RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 KRT16P08779 473 aa8.77□□□□□ -1.01
HMGXB4-202ENST00000418170 TATP17735 454 aaPredicted RBP8.77□□□□□ -1.01
HMGXB4-202ENST00000418170 DHX9Q08211 1270 aaKnown RBP8.77□□□□□ -1.01
HMGXB4-202ENST00000418170 TBC1D25Q3MII6 688 aa8.77□□□□□ -1.01
HMGXB4-202ENST00000418170 TDRD12Q587J7 1177 aaKnown RBP8.77□□□□□ -1.01
HMGXB4-202ENST00000418170 APLFQ8IW19 511 aaPredicted RBP8.77□□□□□ -1.01
HMGXB4-202ENST00000418170 ZFAND2BQ8WV99 257 aa8.77□□□□□ -1.01
HMGXB4-202ENST00000418170 ECT2Q9H8V3 914 aa8.77□□□□□ -1.01
HMGXB4-202ENST00000418170 DOCK2Q92608 1830 aa8.77□□□□□ -1.01
HMGXB4-202ENST00000418170 TNKSO95271 1327 aa8.77□□□□□ -1.01
HMGXB4-202ENST00000418170 ABCB11O95342 1321 aa8.77□□□□□ -1.01
HMGXB4-202ENST00000418170 NBPF26B4DH59 902 aa8.77□□□□□ -1.01
HMGXB4-202ENST00000418170 KCNK3O14649 394 aa8.77□□□□□ -1.01
HMGXB4-202ENST00000418170 PLEKHA8P1O95397 391 aa8.77□□□□□ -1.01
HMGXB4-202ENST00000418170 GNAT1P11488 350 aa8.77□□□□□ -1.01
HMGXB4-202ENST00000418170 STK4Q13043 487 aa8.77□□□□□ -1.01
HMGXB4-202ENST00000418170 TAF11Q15544 211 aa8.77□□□□□ -1.01
HMGXB4-202ENST00000418170 MAN2A1Q16706 1144 aa8.77□□□□□ -1.01
HMGXB4-202ENST00000418170 SLC9C1Q4G0N8 1177 aa8.77□□□□□ -1.01
HMGXB4-202ENST00000418170 KRT28Q7Z3Y7 464 aa8.77□□□□□ -1.01
HMGXB4-202ENST00000418170 GALNT15Q8N3T1 639 aa8.77□□□□□ -1.01
HMGXB4-202ENST00000418170 NBPF15Q8N660 670 aa8.77□□□□□ -1.01
HMGXB4-202ENST00000418170 GBP7Q8N8V2 638 aaPredicted RBP8.77□□□□□ -1.01
HMGXB4-202ENST00000418170 PBKQ96KB5 322 aa8.77□□□□□ -1.01
HMGXB4-202ENST00000418170 NSRP1Q9H0G5 558 aaKnown RBP8.77□□□□□ -1.01
HMGXB4-202ENST00000418170 ARHGEF3Q9NR81 526 aa8.77□□□□□ -1.01
HMGXB4-202ENST00000418170 ADAM22Q9P0K1 906 aa8.77□□□□□ -1.01
HMGXB4-202ENST00000418170 ANKIB1Q9P2G1 1089 aa8.77□□□□□ -1.01
HMGXB4-202ENST00000418170 DOT1LQ8TEK3 1739 aa8.76□□□□□ -1.01
HMGXB4-202ENST00000418170 DPPA5A6NC42 116 aa8.76□□□□□ -1.01
HMGXB4-202ENST00000418170 A8MUI8 341 aa8.76□□□□□ -1.01
HMGXB4-202ENST00000418170 KIF5BP33176 963 aa8.76□□□□□ -1.01
HMGXB4-202ENST00000418170 CCDC38Q502W7 563 aa8.76□□□□□ -1.01
HMGXB4-202ENST00000418170 ANKS1AQ92625 1134 aa8.76□□□□□ -1.01
HMGXB4-202ENST00000418170 KLHL29Q96CT2 875 aa8.76□□□□□ -1.01
HMGXB4-202ENST00000418170 PGM2Q96G03 612 aa8.76□□□□□ -1.01
HMGXB4-202ENST00000418170 TMX4Q9H1E5 349 aaPredicted RBP8.76□□□□□ -1.01
HMGXB4-202ENST00000418170 RNF41Q9H4P4 317 aaPredicted RBP8.76□□□□□ -1.01
HMGXB4-202ENST00000418170 ANKRD36CQ5JPF3 1778 aa8.76□□□□□ -1.01
HMGXB4-202ENST00000418170 COL5A3P25940 1745 aaPredicted RBP8.76□□□□□ -1.01
HMGXB4-202ENST00000418170 CCDC188H7C350 402 aa8.76□□□□□ -1.01
HMGXB4-202ENST00000418170 PPFIA2O75334 1257 aa8.76□□□□□ -1.01
HMGXB4-202ENST00000418170 OAS1P00973 400 aaKnown RBP8.76□□□□□ -1.01
HMGXB4-202ENST00000418170 PHKG2P15735 406 aa8.76□□□□□ -1.01
HMGXB4-202ENST00000418170 MSH2P43246 934 aa8.76□□□□□ -1.01
HMGXB4-202ENST00000418170 PDE4DQ08499 809 aa8.76□□□□□ -1.01
HMGXB4-202ENST00000418170 BNIP1Q12981 228 aa8.76□□□□□ -1.01
HMGXB4-202ENST00000418170 RPS6KA1Q15418 735 aa8.76□□□□□ -1.01
HMGXB4-202ENST00000418170 GNPTABQ3T906 1256 aa8.76□□□□□ -1.01
HMGXB4-202ENST00000418170 COBLL1Q53SF7 1204 aa8.76□□□□□ -1.01
HMGXB4-202ENST00000418170 TXLNGYQ9BZA5 131 aa8.76□□□□□ -1.01
HMGXB4-202ENST00000418170 CCSER1Q9C0I3 900 aa8.76□□□□□ -1.01
HMGXB4-202ENST00000418170 RAB17Q9H0T7 212 aa8.76□□□□□ -1.01
HMGXB4-202ENST00000418170 ARMT1Q9H993 441 aa8.76□□□□□ -1.01
HMGXB4-202ENST00000418170 SNX3O60493 162 aa8.76□□□□□ -1.01
HMGXB4-202ENST00000418170 SMIM24O75264 130 aa8.76□□□□□ -1.01
HMGXB4-202ENST00000418170 WFS1O76024 890 aa8.76□□□□□ -1.01
HMGXB4-202ENST00000418170 SERPING1P05155 500 aa8.76□□□□□ -1.01
HMGXB4-202ENST00000418170 COPS2P61201 443 aa8.76□□□□□ -1.01
HMGXB4-202ENST00000418170 LACTBP83111 547 aaPredicted RBP8.76□□□□□ -1.01
HMGXB4-202ENST00000418170 SF3A3Q12874 501 aaKnown RBP eCLIP8.76□□□□□ -1.01
HMGXB4-202ENST00000418170 CCDC178Q5BJE1 867 aa8.76□□□□□ -1.01
HMGXB4-202ENST00000418170 MTHFD1LQ6UB35 978 aa8.76□□□□□ -1.01
HMGXB4-202ENST00000418170 GIGYF2Q6Y7W6 1299 aaKnown RBP8.76□□□□□ -1.01
HMGXB4-202ENST00000418170 SYN2Q92777 582 aaPredicted RBP8.76□□□□□ -1.01
HMGXB4-202ENST00000418170 SELENOSQ9BQE4 189 aa8.76□□□□□ -1.01
HMGXB4-202ENST00000418170 MTFR1LQ9H019 292 aa8.76□□□□□ -1.01
HMGXB4-202ENST00000418170 DDX47Q9H0S4 455 aaKnown RBP8.76□□□□□ -1.01
HMGXB4-202ENST00000418170 SLITRK6Q9H5Y7 841 aa8.76□□□□□ -1.01
HMGXB4-202ENST00000418170 ARHGEF10LQ9HCE6 1279 aa8.76□□□□□ -1.01
HMGXB4-202ENST00000418170 PP2D1A8MPX8 630 aa8.75□□□□□ -1.01
HMGXB4-202ENST00000418170 PGRMC1O00264 195 aaKnown RBP8.75□□□□□ -1.01
HMGXB4-202ENST00000418170 FLOT1O75955 427 aa8.75□□□□□ -1.01
HMGXB4-202ENST00000418170 KIF4AO95239 1232 aa8.75□□□□□ -1.01
HMGXB4-202ENST00000418170 NPTXRO95502 500 aa8.75□□□□□ -1.01
HMGXB4-202ENST00000418170 USP11P51784 963 aa8.75□□□□□ -1.01
HMGXB4-202ENST00000418170 ATP11AP98196 1134 aa8.75□□□□□ -1.01
HMGXB4-202ENST00000418170 METTL24Q5JXM2 366 aa8.75□□□□□ -1.01
HMGXB4-202ENST00000418170 CENPPQ6IPU0 288 aa8.75□□□□□ -1.01
HMGXB4-202ENST00000418170 PROSER2Q86WR7 435 aaPredicted RBP8.75□□□□□ -1.01
HMGXB4-202ENST00000418170 IFT74Q96LB3 600 aa8.75□□□□□ -1.01
HMGXB4-202ENST00000418170 NACAP1Q9BZK3 213 aa8.75□□□□□ -1.01
HMGXB4-202ENST00000418170 SEMA6BQ9H3T3 888 aa8.75□□□□□ -1.01
HMGXB4-202ENST00000418170 CUEDC2Q9H467 287 aa8.75□□□□□ -1.01
HMGXB4-202ENST00000418170 MAGEF1Q9HAY2 307 aa8.75□□□□□ -1.01
HMGXB4-202ENST00000418170 INTS9Q9NV88 658 aaKnown RBP8.75□□□□□ -1.01
HMGXB4-202ENST00000418170 LRRC42Q9Y546 428 aa8.75□□□□□ -1.01
HMGXB4-202ENST00000418170 GPR75-ASB3A0A0A6YYF3 556 aa8.75□□□□□ -1.01
HMGXB4-202ENST00000418170 LRRD1A4D1F6 860 aa8.75□□□□□ -1.01
HMGXB4-202ENST00000418170 TLR2O60603 784 aa8.75□□□□□ -1.01
HMGXB4-202ENST00000418170 VIMP08670 466 aaKnown RBP8.75□□□□□ -1.01
HMGXB4-202ENST00000418170 NUDT17P0C025 328 aa8.75□□□□□ -1.01
HMGXB4-202ENST00000418170 UBA7P41226 1012 aa8.75□□□□□ -1.01
HMGXB4-202ENST00000418170 MRPS35P82673 323 aaKnown RBP8.75□□□□□ -1.01
HMGXB4-202ENST00000418170 SLC18A3Q16572 532 aa8.75□□□□□ -1.01
HMGXB4-202ENST00000418170 ANO7Q6IWH7 933 aa8.75□□□□□ -1.01
HMGXB4-202ENST00000418170 DTHD1Q6ZMT9 781 aa8.75□□□□□ -1.01
HMGXB4-202ENST00000418170 ASRGL1Q7L266 308 aa8.75□□□□□ -1.01
HMGXB4-202ENST00000418170 LRRC15Q8TF66 581 aa8.75□□□□□ -1.01
HMGXB4-202ENST00000418170 PRMT1Q99873 361 aaKnown RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms