAINQ86UA6 219 aa24.32■■□□□ 1.48
PTPN4-202ENST00000420482 PGBD1Q96JS3 809 aa24.32■■□□□ 1.48
PTPN4-202ENST00000420482 TGS1Q96RS0 853 aaKnown RBP24.32■■□□□ 1.48
PTPN4-202ENST00000420482 TELO2Q9Y4R8 837 aa24.32■■□□□ 1.48
PTPN4-202ENST00000420482 ESYT2A0FGR8 921 aa24.31■■□□□ 1.48
PTPN4-202ENST00000420482 CPA1P15085 419 aa24.31■■□□□ 1.48
PTPN4-202ENST00000420482 CLK2P49760 499 aaKnown RBP24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms