RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 ADCY7P51828 1080 aa28.98■■■□□ 2.23
VEGFA-208ENST00000417285 ADAM17P78536 824 aa28.98■■■□□ 2.23
VEGFA-208ENST00000417285 TJAP1Q5JTD0 557 aa28.98■■■□□ 2.23
VEGFA-208ENST00000417285 TRIM50Q86XT4 487 aa28.98■■■□□ 2.23
VEGFA-208ENST00000417285 JAKMIP1Q96N16 626 aaKnown RBP28.98■■■□□ 2.23
VEGFA-208ENST00000417285 BARHL2Q9NY43 387 aa28.98■■■□□ 2.23
VEGFA-208ENST00000417285 GJB5O95377 273 aa28.97■■■□□ 2.23
VEGFA-208ENST00000417285 DBF4BQ8NFT6 615 aa28.97■■■□□ 2.23
VEGFA-208ENST00000417285 MXRA8Q9BRK3 442 aa28.97■■■□□ 2.23
VEGFA-208ENST00000417285 SMARCAD1Q9H4L7 1026 aa28.97■■■□□ 2.23
VEGFA-208ENST00000417285 FAM217BQ9NTX9 383 aaPredicted RBP28.97■■■□□ 2.23
VEGFA-208ENST00000417285 ERAP1Q9NZ08 941 aa28.97■■■□□ 2.23
VEGFA-208ENST00000417285 NAP1L2Q9ULW6 460 aaPredicted RBP28.97■■■□□ 2.23
VEGFA-208ENST00000417285 TELO2Q9Y4R8 837 aa28.97■■■□□ 2.23
VEGFA-208ENST00000417285 SNX14Q9Y5W7 946 aa28.97■■■□□ 2.23
VEGFA-208ENST00000417285 GBF1Q92538 1859 aa28.97■■■□□ 2.23
VEGFA-208ENST00000417285 GSTTP1A0A1W2PQM5 241 aa28.96■■■□□ 2.23
VEGFA-208ENST00000417285 SMCO2A6NFE2 343 aa28.96■■■□□ 2.23
VEGFA-208ENST00000417285 DEFB103AP81534 67 aa28.96■■■□□ 2.23
VEGFA-208ENST00000417285 ARHGAP4P98171 946 aa28.96■■■□□ 2.23
VEGFA-208ENST00000417285 TCTN1Q2MV58 587 aa28.96■■■□□ 2.23
VEGFA-208ENST00000417285 PLEKHG4Q58EX7 1191 aa28.96■■■□□ 2.23
VEGFA-208ENST00000417285 BLOC1S2Q6QNY1 142 aa28.96■■■□□ 2.23
VEGFA-208ENST00000417285 ARNTL2Q8WYA1 636 aa28.96■■■□□ 2.23
VEGFA-208ENST00000417285 SEPT8Q92599 483 aa28.96■■■□□ 2.23
VEGFA-208ENST00000417285 CERS4Q9HA82 394 aa28.96■■■□□ 2.23
VEGFA-208ENST00000417285 KCNH7Q9NS40 1196 aa28.96■■■□□ 2.23
VEGFA-208ENST00000417285 STXBP3O00186 592 aa28.95■■■□□ 2.22
VEGFA-208ENST00000417285 AMHP03971 560 aa28.95■■■□□ 2.22
VEGFA-208ENST00000417285 TYW1BQ6NUM6 668 aa28.95■■■□□ 2.22
VEGFA-208ENST00000417285 FBXL16Q8N461 479 aa28.95■■■□□ 2.22
VEGFA-208ENST00000417285 LMBR1Q8WVP7 490 aa28.95■■■□□ 2.22
VEGFA-208ENST00000417285 GLG1Q92896 1179 aa28.95■■■□□ 2.22
VEGFA-208ENST00000417285 TNPO1Q92973 898 aaKnown RBP28.95■■■□□ 2.22
VEGFA-208ENST00000417285 THEGQ9P2T0 379 aa28.95■■■□□ 2.22
VEGFA-208ENST00000417285 VCANP13611 3396 aa28.95■■■□□ 2.22
VEGFA-208ENST00000417285 CPA1P15085 419 aa28.94■■■□□ 2.22
VEGFA-208ENST00000417285 CDC27P30260 824 aa28.94■■■□□ 2.22
VEGFA-208ENST00000417285 METAP2P50579 478 aaKnown RBP eCLIP28.94■■■□□ 2.227e-12■□□□□ 8.9
VEGFA-208ENST00000417285 AP3B2Q13367 1082 aa28.94■■■□□ 2.22
VEGFA-208ENST00000417285 CEP55Q53EZ4 464 aa28.94■■■□□ 2.22
VEGFA-208ENST00000417285 FAM26DQ5JW98 314 aa28.94■■■□□ 2.22
VEGFA-208ENST00000417285 TAF2Q6P1X5 1199 aa28.94■■■□□ 2.22
VEGFA-208ENST00000417285 Q6ZUG5 572 aa28.94■■■□□ 2.22
VEGFA-208ENST00000417285 RPAINQ86UA6 219 aa28.94■■■□□ 2.22
VEGFA-208ENST00000417285 PRDM6Q9NQX0 595 aa28.94■■■□□ 2.22
VEGFA-208ENST00000417285 MTCH2Q9Y6C9 303 aa28.94■■■□□ 2.22
VEGFA-208ENST00000417285 RFXAPO00287 272 aa28.93■■■□□ 2.22
VEGFA-208ENST00000417285 PSMA5P28066 241 aa28.93■■■□□ 2.22
VEGFA-208ENST00000417285 ADD1P35611 737 aaKnown RBP28.93■■■□□ 2.22
VEGFA-208ENST00000417285 MRPS5P82675 430 aaKnown RBP28.93■■■□□ 2.22
VEGFA-208ENST00000417285 MCTP2Q6DN12 878 aa28.93■■■□□ 2.22
VEGFA-208ENST00000417285 TMCO2Q7Z6W1 182 aaPredicted RBP28.93■■■□□ 2.22
VEGFA-208ENST00000417285 RSPH3Q86UC2 560 aa28.93■■■□□ 2.22
VEGFA-208ENST00000417285 SDF4Q9BRK5 362 aa28.93■■■□□ 2.22
VEGFA-208ENST00000417285 ANO3Q9BYT9 981 aa28.93■■■□□ 2.22
VEGFA-208ENST00000417285 JPH1Q9HDC5 661 aaPredicted RBP28.93■■■□□ 2.22
VEGFA-208ENST00000417285 PKD2L1Q9P0L9 805 aa28.93■■■□□ 2.22
VEGFA-208ENST00000417285 SLC9A2Q9UBY0 812 aa28.93■■■□□ 2.22
VEGFA-208ENST00000417285 INSL6Q9Y581 213 aa28.93■■■□□ 2.22
VEGFA-208ENST00000417285 EPB41L2O43491 1005 aaKnown RBP28.92■■■□□ 2.22
VEGFA-208ENST00000417285 PPFIA1Q13136 1202 aa28.92■■■□□ 2.22
VEGFA-208ENST00000417285 PFKFB3Q16875 520 aaPredicted RBP28.92■■■□□ 2.22
VEGFA-208ENST00000417285 APBB2Q92870 758 aa28.92■■■□□ 2.22
VEGFA-208ENST00000417285 AZI2Q9H6S1 392 aa28.92■■■□□ 2.22
VEGFA-208ENST00000417285 NFASCO94856 1347 aa28.92■■■□□ 2.22
VEGFA-208ENST00000417285 MEIS1O00470 390 aa28.91■■■□□ 2.22
VEGFA-208ENST00000417285 ARHGEF15O94989 841 aa28.91■■■□□ 2.22
VEGFA-208ENST00000417285 RPS6KB1P23443 525 aa28.91■■■□□ 2.22
VEGFA-208ENST00000417285 SREBF1P36956 1147 aa28.91■■■□□ 2.22
VEGFA-208ENST00000417285 APOBRQ0VD83 1088 aa28.91■■■□□ 2.22
VEGFA-208ENST00000417285 MKRN4PQ13434 485 aaPredicted RBP28.91■■■□□ 2.22
VEGFA-208ENST00000417285 LIN28BQ6ZN17 250 aaKnown RBP eCLIP28.91■■■□□ 2.225e-35■■■□□ 16.9
VEGFA-208ENST00000417285 CYP2W1Q8TAV3 490 aa28.91■■■□□ 2.22
VEGFA-208ENST00000417285 BRF1Q92994 677 aa28.91■■■□□ 2.22
VEGFA-208ENST00000417285 ASB2Q96Q27 587 aa28.91■■■□□ 2.22
VEGFA-208ENST00000417285 LCHNA4D1U4 455 aa28.9■■■□□ 2.22
VEGFA-208ENST00000417285 EPOPA6NHQ4 379 aa28.9■■■□□ 2.22
VEGFA-208ENST00000417285 RRN3P2A6NIE6 340 aa28.9■■■□□ 2.22
VEGFA-208ENST00000417285 RPLP2P05387 115 aaKnown RBP28.9■■■□□ 2.22
VEGFA-208ENST00000417285 CTSHP09668 335 aa28.9■■■□□ 2.22
VEGFA-208ENST00000417285 SCG2P13521 617 aa28.9■■■□□ 2.22
VEGFA-208ENST00000417285 CLK2P49760 499 aaKnown RBP28.9■■■□□ 2.22
VEGFA-208ENST00000417285 GRIK4Q16099 956 aa28.9■■■□□ 2.22
VEGFA-208ENST00000417285 NIPA1Q7RTP0 329 aa28.9■■■□□ 2.22
VEGFA-208ENST00000417285 MICALL1Q8N3F8 863 aa28.9■■■□□ 2.22
VEGFA-208ENST00000417285 CCDC12Q8WUD4 166 aaPredicted RBP28.9■■■□□ 2.22
VEGFA-208ENST00000417285 TGS1Q96RS0 853 aaKnown RBP28.9■■■□□ 2.22
VEGFA-208ENST00000417285 PPP4R2Q9NY27 417 aa28.9■■■□□ 2.22
VEGFA-208ENST00000417285 LMCD1Q9NZU5 365 aa28.9■■■□□ 2.22
VEGFA-208ENST00000417285 ZNF76P36508 570 aa28.89■■■□□ 2.22
VEGFA-208ENST00000417285 ERVK-21P61565 698 aa28.89■■■□□ 2.22
VEGFA-208ENST00000417285 ERICH6BQ5W0A0 696 aa28.89■■■□□ 2.22
VEGFA-208ENST00000417285 ESYT2A0FGR8 921 aa28.88■■■□□ 2.21
VEGFA-208ENST00000417285 MBLAC1A4D2B0 266 aaPredicted RBP28.88■■■□□ 2.21
VEGFA-208ENST00000417285 PRPF3O43395 683 aaKnown RBP28.88■■■□□ 2.21
VEGFA-208ENST00000417285 ARP10275 920 aa28.88■■■□□ 2.21
VEGFA-208ENST00000417285 MARK3P27448 753 aa28.88■■■□□ 2.21
VEGFA-208ENST00000417285 FAM117BQ6P1L5 589 aa28.88■■■□□ 2.21
VEGFA-208ENST00000417285 PLPPR4Q7Z2D5 763 aa28.88■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms