RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 MORC2Q9Y6X9 1032 aaPredicted RBP13.01□□□□□ -0.33
UBR4-205ENST00000417040 GCC2Q8IWJ2 1684 aa13.01□□□□□ -0.33
UBR4-205ENST00000417040 GUCY1A3Q02108 690 aa13.01□□□□□ -0.33
UBR4-205ENST00000417040 CERKLQ49MI3 558 aaPredicted RBP13.01□□□□□ -0.33
UBR4-205ENST00000417040 OSBPL3Q9H4L5 887 aa13.01□□□□□ -0.33
UBR4-205ENST00000417040 PCDHA1Q9Y5I3 950 aa13.01□□□□□ -0.33
UBR4-205ENST00000417040 ZNF211Q13398 564 aaPredicted RBP13.01□□□□□ -0.33
UBR4-205ENST00000417040 ZBTB38Q8NAP3 1195 aaPredicted RBP13.01□□□□□ -0.33
UBR4-205ENST00000417040 SAYSD1Q9NPB0 183 aa13.01□□□□□ -0.33
UBR4-205ENST00000417040 MYOM2P54296 1465 aa13.01□□□□□ -0.33
UBR4-205ENST00000417040 ZNF185O15231 689 aa13.01□□□□□ -0.33
UBR4-205ENST00000417040 PLEKHA8P1O95397 391 aa13.01□□□□□ -0.33
UBR4-205ENST00000417040 SCARA5Q6ZMJ2 495 aa13.01□□□□□ -0.33
UBR4-205ENST00000417040 EXT2Q93063 718 aa13.01□□□□□ -0.33
UBR4-205ENST00000417040 DYNLL2Q96FJ2 89 aa13.01□□□□□ -0.33
UBR4-205ENST00000417040 OSBPL1AQ9BXW6 950 aa13.01□□□□□ -0.33
UBR4-205ENST00000417040 GYG2O15488 501 aa13□□□□□ -0.33
UBR4-205ENST00000417040 TRIM37O94972 964 aa13□□□□□ -0.33
UBR4-205ENST00000417040 OATP04181 439 aa13□□□□□ -0.33
UBR4-205ENST00000417040 RYBPQ8N488 228 aaPredicted RBP13□□□□□ -0.33
UBR4-205ENST00000417040 ZNF577Q9BSK1 485 aa13□□□□□ -0.33
UBR4-205ENST00000417040 DCTN4Q9UJW0 460 aa13□□□□□ -0.33
UBR4-205ENST00000417040 HNRNPDLO14979 420 aaKnown RBP13□□□□□ -0.33
UBR4-205ENST00000417040 OSTNP61366 133 aa13□□□□□ -0.33
UBR4-205ENST00000417040 RNASELQ05823 741 aaKnown RBP13□□□□□ -0.33
UBR4-205ENST00000417040 SAAL1Q96ER3 474 aa13□□□□□ -0.33
UBR4-205ENST00000417040 HAUS2Q9NVX0 235 aa13□□□□□ -0.33
UBR4-205ENST00000417040 ZFP69BQ9UJL9 534 aa13□□□□□ -0.33
UBR4-205ENST00000417040 ABCC2Q92887 1545 aa13□□□□□ -0.33
UBR4-205ENST00000417040 SPAG7O75391 227 aa13□□□□□ -0.33
UBR4-205ENST00000417040 STX1BP61266 288 aa13□□□□□ -0.33
UBR4-205ENST00000417040 MTF1Q14872 753 aa13□□□□□ -0.33
UBR4-205ENST00000417040 EMILIN3Q9NT22 766 aa13□□□□□ -0.33
UBR4-205ENST00000417040 PI4K2BG5E9Z4 385 aa13□□□□□ -0.33
UBR4-205ENST00000417040 LMNB2Q03252 620 aa13□□□□□ -0.33
UBR4-205ENST00000417040 SLMAPQ14BN4 828 aa13□□□□□ -0.33
UBR4-205ENST00000417040 USP17L2Q6R6M4 530 aa13□□□□□ -0.33
UBR4-205ENST00000417040 DNAAF3Q8N9W5 541 aa13□□□□□ -0.33
UBR4-205ENST00000417040 IWS1Q96ST2 819 aa13□□□□□ -0.33
UBR4-205ENST00000417040 UBN2Q6ZU65 1347 aa13□□□□□ -0.33
UBR4-205ENST00000417040 TEX33O43247 280 aa13□□□□□ -0.33
UBR4-205ENST00000417040 ATP1A1P05023 1023 aaKnown RBP13□□□□□ -0.33
UBR4-205ENST00000417040 SPOPLQ6IQ16 392 aa13□□□□□ -0.33
UBR4-205ENST00000417040 SYT2Q8N9I0 419 aaPredicted RBP13□□□□□ -0.33
UBR4-205ENST00000417040 HAUS8Q9BT25 410 aa13□□□□□ -0.33
UBR4-205ENST00000417040 MCF2LO15068 1137 aa12.99□□□□□ -0.33
UBR4-205ENST00000417040 ADCY2Q08462 1091 aa12.99□□□□□ -0.33
UBR4-205ENST00000417040 PRPSAP1Q14558 356 aa12.99□□□□□ -0.33
UBR4-205ENST00000417040 CHMP6Q96FZ7 201 aa12.99□□□□□ -0.33
UBR4-205ENST00000417040 PPARGC1AQ9UBK2 798 aaKnown RBP12.99□□□□□ -0.33
UBR4-205ENST00000417040 SSTR3P32745 418 aaPredicted RBP12.99□□□□□ -0.33
UBR4-205ENST00000417040 CDO1Q16878 200 aa12.99□□□□□ -0.33
UBR4-205ENST00000417040 MDH1BQ5I0G3 518 aa12.99□□□□□ -0.33
UBR4-205ENST00000417040 SLFN13Q68D06 897 aa12.99□□□□□ -0.33
UBR4-205ENST00000417040 GALNT17Q6IS24 598 aa12.99□□□□□ -0.33
UBR4-205ENST00000417040 NOP9Q86U38 636 aaKnown RBP12.99□□□□□ -0.33
UBR4-205ENST00000417040 FOXN1O15353 648 aa12.99□□□□□ -0.33
UBR4-205ENST00000417040 BIRC2Q13490 618 aa12.99□□□□□ -0.33
UBR4-205ENST00000417040 GMNCA6NCL1 334 aa12.99□□□□□ -0.33
UBR4-205ENST00000417040 LRRC53A6NM62 1247 aa12.99□□□□□ -0.33
UBR4-205ENST00000417040 ADD2P35612 726 aa12.99□□□□□ -0.33
UBR4-205ENST00000417040 NECTIN1Q15223 517 aa12.99□□□□□ -0.33
UBR4-205ENST00000417040 KIAA0825Q8IV33 1275 aa12.99□□□□□ -0.33
UBR4-205ENST00000417040 PYROXD1Q8WU10 500 aa12.99□□□□□ -0.33
UBR4-205ENST00000417040 RNF26Q9BY78 433 aaPredicted RBP12.99□□□□□ -0.33
UBR4-205ENST00000417040 CACYBPQ9HB71 228 aaKnown RBP12.99□□□□□ -0.33
UBR4-205ENST00000417040 MYO1EQ12965 1108 aa12.99□□□□□ -0.33
UBR4-205ENST00000417040 CTTNQ14247 550 aaKnown RBP12.99□□□□□ -0.33
UBR4-205ENST00000417040 C16orf87Q6PH81 154 aa12.99□□□□□ -0.33
UBR4-205ENST00000417040 EPM2AIP1Q7L775 607 aaPredicted RBP12.99□□□□□ -0.33
UBR4-205ENST00000417040 ZBTB8OSQ8IWT0 167 aa12.99□□□□□ -0.33
UBR4-205ENST00000417040 CAPN11Q9UMQ6 739 aa12.99□□□□□ -0.33
UBR4-205ENST00000417040 USP17L3A6NCW0 530 aa12.98□□□□□ -0.33
UBR4-205ENST00000417040 USP17L4A6NCW7 530 aa12.98□□□□□ -0.33
UBR4-205ENST00000417040 RPS8P62241 208 aaKnown RBP12.98□□□□□ -0.33
UBR4-205ENST00000417040 USP17L1Q7RTZ2 530 aa12.98□□□□□ -0.33
UBR4-205ENST00000417040 CCDC68Q9H2F9 335 aa12.98□□□□□ -0.33
UBR4-205ENST00000417040 SEC31BQ9NQW1 1179 aa12.98□□□□□ -0.33
UBR4-205ENST00000417040 INSRP06213 1382 aa12.98□□□□□ -0.33
UBR4-205ENST00000417040 RASA4BC9J798 803 aa12.98□□□□□ -0.33
UBR4-205ENST00000417040 CHUKO15111 745 aa12.98□□□□□ -0.33
UBR4-205ENST00000417040 RASA4O43374 803 aa12.98□□□□□ -0.33
UBR4-205ENST00000417040 CUL1Q13616 776 aa12.98□□□□□ -0.33
UBR4-205ENST00000417040 PDCD2Q16342 344 aaPredicted RBP12.98□□□□□ -0.33
UBR4-205ENST00000417040 ARMC9Q7Z3E5 817 aa12.98□□□□□ -0.33
UBR4-205ENST00000417040 SRRM1Q8IYB3 904 aaKnown RBP12.98□□□□□ -0.33
UBR4-205ENST00000417040 ATP6V1E2Q96A05 226 aa12.98□□□□□ -0.33
UBR4-205ENST00000417040 WDR24Q96S15 920 aa12.98□□□□□ -0.33
UBR4-205ENST00000417040 HESX1Q9UBX0 185 aa12.98□□□□□ -0.33
UBR4-205ENST00000417040 PLXNC1O60486 1568 aa12.98□□□□□ -0.33
UBR4-205ENST00000417040 ICA1Q05084 483 aa12.98□□□□□ -0.33
UBR4-205ENST00000417040 SARM1Q6SZW1 724 aa12.98□□□□□ -0.33
UBR4-205ENST00000417040 PCGF5Q86SE9 256 aa12.98□□□□□ -0.33
UBR4-205ENST00000417040 LARGE2Q8N3Y3 721 aa12.98□□□□□ -0.33
UBR4-205ENST00000417040 TTC7AQ9ULT0 858 aaPredicted RBP12.98□□□□□ -0.33
UBR4-205ENST00000417040 LAMC3Q9Y6N6 1575 aa12.98□□□□□ -0.33
UBR4-205ENST00000417040 ASXL2Q76L83 1435 aa12.98□□□□□ -0.33
UBR4-205ENST00000417040 USP17L8P0C7I0 530 aa12.98□□□□□ -0.33
UBR4-205ENST00000417040 PLA2G4BP0C869 781 aa12.98□□□□□ -0.33
UBR4-205ENST00000417040 PMS2P54278 862 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms