RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 ASMTLO95671 621 aa7.42□□□□□ -1.22
NIFKP3-201ENST00000417799 PABPC1P11940 636 aaKnown RBP7.42□□□□□ -1.22
NIFKP3-201ENST00000417799 HOXA10P31260 410 aaPredicted RBP7.42□□□□□ -1.22
NIFKP3-201ENST00000417799 HOXC12P31275 282 aa7.42□□□□□ -1.22
NIFKP3-201ENST00000417799 NOP2P46087 812 aaKnown RBP7.42□□□□□ -1.22
NIFKP3-201ENST00000417799 EIF4A1P60842 406 aaKnown RBP7.42□□□□□ -1.22
NIFKP3-201ENST00000417799 NSMFQ6X4W1 530 aa7.42□□□□□ -1.22
NIFKP3-201ENST00000417799 TTC5Q8N0Z6 440 aa7.42□□□□□ -1.22
NIFKP3-201ENST00000417799 Q8N3U1 123 aa7.42□□□□□ -1.22
NIFKP3-201ENST00000417799 TSPYL6Q8N831 410 aa7.42□□□□□ -1.22
NIFKP3-201ENST00000417799 C8orf58Q8NAV2 365 aa7.42□□□□□ -1.22
NIFKP3-201ENST00000417799 SYTL4Q96C24 671 aaPredicted RBP7.42□□□□□ -1.22
NIFKP3-201ENST00000417799 EXOC2Q96KP1 924 aa7.42□□□□□ -1.22
NIFKP3-201ENST00000417799 IER2Q9BTL4 223 aa7.42□□□□□ -1.22
NIFKP3-201ENST00000417799 NKX2-4Q9H2Z4 354 aa7.42□□□□□ -1.22
NIFKP3-201ENST00000417799 CYP26B1Q9NR63 512 aa7.42□□□□□ -1.22
NIFKP3-201ENST00000417799 SSU72P8A0A1W2PR75 194 aa7.41□□□□□ -1.22
NIFKP3-201ENST00000417799 ELL2O00472 640 aaPredicted RBP7.41□□□□□ -1.22
NIFKP3-201ENST00000417799 KCNQ2O43526 872 aa7.41□□□□□ -1.22
NIFKP3-201ENST00000417799 CD3EP07766 207 aa7.41□□□□□ -1.22
NIFKP3-201ENST00000417799 SNRPB2P08579 225 aaKnown RBP7.41□□□□□ -1.22
NIFKP3-201ENST00000417799 BMP8BP34820 402 aa7.41□□□□□ -1.22
NIFKP3-201ENST00000417799 TCEA2Q15560 299 aa7.41□□□□□ -1.22
NIFKP3-201ENST00000417799 KRT24Q2M2I5 525 aa7.41□□□□□ -1.22
NIFKP3-201ENST00000417799 GAB4Q2WGN9 574 aa7.41□□□□□ -1.22
NIFKP3-201ENST00000417799 TWISTNBQ3B726 338 aaPredicted RBP7.41□□□□□ -1.22
NIFKP3-201ENST00000417799 ZNF662Q6ZS27 426 aa7.41□□□□□ -1.22
NIFKP3-201ENST00000417799 SYNPOQ8N3V7 929 aa7.41□□□□□ -1.22
NIFKP3-201ENST00000417799 KISS1RQ969F8 398 aaPredicted RBP7.41□□□□□ -1.22
NIFKP3-201ENST00000417799 OSBP2Q969R2 916 aa7.41□□□□□ -1.22
NIFKP3-201ENST00000417799 HRASLS5Q96KN8 279 aa7.41□□□□□ -1.22
NIFKP3-201ENST00000417799 CCDC140Q96MF4 163 aa7.41□□□□□ -1.22
NIFKP3-201ENST00000417799 DUSP13Q9UII6 198 aa7.41□□□□□ -1.22
NIFKP3-201ENST00000417799 RCAN3Q9UKA8 241 aa7.41□□□□□ -1.22
NIFKP3-201ENST00000417799 ASAP1Q9ULH1 1129 aa7.41□□□□□ -1.22
NIFKP3-201ENST00000417799 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.41□□□□□ -1.22
NIFKP3-201ENST00000417799 MRPS23Q9Y3D9 190 aaKnown RBP7.41□□□□□ -1.22
NIFKP3-201ENST00000417799 SOS1Q07889 1333 aaPredicted RBP7.41□□□□□ -1.22
NIFKP3-201ENST00000417799 PITPNM2Q9BZ72 1349 aa7.41□□□□□ -1.22
NIFKP3-201ENST00000417799 SYPP08247 313 aa7.4□□□□□ -1.22
NIFKP3-201ENST00000417799 HOXB7P09629 217 aa7.4□□□□□ -1.22
NIFKP3-201ENST00000417799 VAV1P15498 845 aa7.4□□□□□ -1.22
NIFKP3-201ENST00000417799 GRIK1P39086 918 aa7.4□□□□□ -1.22
NIFKP3-201ENST00000417799 KCNJ6P48051 423 aa7.4□□□□□ -1.22
NIFKP3-201ENST00000417799 GFRA1P56159 465 aa7.4□□□□□ -1.22
NIFKP3-201ENST00000417799 PCBP3P57721 371 aaKnown RBP7.4□□□□□ -1.22
NIFKP3-201ENST00000417799 SF1Q15637 639 aaKnown RBP7.4□□□□□ -1.22
NIFKP3-201ENST00000417799 TMPRSS7Q7RTY8 843 aa7.4□□□□□ -1.22
NIFKP3-201ENST00000417799 KIAA0907Q7Z7F0 614 aaPredicted RBP7.4□□□□□ -1.22
NIFKP3-201ENST00000417799 LINC00116Q8NCU8 138 aa7.4□□□□□ -1.22
NIFKP3-201ENST00000417799 ASB11Q8WXH4 323 aa7.4□□□□□ -1.22
NIFKP3-201ENST00000417799 KCTD13Q8WZ19 329 aa7.4□□□□□ -1.22
NIFKP3-201ENST00000417799 ZNF496Q96IT1 587 aaPredicted RBP7.4□□□□□ -1.22
NIFKP3-201ENST00000417799 FCRL3Q96P31 734 aaPredicted RBP7.4□□□□□ -1.22
NIFKP3-201ENST00000417799 FMNL2Q96PY5 1086 aa7.4□□□□□ -1.22
NIFKP3-201ENST00000417799 MCMBPQ9BTE3 642 aa7.4□□□□□ -1.22
NIFKP3-201ENST00000417799 ATP13A1Q9HD20 1204 aa7.4□□□□□ -1.22
NIFKP3-201ENST00000417799 TCFL5Q9UL49 500 aa7.4□□□□□ -1.22
NIFKP3-201ENST00000417799 HEG1Q9ULI3 1381 aa7.4□□□□□ -1.22
NIFKP3-201ENST00000417799 RGS12O14924 1447 aa7.4□□□□□ -1.22
NIFKP3-201ENST00000417799 TOGARAM1Q9Y4F4 1720 aa7.4□□□□□ -1.23
NIFKP3-201ENST00000417799 SIPA1L3O60292 1781 aaPredicted RBP7.4□□□□□ -1.23
NIFKP3-201ENST00000417799 VIRMAQ69YN4 1812 aaKnown RBP7.39□□□□□ -1.23
NIFKP3-201ENST00000417799 STXBP3O00186 592 aa7.39□□□□□ -1.23
NIFKP3-201ENST00000417799 PPP1R12AO14974 1030 aaPredicted RBP7.39□□□□□ -1.23
NIFKP3-201ENST00000417799 DLX3O60479 287 aa7.39□□□□□ -1.23
NIFKP3-201ENST00000417799 CPP00450 1065 aa7.39□□□□□ -1.23
NIFKP3-201ENST00000417799 SNRPA1P09661 255 aaKnown RBP7.39□□□□□ -1.23
NIFKP3-201ENST00000417799 ECI1P42126 302 aa7.39□□□□□ -1.23
NIFKP3-201ENST00000417799 RARSP54136 660 aaKnown RBP7.39□□□□□ -1.23
NIFKP3-201ENST00000417799 SUMO1P63165 101 aaKnown RBP7.39□□□□□ -1.23
NIFKP3-201ENST00000417799 PRKCQQ04759 706 aa7.39□□□□□ -1.23
NIFKP3-201ENST00000417799 SCRN1Q12765 414 aa7.39□□□□□ -1.23
NIFKP3-201ENST00000417799 AOC3Q16853 763 aa7.39□□□□□ -1.23
NIFKP3-201ENST00000417799 TKFCQ3LXA3 575 aa7.39□□□□□ -1.23
NIFKP3-201ENST00000417799 ALDH1L2Q3SY69 923 aa7.39□□□□□ -1.23
NIFKP3-201ENST00000417799 CREG2Q8IUH2 290 aa7.39□□□□□ -1.23
NIFKP3-201ENST00000417799 FEZ1Q99689 392 aa7.39□□□□□ -1.23
NIFKP3-201ENST00000417799 SLC12A9Q9BXP2 914 aa7.39□□□□□ -1.23
NIFKP3-201ENST00000417799 CHMP4AQ9BY43 222 aa7.39□□□□□ -1.23
NIFKP3-201ENST00000417799 FOXP3Q9BZS1 431 aa7.39□□□□□ -1.23
NIFKP3-201ENST00000417799 SLKQ9H2G2 1235 aaPredicted RBP7.39□□□□□ -1.23
NIFKP3-201ENST00000417799 VAV3Q9UKW4 847 aa7.39□□□□□ -1.23
NIFKP3-201ENST00000417799 KAT6BQ8WYB5 2073 aa7.39□□□□□ -1.23
NIFKP3-201ENST00000417799 KDM3BQ7LBC6 1761 aa7.38□□□□□ -1.23
NIFKP3-201ENST00000417799 C2orf71A6NGG8 1288 aa7.38□□□□□ -1.23
NIFKP3-201ENST00000417799 AURKAO14965 403 aa7.38□□□□□ -1.23
NIFKP3-201ENST00000417799 BCAR3O75815 825 aa7.38□□□□□ -1.23
NIFKP3-201ENST00000417799 ZNF205O95201 554 aa7.38□□□□□ -1.23
NIFKP3-201ENST00000417799 SCG5P05408 212 aa7.38□□□□□ -1.23
NIFKP3-201ENST00000417799 IFNGR1P15260 489 aa7.38□□□□□ -1.23
NIFKP3-201ENST00000417799 MAP4K2Q12851 820 aa7.38□□□□□ -1.23
NIFKP3-201ENST00000417799 MSMPQ1L6U9 139 aa7.38□□□□□ -1.23
NIFKP3-201ENST00000417799 CCDC30Q5VVM6 783 aa7.38□□□□□ -1.23
NIFKP3-201ENST00000417799 INTS5Q6P9B9 1019 aaKnown RBP7.38□□□□□ -1.23
NIFKP3-201ENST00000417799 RNF111Q6ZNA4 994 aa7.38□□□□□ -1.23
NIFKP3-201ENST00000417799 PTF1AQ7RTS3 328 aa7.38□□□□□ -1.23
NIFKP3-201ENST00000417799 TMEM145Q8NBT3 493 aa7.38□□□□□ -1.23
NIFKP3-201ENST00000417799 SSH1Q8WYL5 1049 aa7.38□□□□□ -1.23
NIFKP3-201ENST00000417799 MISP3Q96FF7 219 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms