RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 TCP1P17987 556 aaKnown RBP13.1□□□□□ -0.31
LIMK1-202ENST00000418310 GNGT1P63211 74 aa13.1□□□□□ -0.31
LIMK1-202ENST00000418310 KCNA1Q09470 495 aa13.1□□□□□ -0.31
LIMK1-202ENST00000418310 PDCLQ13371 301 aa13.1□□□□□ -0.31
LIMK1-202ENST00000418310 FIGNQ5HY92 759 aa13.1□□□□□ -0.31
LIMK1-202ENST00000418310 SCFD1Q8WVM8 642 aa13.1□□□□□ -0.31
LIMK1-202ENST00000418310 RBM17Q96I25 401 aaKnown RBP13.1□□□□□ -0.31
LIMK1-202ENST00000418310 PCDHB13Q9Y5F0 798 aa13.1□□□□□ -0.31
LIMK1-202ENST00000418310 TARSL2A2RTX5 802 aaKnown RBP13.09□□□□□ -0.31
LIMK1-202ENST00000418310 KCNK3O14649 394 aa13.09□□□□□ -0.31
LIMK1-202ENST00000418310 IVLP07476 585 aa13.09□□□□□ -0.31
LIMK1-202ENST00000418310 CCDC65Q8IXS2 484 aa13.09□□□□□ -0.31
LIMK1-202ENST00000418310 CYP2W1Q8TAV3 490 aa13.09□□□□□ -0.31
LIMK1-202ENST00000418310 AP1M1Q9BXS5 423 aa13.09□□□□□ -0.31
LIMK1-202ENST00000418310 ZC3H12CQ9C0D7 883 aaKnown RBP13.09□□□□□ -0.31
LIMK1-202ENST00000418310 RIC8AQ9NPQ8 531 aa13.09□□□□□ -0.31
LIMK1-202ENST00000418310 PPP1R2P41236 205 aa13.09□□□□□ -0.31
LIMK1-202ENST00000418310 KCNH2Q12809 1159 aa13.09□□□□□ -0.31
LIMK1-202ENST00000418310 PLS1Q14651 629 aa13.09□□□□□ -0.31
LIMK1-202ENST00000418310 ADAT2Q7Z6V5 191 aaKnown RBP13.09□□□□□ -0.31
LIMK1-202ENST00000418310 AENQ8WTP8 325 aaKnown RBP13.09□□□□□ -0.31
LIMK1-202ENST00000418310 ZBTB5O15062 677 aa13.09□□□□□ -0.31
LIMK1-202ENST00000418310 MYBP10242 640 aa13.09□□□□□ -0.31
LIMK1-202ENST00000418310 GYS1P13807 737 aa13.09□□□□□ -0.31
LIMK1-202ENST00000418310 SHMT1P34896 483 aa13.09□□□□□ -0.31
LIMK1-202ENST00000418310 ASIC2Q16515 512 aa13.09□□□□□ -0.31
LIMK1-202ENST00000418310 TMEM119Q4V9L6 283 aa13.09□□□□□ -0.31
LIMK1-202ENST00000418310 NAA35Q5VZE5 725 aa13.09□□□□□ -0.31
LIMK1-202ENST00000418310 SFR1Q86XK3 245 aa13.09□□□□□ -0.31
LIMK1-202ENST00000418310 DDX42Q86XP3 938 aaKnown RBP eCLIP13.09□□□□□ -0.31
LIMK1-202ENST00000418310 SLF2Q8IX21 1173 aa13.09□□□□□ -0.31
LIMK1-202ENST00000418310 ANO3Q9BYT9 981 aa13.09□□□□□ -0.31
LIMK1-202ENST00000418310 UTRNP46939 3433 aa13.09□□□□□ -0.31
LIMK1-202ENST00000418310 IL1R1P14778 569 aa13.08□□□□□ -0.32
LIMK1-202ENST00000418310 CYP11B2P19099 503 aa13.08□□□□□ -0.32
LIMK1-202ENST00000418310 SF3A3Q12874 501 aaKnown RBP eCLIP13.08□□□□□ -0.32
LIMK1-202ENST00000418310 CFAP221Q4G0U5 840 aa13.08□□□□□ -0.32
LIMK1-202ENST00000418310 BCAS4Q8TDM0 211 aa13.08□□□□□ -0.32
LIMK1-202ENST00000418310 PIGOQ8TEQ8 1089 aa13.08□□□□□ -0.32
LIMK1-202ENST00000418310 MYH1P12882 1939 aa13.08□□□□□ -0.32
LIMK1-202ENST00000418310 ESYT2A0FGR8 921 aa13.08□□□□□ -0.32
LIMK1-202ENST00000418310 HSF2BPO75031 334 aa13.08□□□□□ -0.32
LIMK1-202ENST00000418310 EEF2P13639 858 aaKnown RBP13.08□□□□□ -0.32
LIMK1-202ENST00000418310 AARSP49588 968 aaKnown RBP eCLIP13.08□□□□□ -0.32
LIMK1-202ENST00000418310 CASP4P49662 377 aa13.08□□□□□ -0.32
LIMK1-202ENST00000418310 CDC37Q16543 378 aaPredicted RBP13.08□□□□□ -0.32
LIMK1-202ENST00000418310 TBC1D10BQ4KMP7 808 aaPredicted RBP13.08□□□□□ -0.32
LIMK1-202ENST00000418310 MAATS1Q7Z4T9 603 aa13.08□□□□□ -0.32
LIMK1-202ENST00000418310 ZIM3Q96PE6 472 aa13.08□□□□□ -0.32
LIMK1-202ENST00000418310 SEPT11Q9NVA2 429 aaKnown RBP13.08□□□□□ -0.32
LIMK1-202ENST00000418310 RGL1Q9NZL6 768 aa13.08□□□□□ -0.32
LIMK1-202ENST00000418310 NAV1Q8NEY1 1877 aa13.08□□□□□ -0.32
LIMK1-202ENST00000418310 CEP104O60308 925 aa13.07□□□□□ -0.32
LIMK1-202ENST00000418310 HPDP32754 393 aaPredicted RBP13.07□□□□□ -0.32
LIMK1-202ENST00000418310 PDIA5Q14554 519 aa13.07□□□□□ -0.32
LIMK1-202ENST00000418310 SEPT2Q15019 361 aa13.07□□□□□ -0.32
LIMK1-202ENST00000418310 CDC42EP5Q6NZY7 148 aa13.07□□□□□ -0.32
LIMK1-202ENST00000418310 MMGT1Q8N4V1 131 aa13.07□□□□□ -0.32
LIMK1-202ENST00000418310 P2RX7Q99572 595 aaKnown RBP13.07□□□□□ -0.32
LIMK1-202ENST00000418310 VIPAS39Q9H9C1 493 aa13.07□□□□□ -0.32
LIMK1-202ENST00000418310 CEP72Q9P209 647 aa13.07□□□□□ -0.32
LIMK1-202ENST00000418310 HDAC9Q9UKV0 1011 aa13.07□□□□□ -0.32
LIMK1-202ENST00000418310 ATP6V0A2Q9Y487 856 aa13.07□□□□□ -0.32
LIMK1-202ENST00000418310 DDX60LQ5H9U9 1706 aaKnown RBP13.07□□□□□ -0.32
LIMK1-202ENST00000418310 ZBTB39O15060 712 aa13.07□□□□□ -0.32
LIMK1-202ENST00000418310 CETN3O15182 167 aa13.07□□□□□ -0.32
LIMK1-202ENST00000418310 SERPING1P05155 500 aa13.07□□□□□ -0.32
LIMK1-202ENST00000418310 CDK17Q00537 523 aa13.07□□□□□ -0.32
LIMK1-202ENST00000418310 PTK2Q05397 1052 aa13.07□□□□□ -0.32
LIMK1-202ENST00000418310 DDR1Q08345 913 aa13.07□□□□□ -0.32
LIMK1-202ENST00000418310 MAEAQ7L5Y9 396 aa13.07□□□□□ -0.32
LIMK1-202ENST00000418310 OR2W6PQ8NHA6 318 aa13.07□□□□□ -0.32
LIMK1-202ENST00000418310 TRIM31Q9BZY9 425 aa13.07□□□□□ -0.32
LIMK1-202ENST00000418310 GCNT3O95395 438 aa13.07□□□□□ -0.32
LIMK1-202ENST00000418310 HLA-DOAP06340 250 aa13.07□□□□□ -0.32
LIMK1-202ENST00000418310 HNRNPH3P31942 346 aaKnown RBP13.07□□□□□ -0.32
LIMK1-202ENST00000418310 ZNF76P36508 570 aa13.07□□□□□ -0.32
LIMK1-202ENST00000418310 TTMPQ5BVD1 217 aa13.07□□□□□ -0.32
LIMK1-202ENST00000418310 RDH13Q8NBN7 331 aa13.07□□□□□ -0.32
LIMK1-202ENST00000418310 CAPS2Q9BXY5 557 aa13.07□□□□□ -0.32
LIMK1-202ENST00000418310 BHMT2Q9H2M3 363 aa13.07□□□□□ -0.32
LIMK1-202ENST00000418310 PKD2L1Q9P0L9 805 aa13.07□□□□□ -0.32
LIMK1-202ENST00000418310 BCCIPQ9P287 314 aaKnown RBP eCLIP13.07□□□□□ -0.32
LIMK1-202ENST00000418310 PPEF1O14829 653 aaPredicted RBP13.06□□□□□ -0.32
LIMK1-202ENST00000418310 LIG3P49916 1009 aa13.06□□□□□ -0.32
LIMK1-202ENST00000418310 ZCWPW2Q504Y3 356 aa13.06□□□□□ -0.32
LIMK1-202ENST00000418310 ARSHQ5FYA8 562 aa13.06□□□□□ -0.32
LIMK1-202ENST00000418310 SLFN13Q68D06 897 aa13.06□□□□□ -0.32
LIMK1-202ENST00000418310 CATSPER3Q86XQ3 398 aa13.06□□□□□ -0.32
LIMK1-202ENST00000418310 TBC1D22AQ8WUA7 517 aa13.06□□□□□ -0.32
LIMK1-202ENST00000418310 TAF4BQ92750 862 aa13.06□□□□□ -0.32
LIMK1-202ENST00000418310 REEP2Q9BRK0 252 aa13.06□□□□□ -0.32
LIMK1-202ENST00000418310 IRAK1P51617 712 aa13.06□□□□□ -0.32
LIMK1-202ENST00000418310 EPHB4P54760 987 aa13.06□□□□□ -0.32
LIMK1-202ENST00000418310 GABPAQ06546 454 aa13.06□□□□□ -0.32
LIMK1-202ENST00000418310 PRPF4BQ13523 1007 aaKnown RBP13.06□□□□□ -0.32
LIMK1-202ENST00000418310 ZYXQ15942 572 aaKnown RBP13.06□□□□□ -0.32
LIMK1-202ENST00000418310 ASTE1Q2TB18 679 aaPredicted RBP13.06□□□□□ -0.32
LIMK1-202ENST00000418310 CFAP58Q5T655 872 aa13.06□□□□□ -0.32
LIMK1-202ENST00000418310 AJAP1Q9UKB5 411 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms