RNA–Protein interactions for RNA: ENST00000420455.5

TMEM50B-201, Transcript of transmembrane protein 50B, humanhuman

TSL 1 (best)

Gene TMEM50B, Length 3,062 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-201ENST00000420455 SPATC1LQ9H0A9 340 aa14.93□□□□□ -0.02
TMEM50B-201ENST00000420455 DNM3Q9UQ16 869 aa14.93□□□□□ -0.02
TMEM50B-201ENST00000420455 KIAA1217Q5T5P2 1943 aa14.93□□□□□ -0.02
TMEM50B-201ENST00000420455 A0A1B0GTH6 734 aa14.93□□□□□ -0.02
TMEM50B-201ENST00000420455 RGS20O76081 388 aa14.93□□□□□ -0.02
TMEM50B-201ENST00000420455 LYPLA2O95372 231 aa14.93□□□□□ -0.02
TMEM50B-201ENST00000420455 NR3C2P08235 984 aa14.93□□□□□ -0.02
TMEM50B-201ENST00000420455 COPB2P35606 906 aa14.93□□□□□ -0.02
TMEM50B-201ENST00000420455 SNAPC2Q13487 334 aa14.93□□□□□ -0.02
TMEM50B-201ENST00000420455 MS4A4AQ96JQ5 239 aa14.93□□□□□ -0.02
TMEM50B-201ENST00000420455 LIMA1Q9UHB6 759 aaKnown RBP14.93□□□□□ -0.02
TMEM50B-201ENST00000420455 ASTN1O14525 1302 aa14.93□□□□□ -0.02
TMEM50B-201ENST00000420455 WDR81Q562E7 1941 aa14.93□□□□□ -0.02
TMEM50B-201ENST00000420455 TRAF5O00463 557 aa14.92□□□□□ -0.02
TMEM50B-201ENST00000420455 COBLO75128 1261 aa14.92□□□□□ -0.02
TMEM50B-201ENST00000420455 FCER1AP12319 257 aa14.92□□□□□ -0.02
TMEM50B-201ENST00000420455 EDNRBP24530 442 aa14.92□□□□□ -0.02
TMEM50B-201ENST00000420455 PABPC4Q13310 644 aaKnown RBP eCLIP14.92□□□□□ -0.02
TMEM50B-201ENST00000420455 NR1I3Q14994 352 aa14.92□□□□□ -0.02
TMEM50B-201ENST00000420455 MAP1SQ66K74 1059 aaPredicted RBP14.92□□□□□ -0.02
TMEM50B-201ENST00000420455 CENPPQ6IPU0 288 aa14.92□□□□□ -0.02
TMEM50B-201ENST00000420455 GUF1Q8N442 669 aaKnown RBP14.92□□□□□ -0.02
TMEM50B-201ENST00000420455 RBPJLQ9UBG7 517 aa14.92□□□□□ -0.02
TMEM50B-201ENST00000420455 USP27XA6NNY8 438 aa14.92□□□□□ -0.02
TMEM50B-201ENST00000420455 SERPINC1P01008 464 aa14.92□□□□□ -0.02
TMEM50B-201ENST00000420455 PMS1P54277 932 aaKnown RBP14.92□□□□□ -0.02
TMEM50B-201ENST00000420455 STX17P56962 302 aa14.92□□□□□ -0.02
TMEM50B-201ENST00000420455 TTLL12Q14166 644 aaPredicted RBP14.92□□□□□ -0.02
TMEM50B-201ENST00000420455 DYDC2Q96IM9 177 aa14.92□□□□□ -0.02
TMEM50B-201ENST00000420455 WRAP73Q9P2S5 460 aaPredicted RBP14.92□□□□□ -0.02
TMEM50B-201ENST00000420455 R3HCC1Q9Y3T6 440 aaKnown RBP14.92□□□□□ -0.02
TMEM50B-201ENST00000420455 NFASCO94856 1347 aa14.92□□□□□ -0.02
TMEM50B-201ENST00000420455 TRPM7Q96QT4 1865 aa14.92□□□□□ -0.02
TMEM50B-201ENST00000420455 SLC25A27O95847 323 aa14.91□□□□□ -0.02
TMEM50B-201ENST00000420455 CCNE1P24864 410 aa14.91□□□□□ -0.02
TMEM50B-201ENST00000420455 GSDMDP57764 484 aa14.91□□□□□ -0.02
TMEM50B-201ENST00000420455 STIM1Q13586 685 aa14.91□□□□□ -0.02
TMEM50B-201ENST00000420455 GIT2Q14161 759 aa14.91□□□□□ -0.02
TMEM50B-201ENST00000420455 KLHL10Q6JEL2 608 aa14.91□□□□□ -0.02
TMEM50B-201ENST00000420455 IRF2BP1Q8IU81 584 aa14.91□□□□□ -0.02
TMEM50B-201ENST00000420455 RDM1Q8NG50 284 aa14.91□□□□□ -0.02
TMEM50B-201ENST00000420455 GTF3C2Q8WUA4 911 aaPredicted RBP14.91□□□□□ -0.02
TMEM50B-201ENST00000420455 DUSP9Q99956 384 aaKnown RBP14.91□□□□□ -0.02
TMEM50B-201ENST00000420455 THAP9Q9H5L6 903 aa14.91□□□□□ -0.02
TMEM50B-201ENST00000420455 RGL1Q9NZL6 768 aa14.91□□□□□ -0.02
TMEM50B-201ENST00000420455 KCND2Q9NZV8 630 aa14.91□□□□□ -0.02
TMEM50B-201ENST00000420455 PSMA7O14818 248 aa14.91□□□□□ -0.02
TMEM50B-201ENST00000420455 SKILP12757 684 aa14.91□□□□□ -0.02
TMEM50B-201ENST00000420455 ICAM3P32942 547 aa14.91□□□□□ -0.02
TMEM50B-201ENST00000420455 COASYQ13057 564 aa14.91□□□□□ -0.02
TMEM50B-201ENST00000420455 TBX2Q13207 712 aaPredicted RBP14.91□□□□□ -0.02
TMEM50B-201ENST00000420455 NOC3LQ8WTT2 800 aaKnown RBP14.91□□□□□ -0.02
TMEM50B-201ENST00000420455 RRAGCQ9HB90 399 aa14.91□□□□□ -0.02
TMEM50B-201ENST00000420455 OSBPP22059 807 aa14.91□□□□□ -0.02
TMEM50B-201ENST00000420455 PBX1P40424 430 aa14.91□□□□□ -0.02
TMEM50B-201ENST00000420455 IRX3P78415 501 aaPredicted RBP14.91□□□□□ -0.02
TMEM50B-201ENST00000420455 GPBP1Q86WP2 473 aa14.91□□□□□ -0.02
TMEM50B-201ENST00000420455 P2RX5Q93086 422 aa14.91□□□□□ -0.02
TMEM50B-201ENST00000420455 SLC10A4Q96EP9 437 aa14.91□□□□□ -0.02
TMEM50B-201ENST00000420455 ZFP91Q96JP5 570 aaPredicted RBP14.91□□□□□ -0.02
TMEM50B-201ENST00000420455 MOV10L1Q9BXT6 1211 aaKnown RBP14.91□□□□□ -0.02
TMEM50B-201ENST00000420455 DYMQ7RTS9 669 aa14.9□□□□□ -0.02
TMEM50B-201ENST00000420455 BMP2KQ9NSY1 1161 aaPredicted RBP14.9□□□□□ -0.02
TMEM50B-201ENST00000420455 PANK4Q9NVE7 773 aa14.9□□□□□ -0.02
TMEM50B-201ENST00000420455 ADD3Q9UEY8 706 aaKnown RBP14.9□□□□□ -0.02
TMEM50B-201ENST00000420455 BICDL2A1A5D9 508 aa14.9□□□□□ -0.02
TMEM50B-201ENST00000420455 SPATA31C2B4DYI2 1134 aa14.9□□□□□ -0.02
TMEM50B-201ENST00000420455 KCNA2P16389 499 aa14.9□□□□□ -0.02
TMEM50B-201ENST00000420455 C1orf186Q6ZWK4 172 aa14.9□□□□□ -0.02
TMEM50B-201ENST00000420455 NLRX1Q86UT6 975 aa14.9□□□□□ -0.02
TMEM50B-201ENST00000420455 FAM133AQ8N9E0 248 aa14.9□□□□□ -0.02
TMEM50B-201ENST00000420455 SHCBP1Q8NEM2 672 aa14.9□□□□□ -0.02
TMEM50B-201ENST00000420455 NACC1Q96RE7 527 aa14.9□□□□□ -0.02
TMEM50B-201ENST00000420455 CTAGE1Q96RT6 745 aa14.9□□□□□ -0.02
TMEM50B-201ENST00000420455 SEMA6BQ9H3T3 888 aa14.9□□□□□ -0.02
TMEM50B-201ENST00000420455 TXNRD2Q9NNW7 524 aa14.9□□□□□ -0.02
TMEM50B-201ENST00000420455 ATP9AO75110 1047 aa14.89□□□□□ -0.03
TMEM50B-201ENST00000420455 GOLGA8FQ08AF8 430 aa14.89□□□□□ -0.03
TMEM50B-201ENST00000420455 GOLGA8DPQ0D2H9 430 aa14.89□□□□□ -0.03
TMEM50B-201ENST00000420455 DHX8Q14562 1220 aaKnown RBP14.89□□□□□ -0.03
TMEM50B-201ENST00000420455 CCDC65Q8IXS2 484 aa14.89□□□□□ -0.03
TMEM50B-201ENST00000420455 DBR1Q9UK59 544 aaKnown RBP14.89□□□□□ -0.03
TMEM50B-201ENST00000420455 CLEC11AQ9Y240 323 aa14.89□□□□□ -0.03
TMEM50B-201ENST00000420455 DNAJC25-GNG10A0A024R161 153 aa14.89□□□□□ -0.03
TMEM50B-201ENST00000420455 P4HBP07237 508 aaKnown RBP14.89□□□□□ -0.03
TMEM50B-201ENST00000420455 SFNP31947 248 aa14.89□□□□□ -0.03
TMEM50B-201ENST00000420455 JAK3P52333 1124 aa14.89□□□□□ -0.03
TMEM50B-201ENST00000420455 SPAG1Q07617 926 aa14.89□□□□□ -0.03
TMEM50B-201ENST00000420455 CTTNQ14247 550 aaKnown RBP14.89□□□□□ -0.03
TMEM50B-201ENST00000420455 PLS1Q14651 629 aa14.89□□□□□ -0.03
TMEM50B-201ENST00000420455 ZCWPW2Q504Y3 356 aa14.89□□□□□ -0.03
TMEM50B-201ENST00000420455 TCP11X2Q5H9J9 407 aa14.89□□□□□ -0.03
TMEM50B-201ENST00000420455 ZNF746Q6NUN9 644 aaPredicted RBP14.89□□□□□ -0.03
TMEM50B-201ENST00000420455 RINT1Q6NUQ1 792 aa14.89□□□□□ -0.03
TMEM50B-201ENST00000420455 EPM2AIP1Q7L775 607 aaPredicted RBP14.89□□□□□ -0.03
TMEM50B-201ENST00000420455 ZC3H3Q8IXZ2 948 aaKnown RBP14.89□□□□□ -0.03
TMEM50B-201ENST00000420455 CDHR1Q96JP9 859 aa14.89□□□□□ -0.03
TMEM50B-201ENST00000420455 TMX1Q9H3N1 280 aa14.89□□□□□ -0.03
TMEM50B-201ENST00000420455 KCND1Q9NSA2 647 aa14.89□□□□□ -0.03
TMEM50B-201ENST00000420455 KRT76Q01546 638 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms